PangenomeTIGR4

serotype 4

D39

serotype 2

D39V

serotype 2

Hungary19A-6

serotype 19A

EF3030

serotype 19F

670-6B

serotype 6B

6A-10

serotype 6A

70585

serotype 5

A026

serotype 19F

A66

serotype 3

AP200

serotype 11A

ASP0581

serotype 12F

ATCC 49619

serotype 19F

ATCC 700669

serotype 23F

BM6001

serotype 19F

BVJ1JL

serotype 1

CGSP14

serotype 14

G54

serotype 19F

HU-OH

serotype 3

Hu15

serotype 19A

Hu17

serotype 19A

INV104

serotype 1

INV200

serotype 14

JJA

serotype 14

MDRSPN001

serotype 19F

NCTC7465

serotype 1

NCTC7466

serotype 2

NU83127

serotype 4

OXC141

serotype 3

P1031

serotype 1

R6

serotype 2

SP49

serotype 19A

SPN032672

serotype 1

SPN034156

serotype 3

SPN034183

serotype 3

SPN994038

serotype 3

SPN994039

serotype 3

SPNA45

serotype 3

ST556

serotype 19F

TCH8431/19A

serotype 19A

Taiwan19F-14

serotype 19F

Xen35

serotype 4

gamPNI0373

serotype 1

⊟Summary

• pan ID^?: PNEUPAN003069000
• symbol^?: —
• synonym:
• description^?: glycoside hydrolase family 95 protein

  descriptions from strain specific annotations:

  • glycoside hydrolase family 95 protein
  • conserved hypothetical protein
  • alpha-fucosidase
  • glycosyl hydrolase family 95 catalytic domain-containing protein
  • conserved hypothetical protein (pseudogene)
  • fibronectin
  • Putative large secreted protein
  • fibronectin type III domain protein
  • pseudogene
• strand^?: -
• coordinates^?: 3979971..3982713
• occurrence^?: in 100% of 43 strains

⊟Orthologs

(4)^?
TIGR4:
SP_RS08165
(2)
D39:
SPD_RS07800
(2)
D39V:
SPV_RS07795
(19A)
Hungary19A-6:
SPH_RS08580
(19F)
EF3030:
EF3030_RS11790
(6B)^?
670-6B:
SP670_RS08625
(6A)
6A-10:
HKM25_RS08275
(5)
70585:
SP70585_RS08400
(19F)
A026:
T308_RS07695
(3)
A66:
A66_RS07385
(11A)
AP200:
SPAP_RS08205
(12F)
ASP0581:
EL334_RS08445
(19F)
ATCC 49619:
EL263_RS11840
(23F)
ATCC 700669:
SPN23F_RS08340
(19F)
BM6001:
ODS73_RS08695
(1)
BVJ1JL:
JN057_RS07985
(14)
CGSP14:
SPCG_RS08420
(19F)
G54:
SPG_RS07795
(1)
gamPNI0373:
HMPREF1038_RS08015
(3)
HU-OH:
EL271_RS08100
(19A)
Hu15:
SPNHU15_RS00555
(19A)
Hu17:
SPNHU17_RS07855
(1)
INV104:
INV104_RS08095
(14)
INV200:
SPNINV200_RS07875
(14)
JJA:
SPJ_RS07680
(19F)
MDRSPN001:
MDRSPN_RS02870
(1)
NCTC7465:
AT689_RS05885
(2)
NCTC7466:
DQM66_RS07795
(4)
NU83127:
EL277_RS08230
(3)
OXC141:
SPNOXC_RS07865
(1)
P1031:
SPP_RS08230
(2)
R6:
SPR_RS07440
(19A)
SP49:
BMJ42_RS08765
(1)
SPN032672:
SPN032672_RS02985
(3)
SPN034156:
SPN034156_RS02930
(3)
SPN034183:
SPN034183_RS07890
(3)
SPN994038:
SPN994038_RS07790
(3)
SPN994039:
SPN994039_RS07795
(3)
SPNA45:
SPNA45_RS03380
(19F)
ST556:
MYY_RS08125
(19F)
Taiwan19F-14:
SPT_RS07915
(19A)
TCH8431/19A:
HMPREF0837_RS09065
(4)
Xen35:
CXP32_RS08245

⊟Genome Viewer

TIGR4
D39
D39V
Hungary19A-6
EF3030

⊟Alignments

• alignment of orthologues:
  CLUSTAL format alignment by MAFFT L-INS-i (v7.505)
  
  
  TIGR4           MIRNKKQDYVLAYKQPASTTYMGWEEEALPIGNGSLGAKVFGLIGAERIQFNEKSLWSGG
  D39             MIRNKKQDYVLAYKQPASTTYMSWEEEALPIGNGSLGAKVFGLIGAERIQFNEKSLWSGG
  D39V            MIRNKKQDYVLAYKQPASTTYMSWEEEALPIGNGSLGAKVFGLIGAERIQFNEKSLWSGG
                  **********************.*************************************
  
  TIGR4           PLPDSSDYQGGNLQDQYVFLAEIRQALEKRDYNLAKELAEQHLIGPKTSQYGTYLSFGDI
  D39             PLPDSSDYQGGNLQDQYVFLAEIRQALEKRDYNLAKELAEQHLIGPKTSQYGTYLSFGDI
  D39V            PLPDSSDYQGGNLQDQYVFLAEIRQALEKRDYNLAKELAEQHLIGPKTSQYGTYLSFGDI
                  ************************************************************
  
  TIGR4           HIEFSQQGTTLSQVTDYQRQLNISKALATTSYVYKGTRFERKAFASFPDDLLVQCFTKEG
  D39             HIEFNQQGTTLSQVTDYQRQLNISKALATTSYVYKGTRFEREAFASFPDDLLVQCFTKEG
  D39V            HIEFNQQGTTLSQVTDYQRQLNISKALATTSYVYKGTRFEREAFASFPDDLLVQCFTKEG
                  ****.************************************:******************
  
  TIGR4           LETLDFTIELSLTCDLASDGKYEQEKSDYKECKLDITDSHILMKGRVKDNDLRFASYLAW
  D39             LETLDFTIELSLTCDLASDGKYEQEKSDYKECKLDITDSHILMKGRVKDNDLRFASYLAW
  D39V            LETLDFTIELSLTCDLASDGKYEQEKSDYKECKLDITDSHILMKGRVKDNDLRFASYLAW
                  ************************************************************
  
  TIGR4           ETDGDIRVWSDRVQISGASYANLFLAAKTDFAQNPASNYRKKLDLEQQVIDLVDTAKEKG
  D39             ETDGDIRVWSDRVQISGASYANLFLAAKTDFAQNPASNYRKKLDLEQQVIDLVDTAKEKG
  D39V            ETDGDIRVWSDRVQISGASYANLFLAAKTDFAQNPASNYRKKLDLEQQVIDLVDTAKEKG
                  ************************************************************
  
  TIGR4           YTQLKSRHIEDYQALFQRVQLDLEADVDASTTDDLLKNYKPQEGQALEELFFQYGRYLLI
  D39             YTQLKSRHIEDYQALFQRVQLDLEADVDASTTDDLLKNYKPQEGQALEELFFQYGRYLLI
  D39V            YTQLKSRHIEDYQALFQRVQLDLEADVDASTTDDLLKNYKPQEGQALEELFFQYGRYLLI
                  ************************************************************
  
  TIGR4           SSSRDCPDALPANLQGVWNAVDNPPWNSDYHLNVNLQLNYWPAYVTNLLETVFPVINYVD
  D39             SSSRDCPDALPANLQGVWNAVDNPPWNSDYHLNVNLQMNYWPAYVTNLLETVFPVINYVD
  D39V            SSSRDCPDALPANLQGVWNAVDNPPWNSDYHLNVNLQMNYWPAYVTNLLETVFPVINYVD
                  *************************************:**********************
  
  TIGR4           DLRVYGRLAAVKYAGIVSQKGEENGWLVHTQATPFGWTAPGWDYYWGWSPAANAWMMQTV
  D39             DLRVYGRLAAVKYAGIVSQKGEENGWLVHTQATPFGWTAPGWDYYWGWSPAANAWMMQTV
  D39V            DLRVYGRLAAVKYAGIVSQKGEENGWLVHTQATPFGWTAPGWDYYWGWSPAANAWMMQTV
                  ************************************************************
  
  TIGR4           YEAYLFYRDQDYLREKIYPMLRETVRFWNAFLHKDQQAQRWVSSPSYSPEHGPISIGNTY
  D39             YEAYSFYRDQDYLREKIYPMLRETVRFWNTFLHKDQQAQRWVSSPSYSPEHGPISIGNTY
  D39V            YEAYSFYRDQDYLREKIYPMLRETVRFWNTFLHKDQQAQRWVSSPSYSPEHGPISIGNTY
                  **** ************************:******************************
  
  TIGR4           DQSLIWQLFHDFIQAAQELGLDEDLLTEVKEKSDLLNPLQITQSGRIREWYEEEEQYFQN
  D39             DQSLIWQLFHDFIQAAQELGLDEDLLTEVKEKSDLLNSLQITQSGRIREWYEEEEQYFQN
  D39V            DQSLIWQLFHDFIQAAQELGLDEDLLTEVKEKSDLLNSLQITQSGRIREWYEEEEQYFQN
                  *************************************.**********************
  
  TIGR4           EKVEAQHRHASHLVGLYPGNLFSYKGQEYIEAARASLNDRGDGGTGWSKANKINLWARLG
  D39             EKVEAQHRHASHLVGLYPGNLFSYKGQEYIEAARASLNDRGDGGTGWSKANKINLWARLG
  D39V            EKVEAQHRHASHLVGLYPGNLFSYKGQEYIEAARASLNDRGDGGTGWSKANKINLWARLG
                  ************************************************************
  
  TIGR4           DGNRAHKLLAEQLKTSTLQNLWCSHPPFQIDGNFGATSGMAEMLLQSHAAYLVPLAALPD
  D39             DGNRAHKLLAEQLKTSTLPNLWCSHPPFQIDGNFGATSGMAEMLLQSHAAYLVPLAALPD
  D39V            DGNRAHKLLAEQLKTSTLPNLWCSHPPFQIDGNFGATSGMAEMLLQSHAAYLVPLAALPD
                  ****************** *****************************************
  
  TIGR4           AWSTGSVSGLMARGHFEVSMSWEDKKLLQLTILSRSGGDLRVSYPDIEKSVIKMNQEKIK
  D39             AWSTGSVSGLMARGHFEVSMSWEDKKLLQLTILSRSGGDLRVSYPDIEKSVIKMNQEKIK
  D39V            AWSTGSVSGLMARGHFEVSMSWEDKKLLQLTILSRSGGDLRVSYPDIEKSVIKMNQEKIK
                  ************************************************************
  
  TIGR4           AKCMGKDCISVATAEGDLVQFYF
  D39             AKCMGKDCISVATAEGDLVQFYF
  D39V            AKCMGKDCISVATAEGDLVQFYF
                  ***********************