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PangenomeTIGR4
serotype 4
D39serotype 2
D39Vserotype 2
Hungary19A-6serotype 19A
EF3030serotype 19F
670-6Bserotype 6B
6A-10serotype 6A
70585serotype 5
A026serotype 19F
A66serotype 3
AP200serotype 11A
ASP0581serotype 12F
ATCC 49619serotype 19F
ATCC 700669serotype 23F
BVJ1JLserotype 1
CGSP14serotype 14
G54serotype 19F
HU-OHserotype 3
Hu15serotype 19A
Hu17serotype 19A
INV104serotype 1
INV200serotype 14
JJAserotype 14
MDRSPN001serotype 19F
NCTC7466serotype 2
NU83127serotype 4
OXC141serotype 3
P1031serotype 1
R6serotype 2
SP49serotype 19A
SPN032672serotype 1
SPN034156serotype 3
SPN034183serotype 3
SPN994038serotype 3
SPN994039serotype 3
SPNA45serotype 3
ST556serotype 19F
TCH8431/19Aserotype 19A
Taiwan19F-14serotype 19F
Xen35serotype 4
gamPNI0373serotype 1
⊟Summary[edit | edit source]
- pan ID?: PNEUPAN003080000
- symbol?: satA
- synonym:
- description?: ABC transporter substrate-binding protein
- ABC transporter substrate-binding protein
- ABC transporter substrate-binding protein - sugar transport
- extracellular solute-binding lipoprotein
- sugar ABC transporter, sugar-binding protein
- sugar ABC transporter substrate-binding protein
- Putative ABC transporter substrate-binding protein
- ABC transporter, sugar transporter, sugar binding lipoprotein-N-acetylneuraminate-binding protein
- carbohydrate ABC transporter substrate-binding protein
- ABC transporter, putative N-acetylneuraminate-binding protein
- ABC transporter, solute-binding protein
- ABC transporter, substrate binding protein
- ABC-type sugar transport system, periplasmic component
- bacterial extracellular solute-binding family protein
descriptions from strain specific annotations:
- strand?: -
- coordinates?: 3899747..3901075
- occurrence?: in 98% of 41 strains
⊟Orthologs[edit | edit source]
⊟Genome Viewer[edit | edit source]
| TIGR4 | |
| D39 | |
| D39V | |
| Hungary19A-6 | |
| EF3030 |
⊟Alignments[edit | edit source]
- alignment of orthologues: CLUSTAL format alignment by MAFFT L-INS-i (v7.505)
TIGR4 MKFRKLACTVLAGAAVLGLAACGNSGGSKDAAKSGGDGAKTEITWWAFPVFTQEKTGDGV
D39 MKFRKLACTVLAGAAVLGLAACGNSGGSKDAAKSGGDGAKTEITWWAFPVFTQEKTGDGV
D39V MKFRKLACTVLAGAAVLGLAACGNSGGSKDAAKSGGDGAKTEITWWAFPVFTQEKTGDGV
Hungary19A-6 MKFRKLACTVLASAAVLGLAACGNSGGSKDAAKSGGDGAKTEITWWAFPVFTQEKTGDGV
EF3030 MKFRKLACTVLAGAAVLGLAACGNSGGSKDAAKSGGDGAKTEITWWAFPVFTQEKTGDGV
************.***********************************************
TIGR4 GTYEKSIIEAFEKANPDIKVKLETIDFKSGPEKITTAIEAGTAPDVLFDAPGRIIQYGKN
D39 GTYEKSIIEAFEKANPDIKVKLETIDFKSGPEKITTAIEAGTAPDVLFDAPGRIIQYGKN
D39V GTYEKSIIEAFEKANPDIKVKLETIDFKSGPEKITTAIEAGTAPDVLFDAPGRIIQYGKN
Hungary19A-6 GTYEKSIIEAFEKANPDVKVKLETIDFKSGPEKITTAIEAGTAPDVLFDAPGRIIQYGKN
EF3030 GTYEKSIIEAFEKANPDIKVKLETIDFKSGPEKITTAIEAGTAPDVLFDAPGRIIQYGKN
*****************:******************************************
TIGR4 GKLAELNDLFTDEFVKDVNNENIVQASKAGDKAYMYPISSAPFYMAMNKKMLEDAGVANL
D39 GKLAELNDLFTDEFVKDVNNENIVQASKAGDKAYMYPISSAPFYMAMNKKMLEDAGVANL
D39V GKLAELNDLFTDEFVKDVNNENIVQASKAGDKAYMYPISSAPFYMAMNKKMLEDAGVANL
Hungary19A-6 GKLADLNDLFTDEFVKDVNNENIVQASKAGDKAYMYPISSAPFYMAMNKKMLEDAGVANL
EF3030 GKLAELNDLFTDEFVKDVNNENIVQASKAGDKAYMYPISSAPFYMAMNKKMLEDAGVANL
****:*******************************************************
TIGR4 VKEGWTTDDFEKVLKALKDKGYTPGSLFSSGQGGDQGTRAFISNLYSGSVTDEKVSKYTT
D39 VKEGWTTDDFEKVLKALKDKGYTPGSLFSSGQGGDQGTRAFISNLYSGSVTDEKVSKYTT
D39V VKEGWTTDDFEKVLKALKDKGYTPGSLFSSGQGGDQGTRAFISNLYSGSVTDEKVSKYTT
Hungary19A-6 VKEGWTTDDFEKVLKALKDKGYTPGSLFSSGQGGDQGTRAFISNLYSGSVTDEKVSKYTT
EF3030 VKEGWTTDDFEKVLKALKDKGYTPGSLFSSGQGGDQGTRAFISNLYSGSVTDEKVSKYTT
************************************************************
TIGR4 DDPKFVKGLEKATSWIKDNLINNGSQFDGGADIQNFANGQTSYTILWAPAQNGIQAKLLE
D39 DDPKFVKGLEKATSWIKDNLINNGSQFDGGADIQNFANGQTSYTILWAPAQNGIQPKLLE
D39V DDPKFVKGLEKATSWIKDNLINNGSQFDGGADIQNFANGQTSYTILWAPAQNGIQPKLLE
Hungary19A-6 DDPKFVKGLEKATSWIKDNLLNNGSQFDGGADIQNFANGQTSYTILWAPAQNGIQAKLLE
EF3030 DDPKFVKGLEKATSWIKDNLINNGSQFDGGADIQNFANGQTSYTILWAPAQNGIQAKLLE
********************:**********************************.****
TIGR4 ASKVEVVEVPFPSDEGKPALEYLVNGFAVFNNKDDKKVAASKKFIQFIADDKEWGPKDVV
D39 ASKVEVVEVPFPSDEGKPALEYLVNGFAVFNNKDDKKVAASKKFIQFIADDKEWGPKDVV
D39V ASKVEVVEVPFPSDEGKPALEYLVNGFAVFNNKDDKKVAASKKFIQFIADDKEWGPKDVV
Hungary19A-6 ASKVEVVEVPFPSDEGKPALEYLVNGFAVFNNKDDKKVAASKKFIQFIADDKEWGPKDVV
EF3030 ASKVEVVEVPFPSDEGKPALEYLVNGFAVFNNKDDKKVAASKKFIQFIADDKEWGPKDVV
************************************************************
TIGR4 RTGAFPVRTSFGKLYEDKRMETISGWTQYYSPYYNTIDGFAEMRTLWFPMLQSVSNGDEK
D39 RTGAFPVRTSFGKLYEDKRMETISGWTQYYSPYYNTIDGFAEMRTLWFPMLQSVSNGDEK
D39V RTGAFPVRTSFGKLYEDKRMETISGWTQYYSPYYNTIDGFAEMRTLWFPMLQSVSNGDEK
Hungary19A-6 RTGAFPVRTSFGKLYDDKRMETISSWTQYYSPYYNTIDGFAEMRTLWFPMLQSVSNGDEK
EF3030 RTGAFPVRTSFGKLYEDKRMETISGWTQYYSPYYNTIDGFAEMRTLWFPMLQSVSNGDEK
***************:********.***********************************
TIGR4 PADALKAFTEKANETIKKAMKQ
D39 PADALKAFTEKANETIKKAMKQ
D39V PADALKAFTEKANETIKKAMKQ
Hungary19A-6 PADALKAFTEKANETIKKAMKQ
EF3030 PADALKAFTEKANETIKKAMKQ
**********************