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PangenomeTIGR4
serotype 4
D39serotype 2
D39Vserotype 2
Hungary19A-6serotype 19A
EF3030serotype 19F
670-6Bserotype 6B
6A-10serotype 6A
70585serotype 5
A026serotype 19F
A66serotype 3
AP200serotype 11A
ASP0581serotype 12F
ATCC 49619serotype 19F
ATCC 700669serotype 23F
BM6001serotype 19F
BVJ1JLserotype 1
CGSP14serotype 14
G54serotype 19F
HU-OHserotype 3
Hu15serotype 19A
Hu17serotype 19A
INV104serotype 1
INV200serotype 14
JJAserotype 14
MDRSPN001serotype 19F
NCTC7465serotype 1
NCTC7466serotype 2
NU83127serotype 4
OXC141serotype 3
P1031serotype 1
R6serotype 2
SP49serotype 19A
SPN032672serotype 1
SPN034156serotype 3
SPN034183serotype 3
SPN994038serotype 3
SPN994039serotype 3
SPNA45serotype 3
ST556serotype 19F
TCH8431/19Aserotype 19A
Taiwan19F-14serotype 19F
Xen35serotype 4
gamPNI0373serotype 1
⊟Summary[edit | edit source]
- pan ID?: PNEUPAN003013000
- symbol?: ybgI
- synonym:
- description?: Nif3-like dinuclear metal center hexameric protein
- Nif3-like dinuclear metal center hexameric protein
- NIF3 (NGG1p interacting factor 3) family protein
- conserved hypothetical protein
- GTP cyclohydrolase 1 type 2
- conserved hypothetical protein TIGR00486
- dinuclear metal center protein, YbgI family
- GTP cyclohydrolase 1 type 2 homolog
- NIF3-like protein
- Putative GTP cyclohydrolase 1 type 2 protein YbgI
- Uncharacterized conserved protein
descriptions from strain specific annotations:
- strand?: -
- coordinates?: 3917276..3918073
- occurrence?: in 100% of 43 strains
⊟Orthologs[edit | edit source]
⊟Genome Viewer[edit | edit source]
| TIGR4 | |
| D39 | |
| D39V | |
| Hungary19A-6 | |
| EF3030 |
⊟Alignments[edit | edit source]
- alignment of orthologues: CLUSTAL format alignment by MAFFT L-INS-i (v7.505)
TIGR4 MLASEVIQAYEAFCPQEFSMEGDSRGLQIGTLDKGIQRVMVALDIREETVAEAIEKGVDL
D39 MLASEVIQAYEAFCPQEFSMEGDSCGLQIGTLDKGIQRVMVALDIREETVAEAIEKGVDL
D39V MLASEVIQAYEAFCPQEFSMEGDSCGLQIGTLDKGIQRVMVALDIREETVAEAIEKGVDL
Hungary19A-6 MLASEVIKRYEAFCPQEFSMEGDSRGLQIGTLDKGIQRVMVALDIREETVTEAIEKGVDL
EF3030 MLASEVIQAYEAFCPQEFSMEGDSRGLQIGTLDKGIQRVMVALDIREETVAEAIEKGVDL
*******: *************** *************************:*********
TIGR4 IIVKHAPIFRPIKDLLASRPQNQIYIDLIKHDIAVYVSHTNIDIVENGLNDWFCQMLGIE
D39 IIVKHAPIFRPIKDLLASRPQNQIYIDLIKHDIAVYVSHTNIDIVENGLNDWFCQMLGIE
D39V IIVKHAPIFRPIKDLLASRPQNQIYIDLIKHDIAVYVSHTNIDIVENGLNDWFCQMLGIE
Hungary19A-6 IIVKHAPIFRPIKDLVASRPQNQIYIDLIKHDIAVYVSHTNIDIVENGLNDWFCQMLGIE
EF3030 IIVKHAPIFRPIKDLLASRPQNQIYIDLIKHDIAVYVSHTNIDIVENGLNDWFCQMLEIE
***************:***************************************** **
TIGR4 ETTYLQETGPERGIGRIGNIQPQTFWELAQQVKQVFDLDSLRMVHYQEDDLQKPISRVAI
D39 ETTYLQETGPERGIGRIGNIQPQTFWELAQQVKQVFDLDSLRMVHYQENDLQKPISRVAI
D39V ETTYLQETGPERGIGRIGNIQPQTFWELAQQVKQVFDLDSLRMVHYQENDLQKPISRVAI
Hungary19A-6 ETTYLQETGPERGIGRIGNVQSQTFWELTQQVKQVFGLDSLRMVHYQENDLQKPISRVAI
EF3030 ETTYLQETGPERGIGRIGNIQPQTFGELAQHVKQVFDLDSLRMVHYQENDLQKPISRVAI
*******************:*.*** **:*:*****.***********:***********
TIGR4 CGGSGQSFYKDALAKGADVYITGDIYYHTAQDMLSDGLLALDPGHYIEVIFVEKIAALLS
D39 CGGSGQSFYKDALAKGADVYITGDIYYHTAQDMLSDGLLALDPGHYIEVLFVEKIAALLT
D39V CGGSGQSFYKDALAKGADVYITGDIYYHTAQDMLSDGLLALDPGHYIEVLFVEKIAALLT
Hungary19A-6 CGGSGQSFYKDALAKGADVYITGDIYYHTAQDMLSDGLLALDPGHYIEVIFVEKIAALLS
EF3030 CGGSGQSFYKDALAKGADVYITGDIYYHTAQDMLSDGLLALDPGHYIEVLFVEKIAALLT
*************************************************:*********:
TIGR4 QWKEDKGWSIDILPSQASTNPFHHI
D39 QWKEKKGWELEILPSQASTNPFRHI
D39V QWKEKKGWELEILPSQASTNPFRHI
Hungary19A-6 QWKEDKGWSIDILPSQASTNPFHHI
EF3030 QWKEKKGWELEILPSQASTNPFRHI
****.***.::***********:**