PangenomeTIGR4

serotype 4

D39

serotype 2

D39V

serotype 2

Hungary19A-6

serotype 19A

EF3030

serotype 19F

670-6B

serotype 6B

6A-10

serotype 6A

70585

serotype 5

A026

serotype 19F

A66

serotype 3

AP200

serotype 11A

ASP0581

serotype 12F

ATCC 49619

serotype 19F

ATCC 700669

serotype 23F

BM6001

serotype 19F

BVJ1JL

serotype 1

CGSP14

serotype 14

G54

serotype 19F

HU-OH

serotype 3

Hu15

serotype 19A

Hu17

serotype 19A

INV104

serotype 1

INV200

serotype 14

JJA

serotype 14

MDRSPN001

serotype 19F

NCTC7465

serotype 1

NCTC7466

serotype 2

NU83127

serotype 4

OXC141

serotype 3

P1031

serotype 1

R6

serotype 2

SP49

serotype 19A

SPN032672

serotype 1

SPN034156

serotype 3

SPN034183

serotype 3

SPN994038

serotype 3

SPN994039

serotype 3

SPNA45

serotype 3

ST556

serotype 19F

TCH8431/19A

serotype 19A

Taiwan19F-14

serotype 19F

Xen35

serotype 4

gamPNI0373

serotype 1

⊟Summary

• pan ID^?: PNEUPAN003040000
• symbol^?: thrS
• synonym:
• description^?: threonine--tRNA ligase

  descriptions from strain specific annotations:

  • threonine--tRNA ligase
  • threonyl-tRNA synthetase
  • threonyl-tRNA synthase
  • threonyl-tRNA synthetase (thrS)
  • Threonyl-tRNA synthetase 1
• strand^?: +
• coordinates^?: 3946395..3948338
• occurrence^?: in 100% of 43 strains

⊟Orthologs

(4)^?
TIGR4:
SP_RS08040 (thrS)
(2)
D39:
SPD_RS07680 (thrS)
(2)
D39V:
SPV_RS07675 (thrS)
(19A)
Hungary19A-6:
SPH_RS08470 (thrS)
(19F)
EF3030:
EF3030_RS07665 (thrS)
(6B)^?
670-6B:
SP670_RS08495 (thrS)
(6A)
6A-10:
HKM25_RS08170 (thrS)
(5)
70585:
SP70585_RS08285 (thrS)
(19F)
A026:
T308_RS07570 (thrS)
(3)
A66:
A66_RS07275 (thrS)
(11A)
AP200:
SPAP_RS08090 (thrS)
(12F)
ASP0581:
EL334_RS08320 (thrS)
(19F)
ATCC 49619:
EL263_RS07880 (thrS)
(23F)
ATCC 700669:
SPN23F_RS08225 (thrS)
(19F)
BM6001:
ODS73_RS08580 (thrS)
(1)
BVJ1JL:
JN057_RS07875 (thrS)
(14)
CGSP14:
SPCG_RS08295 (thrS)
(19F)
G54:
SPG_RS07685 (thrS)
(1)
gamPNI0373:
HMPREF1038_RS07900 (thrS)
(3)
HU-OH:
EL271_RS07990 (thrS)
(19A)
Hu15:
SPNHU15_RS00460 (thrS)
(19A)
Hu17:
SPNHU17_RS07755 (thrS)
(1)
INV104:
INV104_RS07950 (thrS)
(14)
INV200:
SPNINV200_RS07750 (thrS)
(14)
JJA:
SPJ_RS07545 (thrS)
(19F)
MDRSPN001:
MDRSPN_RS07080 (thrS)
(1)
NCTC7465:
AT689_RS06000 (thrS)
(2)
NCTC7466:
DQM66_RS07675 (thrS)
(4)
NU83127:
EL277_RS08110 (thrS)
(3)
OXC141:
SPNOXC_RS07740 (thrS)
(1)
P1031:
SPP_RS08115 (thrS)
(2)
R6:
SPR_RS07320 (thrS)
(19A)
SP49:
BMJ42_RS08670 (thrS)
(1)
SPN032672:
SPN032672_RS02835 (thrS)
(3)
SPN034156:
SPN034156_RS02815 (thrS)
(3)
SPN034183:
SPN034183_RS07760 (thrS)
(3)
SPN994038:
SPN994038_RS07665 (thrS)
(3)
SPN994039:
SPN994039_RS07670 (thrS)
(3)
SPNA45:
SPNA45_RS03495 (thrS)
(19F)
ST556:
MYY_RS08005 (thrS)
(19F)
Taiwan19F-14:
SPT_RS07795 (thrS)
(19A)
TCH8431/19A:
HMPREF0837_RS08940 (thrS)
(4)
Xen35:
CXP32_RS08130 (thrS)

⊟Genome Viewer

TIGR4
D39
D39V
Hungary19A-6
EF3030

⊟Alignments

• alignment of orthologues:
  CLUSTAL format alignment by MAFFT L-INS-i (v7.505)
  
  
  TIGR4           MINITFPDGAVREFESGVTTFEIAQSISNSLAKKALAGKFNGKLIDTTRAITEDGSIEIV
  D39             MINITFPDGAVREFESGVTTFEIAQSISNSLAKKALAGKFNGKLIDTTRAITEDGSIEIV
  D39V            MINITFPDGAVREFESGVTTFEIAQSISNSLAKKALAGKFNGKLIDTTRAITEDGSIEIV
  Hungary19A-6    MINITFPDGAVREFESGVTTFEIAQSISNSLAKKALAGKFNGKLIDTTRAITEDGSIEIV
  EF3030          MINITFPDGAVREFESGVTTFEIAQSISNSLAKKALAGKFNGKLIDTTRAITEDGSIEIV
                  ************************************************************
  
  TIGR4           TPDHEDALPILRHSAAHLFAQAARRLFPDIHLGVGPAIEDGFYYDTDNTAGQISNEDLPR
  D39             TPDHEDALPILRHSATHLFAQAARRLFPDIHLGVGPAIEDGFYYDTDHTAGQISNEDLPR
  D39V            TPDHEDALPILRHSATHLFAQAARRLFPDIHLGVGPAIEDGFYYDTDHTAGQISNEDLPR
  Hungary19A-6    TPDHEDALPILRHSAAHLFAQAARRLFPDIHLGVGPAIEDGFYYDTDNTAGQISNEDLPR
  EF3030          TPDHEDALPILRHSAAHLFAQAARRLFPDIHLGVGPAIEDGFYYDTDNTAGQISNEDLPR
                  ***************:*******************************:************
  
  TIGR4           IEEEMQKIVKENFPSIREEVTKDEAREIFKNDPYKLELIEEHSEDEGGLTIYRQGEYVDL
  D39             IEEEMQKIVKENFPSIREEVTKDEAREIFKNDPYKLELIEEHSEDEGGLTIYRQGEYVDL
  D39V            IEEEMQKIVKENFPSIREEVTKDEAREIFKNDPYKLELIEEHSEDEGGLTIYRQGEYVDL
  Hungary19A-6    IEEEMQKIVKENFPSIREEVTKDEAREIFKNDPYKLELIEEHSEDEGGLTIYRQGEYVDL
  EF3030          IEEEMQKIVKENFPSIREEVTKDEAREIFKNDPYKLELIEEHSEDEGGLTIYRQGEYVDL
                  ************************************************************
  
  TIGR4           CRGPHVPSTGRIQIFHLLHVAGAYWRGNSDNAMMQRIYGTAWFDKKDLKNYLQMREEAKE
  D39             CRGPHVPSTGRIQIFHLLHVAGAYWRGNSDNAMMQRIYGTAWFDKKDLKNYLQMREEAKE
  D39V            CRGPHVPSTGRIQIFHLLHVAGAYWRGNSDNAMMQRIYGTAWFDKKDLKNYLQMREEAKE
  Hungary19A-6    CRGPHVPSTGRIQIFHLLHVAGAYWRGNSDNAMMQRIYGTAWFDKKDLKNYLQMREEAKE
  EF3030          CRGPHVPSTGRIQIFHLLHVAGAYWRGNSDNAMMQRIYGTAWFDKKDLKNYLQMREEAKE
                  ************************************************************
  
  TIGR4           RDHRKLGKELDLFMISQEVGQGLPFWLPNGATIRRELERYIVNKELVSGYQHVYTPPLAS
  D39             RDHRKLGKELDLFMISQEVGQGLPFWLPNGATIRRELERYIVNKELVSGYQHVYTPPLAS
  D39V            RDHRKLGKELDLFMISQEVGQGLPFWLPNGATIRRELERYIVNKELVSGYQHVYTPPLAS
  Hungary19A-6    RDHRKLGKELDLFMISQEVGQGLPFWLPNGATIRRELERYIVNKELASGYQHVYTPPLAS
  EF3030          RDHRKLGKELDLFMISQEVGQGLPFWLPNGATIRRELERYIVNKELVSGYQHVYTPPLAS
                  **********************************************.*************
  
  TIGR4           VELYKTSGHWDHYQEDMFPTMDMGDGEEFVLRPMNCPHHIQVFKHHVHSYRELPIRIAEI
  D39             VELYKTSGHWDHYQEDMFPTMDMGDGEEFVLRPMNCPHHIQVFKHHVHSYRELPIRIAEI
  D39V            VELYKTSGHWDHYQEDMFPTMDMGDGEEFVLRPMNCPHHIQVFKHHVHSYRELPIRIAEI
  Hungary19A-6    VELYKTSGHWDHYQEDMFPTMDMGDGEEFVLRPMNCPHHIQVFKHHVHSYRELPIRIAEI
  EF3030          VELYKTSGHWDHYQEDMFPTMDMGDGEEFVLRPMNCPHHIQVFKHHVHSYRELPIRIAEI
                  ************************************************************
  
  TIGR4           GMMHRYEKSGALTGLQRVREMSLNDGHLFVTPEQIQEEFQRALQLIIDVYEDFNLTDYRF
  D39             GMMHRYEKSGALTGLQRVREMSLNDGHLFVTPEQIQEEFQRALQLIIDVYEDFNLTDYRF
  D39V            GMMHRYEKSGALTGLQRVREMSLNDGHLFVTPEQIQEEFQRALQLIIDVYEDFNLTDYRF
  Hungary19A-6    GMMHRYEKSGALTGLQRVREMSLNDGHLFVTPEQIQEEFQRALQLIIDVYEDFNLTDYRF
  EF3030          GMMHRYEKSGALTGLQRVREMSLNDGHLFVTPEQIQEEFQRALQLIIDVYEDFNLTDYRF
                  ************************************************************
  
  TIGR4           RLSLRDPQDTHKYFDNDEMWENAQTMLRAALDEMGVDYFEAEGEAAFYGPKLDIQIKTAL
  D39             RLSLRDPQDTHKYFDNDEMWENAQTMLRAALDEMGVDYFEAEGEAAFYGPKLDIQIKTAL
  D39V            RLSLRDPQDTHKYFDNDEMWENAQTMLRAALDEMGVDYFEAEGEAAFYGPKLDIQIKTAL
  Hungary19A-6    RLSLRDPQDTHKYFDNDEMWENAQTMLRAALDEMGVDYFEAEGEAAFYGPKLDIQIKTAL
  EF3030          RLSLRDPQDTHKYFDNDEMWENAQTMLRAALDEMGVDYFEAEGEAAFYGPKLDIQIKTAL
                  ************************************************************
  
  TIGR4           GKEETLSTIQLDFLLPERFDLKYIGADGEDHRPVMIHRGVISTMERFTAILIENYKGAFP
  D39             GKEETLSTIQLDFLLPERFDLKYIGADGEDHRPVMIHRGVISTMERFTAILIENYKGAFP
  D39V            GKEETLSTIQLDFLLPERFDLKYIGADGEDHRPVMIHRGVISTMERFTAILIENYKGAFP
  Hungary19A-6    GKEETLSTIQLDFLLPERFDLKYIGADGEDHRPVMIHRGVISTMERFTAILIENYKGAFP
  EF3030          GKEETLSTIQLDFLLPERFDLKYIGADGEDHRPVMIHRGVISTMERFTAILIENYKGAFP
                  ************************************************************
  
  TIGR4           TWLAPHQVTLIPVSNEKHVDYAWEVAKKLRDRGVRADVDERNEKMQFKIRASQTSKIPYQ
  D39             TWLAPHQVTLIPVSNEKHVDYAWEVAKKLRDRGVRADVDERNEKMQFKIRASQTSKIPYQ
  D39V            TWLAPHQVTLIPVSNEKHVDYAWEVAKKLRDRGVRADVDERNEKMQFKIRASQTSKIPYQ
  Hungary19A-6    TWLAPHQVTLIPVSNEKHVDYAWEVAKKLRDRGVRADVDERNEKMQFKIRASQTSKIPYQ
  EF3030          TWLAPHQVTLIPVSNEKHVDYAWEVAKKLRDRGVRADVDERNEKMQFKIRASQTSKIPYQ
                  ************************************************************
  
  TIGR4           LIVGDKEMEDETVNVRRYGQKETQTVSVDNFVQAILADIANKSRVEK
  D39             LIVGDKEMEDETVNVRRYGQKETQTVSVDNFVQAILADIANKSRVEK
  D39V            LIVGDKEMEDETVNVRRYGQKETQTVSVDNFVQAILADIANKSRVEK
  Hungary19A-6    LIVGDKEMEDETVNVRRYGQKETQTVSVDNFVQAILADIANKSRVEK
  EF3030          LIVGDKEMEDETVNVRRYGQKETQTVSVDNFVQAILADIANKSRVEK
                  ***********************************************