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PangenomeTIGR4
serotype 4
D39serotype 2
D39Vserotype 2
Hungary19A-6serotype 19A
EF3030serotype 19F
670-6Bserotype 6B
6A-10serotype 6A
70585serotype 5
A026serotype 19F
A66serotype 3
AP200serotype 11A
ASP0581serotype 12F
ATCC 49619serotype 19F
ATCC 700669serotype 23F
BVJ1JLserotype 1
CGSP14serotype 14
G54serotype 19F
HU-OHserotype 3
Hu15serotype 19A
Hu17serotype 19A
INV104serotype 1
INV200serotype 14
JJAserotype 14
MDRSPN001serotype 19F
NCTC7466serotype 2
NU83127serotype 4
OXC141serotype 3
P1031serotype 1
R6serotype 2
SP49serotype 19A
SPN032672serotype 1
SPN034156serotype 3
SPN034183serotype 3
SPN994038serotype 3
SPN994039serotype 3
SPNA45serotype 3
ST556serotype 19F
TCH8431/19Aserotype 19A
Taiwan19F-14serotype 19F
Xen35serotype 4
gamPNI0373serotype 1
⊟Summary[edit | edit source]
- pan ID?: PNEUPAN002881000
- symbol?: yaaA
- synonym:
- description?: peroxide stress protein YaaA
- peroxide stress protein YaaA
- conserved hypothetical protein
- UPF0246 protein YaaA
- protein YaaA
- Peroxide stress resistance protein YaaA
- Uncharacterized protein conserved in bacteria
- uncharacterized protein family UPF0246
- UPF0246 protein
- YaaA like protein
descriptions from strain specific annotations:
- strand?: -
- coordinates?: 3698030..3698758
- occurrence?: in 100% of 41 strains
⊟Orthologs[edit | edit source]
SPN034156:
SPN034156_RS02400 (yaaA)
SPN034183:
SPN034183_RS07350 (yaaA)
SPN994038:
SPN994038_RS07255 (yaaA)
⊟Genome Viewer[edit | edit source]
| TIGR4 | |
| D39 | |
| D39V | |
| Hungary19A-6 | |
| EF3030 |
⊟Alignments[edit | edit source]
- alignment of orthologues: CLUSTAL format alignment by MAFFT L-INS-i (v7.505)
TIGR4 MKILIPTAKEMNTDFPSIEAIPLKPESQAVLDALALYSASQLESFYKVSAEKAAEEFQNI
D39 MKILIPTAKEMNTDLPSIEAIPLKPESQTVLDALALYSASQLESFYKVSAEKAAEEFQNI
D39V MKILIPTAKEMNTDLPSIEAIPLKPESQTVLDALALYSASQLESFYKVSAEKAAEEFQNI
Hungary19A-6 MKILIPTAKEMNTDLPSIEAIPLKPESQAVLDALALYSASQLESFYKVSAEKAAEEFQNI
EF3030 MKILIPTAKEMNTDLPSIEAISLKPESQAVLDALALYSASQLESFYKVSAEKAAEEFQNI
**************:******.******:*******************************
TIGR4 QALKRQTAQHYPALKLFDGLMYRNIKRDKLTEAEQDYLENHVFITSALYGVVPVLSPMAP
D39 QALKRQTAQHYPALKLFDGLMYRNIKRDKLTEAEQDYLENHVFITSALYGVVPALSPMAP
D39V QALKRQTAQHYPALKLFDGLMYRNIKRDKLTEAEQDYLENHVFITSALYGVVPALSPMAP
Hungary19A-6 QALKRQTAQHYPALKLFDGLMYRNIKRDKLTEAEQDYLENHVFITSALYGVVPVLSPMAP
EF3030 QALKRQTTQHYPALKLFDGLMYRNIKRDKLTEAEQDYLENHVFITSALYGVVPALSPMAP
*******:*********************************************.******
TIGR4 HRLDFLMKLKVAGKTLKSHWKAAYDETLKKEEVIFSLLSSEFETVFSKEIRAKMVTFKFM
D39 HRLDFLMKLKVAGKTLKSHWKAVYDEALKKEEVIFSLLSSEFETVFSKEIRAKMVTFKFM
D39V HRLDFLMKLKVAGKTLKSHWKAVYDEALKKEEVIFSLLSSEFETVFSKEIRAKMVTFKFM
Hungary19A-6 HRLDFLMKLKVAGKTLKSHWKAAYDETLKKEEVIFSLLSSEFETVFSKEIRAKMVTFKFM
EF3030 HRLDFLMKLKVAGKTLKSHWKAVYDEALKKEEVIFSLLSSEFETVFSKEIRAKMVTFKFM
**********************.***:*********************************
TIGR4 EDRGGQLKIHSTISKKARGAFLTALIENQVQTVGEARRLNFAGFVYREDLSQPQGLVFVK
D39 EDRGGQLKIHSTISKKARGAFLTALIENQVQTVGEARRLNFAGFVYREDLSQPQGLVFVK
D39V EDRGGQLKIHSTISKKARGAFLTALIENQVQTVGEARRLNFAGFVYREDLSQPQGLVFVK
Hungary19A-6 EDRGGQLKIHSTISKKARGAFLTALIENQVQTVGEARRLNFAGFVYREDLSQPQGLVFVK
EF3030 EDRGGQLKIHSTISKKARGAFLTALIENQVQTVGEARRLNFAGFVYREDLSQPQGLVFVK
************************************************************
TIGR4 EV
D39 EV
D39V EV
Hungary19A-6 EV
EF3030 EV
**