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PangenomeTIGR4
serotype 4
D39serotype 2
D39Vserotype 2
Hungary19A-6serotype 19A
EF3030serotype 19F
670-6Bserotype 6B
6A-10serotype 6A
70585serotype 5
A026serotype 19F
A66serotype 3
AP200serotype 11A
ASP0581serotype 12F
ATCC 49619serotype 19F
ATCC 700669serotype 23F
BM6001serotype 19F
BVJ1JLserotype 1
CGSP14serotype 14
G54serotype 19F
HU-OHserotype 3
Hu15serotype 19A
Hu17serotype 19A
INV104serotype 1
INV200serotype 14
JJAserotype 14
MDRSPN001serotype 19F
NCTC7465serotype 1
NCTC7466serotype 2
NU83127serotype 4
OXC141serotype 3
P1031serotype 1
R6serotype 2
SP49serotype 19A
SPN032672serotype 1
SPN034156serotype 3
SPN034183serotype 3
SPN994038serotype 3
SPN994039serotype 3
SPNA45serotype 3
ST556serotype 19F
TCH8431/19Aserotype 19A
Taiwan19F-14serotype 19F
Xen35serotype 4
gamPNI0373serotype 1
⊟Summary[edit | edit source]
- pan ID?: PNEUPAN002783000
- symbol?: glnH6
- synonym:
- description?: amino acid ABC transporter substrate-binding protein
- amino acid ABC transporter substrate-binding protein
- ABC transporter substrate-binding protein - glutamine transport
- putative amino acid ABC transporter,extracellular amino acid-binding protein
- glutamine ABC transporter substrate-binding protein
- amino acid ABC transporter, amino acid-binding protein
- Arginine-binding extracellular protein ArtP
- ABC transporter, substrate-binding protein
- ABC transporter, substrate-binding protein, family 3
- ABC-type amino acid transport/signal transduction systems, periplasmic component/domain protein
- Glutamine ABC transporter substrate-binding protein GlnH6
- polar amino acid ABC uptake transporter substrate binding protein
descriptions from strain specific annotations:
- strand?: -
- coordinates?: 3666321..3667157
- occurrence?: in 100% of 43 strains
⊟Orthologs[edit | edit source]
⊟Genome Viewer[edit | edit source]
| TIGR4 | |
| D39 | |
| D39V | |
| Hungary19A-6 | |
| EF3030 |
⊟Alignments[edit | edit source]
- alignment of orthologues: CLUSTAL format alignment by MAFFT L-INS-i (v7.505)
TIGR4 MKKWMLVLVSLMTALFLVACGKNSSETSGDNWSKYQSNKSITIGFDSTFVPMGFAQKDGS
D39 MKKWMLVLVSLMTALFLVACGKNSSETSGDNWSKYQSNKSITIGFDSTFVPMGFAQKDGS
D39V MKKWMLVLVSLMTALFLVACGKNSSETSGDNWSKYQSNKSITIGFDSTFVPMGFAQKDGS
Hungary19A-6 MKKWMLVLVSLMTALFLVACGKNSSETSGDNWSKYQSNKSITIGFDSTFVPMGFAQKDGS
EF3030 MKKWMLVLVSLMTALFLVACGKNSSETSGDNWSKYQSNKSITIGFDSTFVPMGFAQKDGS
************************************************************
TIGR4 YAGFDIDLATAVFEKYGITVNWQPIDWDLKEAELTKGTIDLIWNGYSATDERREKVAFSN
D39 YAGFDIDLATAVFEKYGITVNWQPIDWDLKEAELTKGTIDLIWNGYSATDERREKVAFSN
D39V YAGFDIDLATAVFEKYGITVNWQPIDWDLKEAELTKGTIDLIWNGYSATDERREKVAFSN
Hungary19A-6 YAGFDIDLATAVFEKYGITVNWQPIDWDLKEAELTKGTIDLIWNGYSATDERREKVAFSN
EF3030 YAGFDIDLATAVFEKYGITVNWQPIDWDLKEAELTKGTIDLIWNGYSATDERREKVAFSN
************************************************************
TIGR4 SYMKNEQVLVTKKSSGITTAKDMTGKTLGAQAGSSGYADFEANPEILKNIVANKEANQYQ
D39 SYMKNEQVLVTKKSSGITTAKDMTGKTLGAQAGSSGYADFEANPEILKNIVANKEANQYQ
D39V SYMKNEQVLVTKKSSGITTAKDMTGKTLGAQAGSSGYADFEANPEILKNIVANKEANQYQ
Hungary19A-6 SYMKNEQVLVTKKSSGITTAKDMTGKTLGAQAGSSGYADFEANPEILKNIVANKEANQYQ
EF3030 SYMKNEQVLVTKKLSGITTAKDMTGKTLGAQAGSSGYADFEANPELLKNIVANKEANQYQ
************* *******************************:**************
TIGR4 TFNEALIDLKNDRIDGLLIDRVYANYYLEAEGVLNDYNVFTVGLETEAFAVGARKEDTNL
D39 TFNEALIDLKNDRIDGLLIDRVYANYYLEAEGVLNDYNVFTVGLETEAFAVGARKEDTNL
D39V TFNEALIDLKNDRIDGLLIDRVYANYYLEAEGVLNDYNVFTVGLETEAFAVGARKEDTNL
Hungary19A-6 TFNEALIDLKNDRIDGLLIDRVYANYYLEAEGVLNDYNVFTVGLETEAFAVGARKEDTTL
EF3030 TFNEALIDLKNDRIDGLLIDRVYANYYLEAEGVLNDYNVFTVGLETEAFAVGARKEDTTL
**********************************************************.*
TIGR4 VKKINEAFSSLYKDGKFQEISQKWFGEDVATKEVKEGQ
D39 VKKINEAFSSLYKDGKFQEISQKWFGEDVATKEVKEGQ
D39V VKKINEAFSSLYKDGKFQEISQKWFGEDVATKEVKEGQ
Hungary19A-6 VKKINEAFSSLYKDGKFQEISQKWFGEDVATKEVKEGQ
EF3030 VKKINEAFSSLYKDGKFQEISQKWFGEDVATKEVKEGQ
**************************************