Jump to navigation
Jump to search
PangenomeTIGR4
serotype 4
D39serotype 2
D39Vserotype 2
Hungary19A-6serotype 19A
EF3030serotype 19F
670-6Bserotype 6B
6A-10serotype 6A
70585serotype 5
A026serotype 19F
A66serotype 3
AP200serotype 11A
ASP0581serotype 12F
ATCC 49619serotype 19F
ATCC 700669serotype 23F
BVJ1JLserotype 1
CGSP14serotype 14
G54serotype 19F
HU-OHserotype 3
Hu15serotype 19A
Hu17serotype 19A
INV104serotype 1
INV200serotype 14
JJAserotype 14
MDRSPN001serotype 19F
NCTC7466serotype 2
NU83127serotype 4
OXC141serotype 3
P1031serotype 1
R6serotype 2
SP49serotype 19A
SPN032672serotype 1
SPN034156serotype 3
SPN034183serotype 3
SPN994038serotype 3
SPN994039serotype 3
SPNA45serotype 3
ST556serotype 19F
TCH8431/19Aserotype 19A
Taiwan19F-14serotype 19F
Xen35serotype 4
gamPNI0373serotype 1
⊟Summary[edit | edit source]
- pan ID?: PNEUPAN002798000
- symbol?: nfr1
- synonym:
- description?: NAD(P)H-dependent oxidoreductase
- NAD(P)H-dependent oxidoreductase
- NADPH-dependent fmn reductase domain protein
- oxidoreductase
- putative NADPH-dependent FMN reductase
- NADH-dependent flavin reductase subunit 1
- oxidoreductase, putative
- Fumarate reductase, flavoprotein subunit precursor
- NADPH-dependent FMN reductase
- putative NADPH-dependent FMN reductase (pseudogene)
- flavin reductase
- putative oxidoreductase
- putative phage head-tail adaptor
- sensory box protein
- Uncharacterized conserved protein
- pseudogene
descriptions from strain specific annotations:
- strand?: +
- coordinates?: 3591353..3592597
- occurrence?: in 100% of 41 strains
⊟Orthologs[edit | edit source]
⊟Genome Viewer[edit | edit source]
| TIGR4 | |
| D39 | |
| D39V | |
| Hungary19A-6 | |
| EF3030 |
⊟Alignments[edit | edit source]
- alignment of orthologues: CLUSTAL format alignment by MAFFT L-INS-i (v7.505)
TIGR4 MKFVGLVGSNYDQSYNRKLLEFIRRYFKLKFELEVLEIDEVPMFNQDEKWDESFQLRYLY
D39 MKFVGLVGSNYDQSYNRKLLEFIRRNFKFKFELEVLEIDEVPMFNQDEKWDESFQLRFLY
D39V MKFVGLVGSNYDQSYNRKLLEFIRRNFKFKFELEVLEIDEVPMFNQDEKWDESFQLRFLY
Hungary19A-6 MKFVGLVGSNYDQSYNRKLLEFIRRYFKLKFELEVLEIDEVPMFNQDEKWDESFQLRYLY
EF3030 MKFVGLVGSNYDQSYNRKLLEFIRRYFKLKFELEVLEIDEVPMFNQDEKWDESFQLRYLY
************************* **:****************************:**
TIGR4 NKITRADGVIIATPEHNHTISASLKSVLEWLSYEVHPFENKPVMIVGASYYDQGTSRAQV
D39 NKITRADGVIIATPEHNHTISASLKSVLEWLSYEVHPFENKPVMIVGASYYDQGTSRAQV
D39V NKITRADGVIIATPEHNHTISASLKSVLEWLSYEVHPFENKPVMIVGASYYDQGTSRAQV
Hungary19A-6 NKITRADGVIIATPEHNHTISVSLKSVLEWLSYEVHPFENKPVMIVGASYYDQGTSRAQV
EF3030 NKITRADGVIIATPEHNHTISASLKSVLEWLSYEVHPFENKPVMIVGASYYDQGTSRAQV
*********************.**************************************
TIGR4 HLRKILDAPGVNAYTLPGNEFLLGKAKEAFDNNGNITNEGTVKFLETCLDNFVKYVGVVS
D39 HLRKILDAPGVNAYTLPGNEFLLGKAKEAFDNNGNITNEGTVKFLETCLDNFVKYVGVVS
D39V HLRKILDAPGVNAYTLPGNEFLLGKAKEAFDNNGNITNEGTVKFLETCLDNFVKYVGVVS
Hungary19A-6 HLRKILDAPGVNAYTLPGNEFLLGKAKEAFDNNGNITNEGTVKFLETCLDNFVKYVGVVS
EF3030 HLRKILDAPGVNAYTLPGNEFLLGKAKEAFDNNGNITNEGTVKFLEICLDNFVKYVGVVS
********************************************** *************
TIGR4 KLKKPKPIESEDLDCGKPIATTITEVDPDDPEWVEKVAAFTGAVSGDTYVKLDHGILTVN
D39 KLKKPKPIESEDLDCGKPIATTITEVDPDDPEWVEKVAAITGAVSGDTYVKLDHGILTVN
D39V KLKKPKPIESEDLDCGKPIATTITEVDPDDPEWVEKVAAITGAVSGDTYVKLDHGILTVN
Hungary19A-6 KLKKPKPIESEDLDCGKPIATTITEVDPDDPEWVEKVAAITGAVSGDTYVKLDHGILTVN
EF3030 KLKKPKPIESEDLDCGKPIATTITEVDPDDPEWVEKVAAITGAVSGDTYVKLDHGILTVN
***************************************:********************
TIGR4 QIDMFLKAMPFELTYADDNNQFLYYNNAHQDPDTMFAKRVPPQSGSRMSTVHGSLPPARM
D39 QIDMFLKAMPFELTYADDNNQFLYYNNAHQDPDTMFAKRVPPQSGSRMSTVHGSLPPARM
D39V QIDMFLKAMPFELTYADDNNQFLYYNNAHQDPDTMFAKRVPPQSGSRMSTVHGSLPPARM
Hungary19A-6 QIDMFLKAMPFELTYADDNNQFLYYNNAHQDPDTMFAKRVPPQSGSRMSTVHGSLPPARM
EF3030 QIDMFLKAMPFELTYADDNNQFLYYNNAHQDPDTMFAKRVPPQSGSRMSTVHGSLPPARM
************************************************************
TIGR4 KNVEWVIGTLRNGNQEYVRTIVPGSPAGVINTHNYQAMYYPDGSYAGINEIVFNFQPWLD
D39 KNVEWVIGTLRNGNQEYVRTIVPGSPAGVINTHNYQAMYYPDGSYAGINEIVFNFQPWLD
D39V KNVEWVIGTLRNGNQEYVRTIVPGSPAGVINTHNYQAMYYPDGSYAGINEIVFNFQPWLD
Hungary19A-6 KNVEWVIGTLRNGNQEYVRTIVPGSPAGVINTHNYQAMYYPDGSYAGINEIVFNFQPWLD
EF3030 KNVEWVIGTLRNGNQEYVRTIVPGSPAGVINTHNYQAMYYPDGSYAGINEIVFNFQPWLD
************************************************************
TIGR4 WYLKETGQRLVGGSGPFAPAAGGHGDADATSGASDSGDAGGHGGDADATAGASY
D39 WYLKETGQRLVGGSGPFAPAAGGHGDADATSGASDSGDVGGHGGDADATAGASY
D39V WYLKETGQRLVGGSGPFAPAAGGHGDADATSGASDSGDVGGHGGDADATAGASY
Hungary19A-6 WYLKETGQRLVGGSGPFAPAAGGHGNADATSGASDSGDAGGHGGDADATAGASY
EF3030 WYLKETGQRLVGGSGPFAPAAGGHGDADATSGASDSGDAGGHGGDADATAGASY
*************************:************.***************