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PangenomeTIGR4
serotype 4
D39serotype 2
D39Vserotype 2
Hungary19A-6serotype 19A
EF3030serotype 19F
670-6Bserotype 6B
6A-10serotype 6A
70585serotype 5
A026serotype 19F
A66serotype 3
AP200serotype 11A
ASP0581serotype 12F
ATCC 49619serotype 19F
ATCC 700669serotype 23F
BVJ1JLserotype 1
CGSP14serotype 14
G54serotype 19F
HU-OHserotype 3
Hu15serotype 19A
Hu17serotype 19A
INV104serotype 1
INV200serotype 14
JJAserotype 14
MDRSPN001serotype 19F
NCTC7466serotype 2
NU83127serotype 4
OXC141serotype 3
P1031serotype 1
R6serotype 2
SP49serotype 19A
SPN032672serotype 1
SPN034156serotype 3
SPN034183serotype 3
SPN994038serotype 3
SPN994039serotype 3
SPNA45serotype 3
ST556serotype 19F
TCH8431/19Aserotype 19A
Taiwan19F-14serotype 19F
Xen35serotype 4
gamPNI0373serotype 1
⊟Summary[edit | edit source]
- pan ID?: PNEUPAN002953000
- symbol?: clpX
- synonym:
- description?: ATP-dependent Clp protease ATP-binding subunit ClpX
- ATP-dependent Clp protease ATP-binding subunit ClpX
- ATP-dependent Clp protease, ATP-binding subunit ClpX
- ATP-dependent Clp protease ATP-binding subunit
- ATP-dependent protease
- ATP-dependent Clp protease ATP-binding subunit (class III heat-shock protein)
- ATP-dependent protease ATP-binding subunit
- ATP-dependent protease Clp, ATPase subunit
descriptions from strain specific annotations:
- strand?: -
- coordinates?: 3768048..3769280
- occurrence?: in 100% of 41 strains
⊟Orthologs[edit | edit source]
SPN034156:
SPN034156_RS02510 (clpX)
SPN034183:
SPN034183_RS07460 (clpX)
SPN994038:
SPN994038_RS07365 (clpX)
⊟Genome Viewer[edit | edit source]
| TIGR4 | |
| D39 | |
| D39V | |
| Hungary19A-6 | |
| EF3030 |
⊟Alignments[edit | edit source]
- alignment of orthologues: CLUSTAL format alignment by MAFFT L-INS-i (v7.505)
TIGR4 MSTNRKNDMMVYCSFCGKNQEEVQKIIAGNNAFICNECVELAQEIIREELVEEVLADLSE
D39 MSTNRKNDMMVYCSFCGKNQEEVQKIIAGNNAFICNECVELAQEIIREELVEEVLADLSE
D39V MSTNRKNDMMVYCSFCGKNQEEVQKIIAGNNAFICNECVELAQEIIREELVEEVLADLSE
Hungary19A-6 MPTNRNNDMMVYCSFCGKSQEEVQKIIAGNNAFICNECVELAQEIIREELAEEVLADLSE
EF3030 MSTNRKNDMMVYCSFCGKNQEEVQKIIAGNNAFICNECVELAQEIIREELVEEVLADLSE
*.***:************.*******************************.*********
TIGR4 VPKPIELLHILNHYVIGQDRAKRALAVAVYNHYKRINFHDTREESEDVDLQKSNILMIGP
D39 VPKPIELLHILNHYVIGQDRAKRALAVAVYNHYKRINFHDTREESEDVDLQKSNILMIGP
D39V VPKPIELLHILNHYVIGQDRAKRALAVAVYNHYKRINFHDTREESEDVDLQKSNILMIGP
Hungary19A-6 VPKPIELLHILNHYVIGQDRAKRALAVAVYNHYKRINFHDTREESEDVDLQKSNILMIGP
EF3030 VPKPIELLHILNHYVIGQDRAKRALAVAVYNHYKRINFHDTREESEDVDLQKSNILMIGP
************************************************************
TIGR4 TGSGKTFLAQTLAKSLNVPFAIADATALTEAGYVGEDVENILLKLLQVADFNIERAERGI
D39 TGSGKTFLAQTLAKSLNVPFAIADATALTEAGYVGEDVENILLKLLQVADFNIERAERGI
D39V TGSGKTFLAQTLAKSLNVPFAIADATALTEAGYVGEDVENILLKLLQVADFNIERAERGI
Hungary19A-6 TGSGKTFLAQTLAKSLNVPFAIADATALTEAGYVGEDVENILLKLLQAADFNIERAERGI
EF3030 TGSGKTFLAQTLAKSLNVPFAIADATALTEAGYVGEDVENILLKLLQVADFNIERAERGI
***********************************************.************
TIGR4 IYVDEIDKIAKKSENVSITRDVSGEGVQQALLKIIEGTVASVPPQGGRKHPQQEMIQVDT
D39 IYVDEIDKIAKKSENVSITRDVSGEGVQQALLKIIEGTVASVPPQGGRKHPQQEMIQVDT
D39V IYVDEIDKIAKKSENVSITRDVSGEGVQQALLKIIEGTVASVPPQGGRKHPQQEMIQVDT
Hungary19A-6 IYVDEIDKIAKKSENVSITRDVSGEGVQQALLKIIEGTVASVPPQGGRKHPQQEMIQVDT
EF3030 IYVDEIDKIAKKNENVSITRDVSGEGVQQALLKIIEGTVASVPPQGGRKHPQQEMIQVDT
************.***********************************************
TIGR4 KNILFIVGGAFDGIEEIVKQRLGEKVIGFGQNNKAIDENSSYMQEIIAEDIQKFGIIPEL
D39 KNILFIVGGAFDGIEEIVKQRLGEKVIGFGQNNKAIDENSSYMQEIIAEDIQKFGIIPEL
D39V KNILFIVGGAFDGIEEIVKQRLGEKVIGFGQNNKAIDENSSYMQEIIAEDIQKFGIIPEL
Hungary19A-6 KNILFIVGGAFDGIEEIVKQRLGEKVIGFGQNNKAIDENSSYMQEIIAEDIQKFGIIPEL
EF3030 KNILFIVGGAFDGIEEIVKQRLGEKVIGFGQNNKAIDENSSYMQEIIAEDIQKFGIIPEL
************************************************************
TIGR4 IGRLPVFAALEQLTVDDLVRILKEPRNALVKQYQTLLSYDDVELEFDDEALQEIANKAIE
D39 IGRLPVFAALEQLTVDDLVRILKEPRNALVKQYQTLLSYDDVELEFDDEALQEIANKAIE
D39V IGRLPVFAALEQLTVDDLVRILKEPRNALVKQYQTLLSYDDVELEFDDEALQEIANKAIE
Hungary19A-6 IGRLPVFAALEQLTVDDLVRILKEPRNALVKQYQTLLSYDDVELEFDDEALQEIANKAIE
EF3030 IGRLPVFAALEQLTVDDLVRILKEPRNALVKQYQTLLSYDDVELEFDDEALQEIANKAIE
************************************************************
TIGR4 RKTGARGLRSIIEETMLDVMFEVPSQENVKLVRITKETVDGTDKPILETA
D39 RKTGARGLRSIIEETMLDVMFEVPSQENVKLVRITKETVDGTDKPILETA
D39V RKTGARGLRSIIEETMLDVMFEVPSQENVKLVRITKETVDGTDKPILETA
Hungary19A-6 RKTGARGLRSIIEETMLDVMFEVPSQENVKLVRITKEAVDGTDKPILETA
EF3030 RKTGARGLRSIIEETMLDVMFEVPSQENVKLVRITKETVDGTDKPILETA
*************************************:************