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PangenomeTIGR4
serotype 4
D39serotype 2
D39Vserotype 2
Hungary19A-6serotype 19A
EF3030serotype 19F
670-6Bserotype 6B
6A-10serotype 6A
70585serotype 5
A026serotype 19F
A66serotype 3
AP200serotype 11A
ASP0581serotype 12F
ATCC 49619serotype 19F
ATCC 700669serotype 23F
BM6001serotype 19F
BVJ1JLserotype 1
CGSP14serotype 14
G54serotype 19F
HU-OHserotype 3
Hu15serotype 19A
Hu17serotype 19A
INV104serotype 1
INV200serotype 14
JJAserotype 14
MDRSPN001serotype 19F
NCTC7465serotype 1
NCTC7466serotype 2
NU83127serotype 4
OXC141serotype 3
P1031serotype 1
R6serotype 2
SP49serotype 19A
SPN032672serotype 1
SPN034156serotype 3
SPN034183serotype 3
SPN994038serotype 3
SPN994039serotype 3
SPNA45serotype 3
ST556serotype 19F
TCH8431/19Aserotype 19A
Taiwan19F-14serotype 19F
Xen35serotype 4
gamPNI0373serotype 1
⊟Summary[edit | edit source]
- pan ID?: PNEUPAN003104000
- symbol?: ABC-MSP_14
- synonym:
- description?: carbohydrate ABC transporter permease
- carbohydrate ABC transporter permease
- ABC transporter, permease protein
- putative permease component of ABC transporter
- ABC transporter membrane-spanning permease - sugar transport
- ABC transporter permease
- Inner membrane ABC transporter permease protein
- ABC transporter permease SP1688
- sugar ABC transporter permease
- ABC-type sugar transport system, permease component
- binding-protein-dependent transport system inner membrane component family protein
- Diacetylchitobiose uptake system permease protein NgcG
- putative permease component of ABC transporter (pseudogene)
- Ribose ABC transport system, permease protein RbsC (TC 3.A.1.2.1)
- pseudogene
descriptions from strain specific annotations:
- strand?: -
- coordinates?: 4015028..4022126
- occurrence?: in 100% of 43 strains
⊟Orthologs[edit | edit source]
⊟Genome Viewer[edit | edit source]
| TIGR4 | |
| D39 | |
| D39V | |
| Hungary19A-6 | |
| EF3030 |
⊟Alignments[edit | edit source]
- alignment of orthologues: CLUSTAL format alignment by MAFFT L-INS-i (v7.505)
TIGR4 MKKKSSIYLDILSHVLLVGATIVAVFPLVWIIISSVKGKGELTQYPTRFWPEQFTLDYFT
D39 MKKKSGIYLDILSHVLLVGATIVAVFPLVWIIISSVKGKGELTQYPTRFWPEQFTLDYFT
D39V MKKKSGIYLDILSHVLLVGATIVAVFPLVWIIISSVKGKGELTQYPTRFWPEQFTLDYFT
Hungary19A-6 MKKKSGIYLDILSHVLLIGATIVAIFPLVWIIISSVKGKGELTQYPTRFWPEQFTLDYFT
EF3030 MKKKSGIYLDILSHVLLVGATIVAVFPLVWIIISSVKGKGELTQYPTRFWPEQFTLDYFT
*****.***********:******:***********************************
TIGR4 HVINDLHFIDNIRNSLIIALATTLIAIIISAMAAYGIVRFFPKLGAIMSRLLVITYIFPP
D39 HVINDLHFIDNIRNSLIIALATTLIAIIISAMAAYGIVRFFPKLGAIMSRLLVITYIFPP
D39V HVINDLHFIDNIRNSLIIALATTLIAIIISAMAAYGIVRFFPKLGAIMSRLLVITYIFPP
Hungary19A-6 HVINDLHFIDNIRNSLIIALATTLIAIIISAMAAYGIVRFFPKLGAIMSRLLVITYIFPP
EF3030 HVINDLHFIDNIRNSLIIALATTLIAIIISAMAAYGIVRFFPKLGAIMSRLLVITYIFPP
************************************************************
TIGR4 ILLAIPYSIAIAKVGLTNSLFGLMMVYLSFSVPYAVWLLVGFFQTVPIGIEEAARIDGAN
D39 ILLAIPYSIAIAKVGLTNSLFGLMMVYLSFSVPYAVWLLVGFFQTVPIGIEEAARIDGAN
D39V ILLAIPYSIAIAKVGLTNSLFGLMMVYLSFSVPYAVWLLVGFFQTVPIGIEEAARIDGAN
Hungary19A-6 ILLAIPYSIAIAKVGLTNSLFGLMMVYLSFSVPYAVWLLVGFFQTVPIGIEEAARIDGAN
EF3030 ILLAIPYSIAIAKVGLTNSLFGLMMVYLSFSVPYAVWLLVGFFQTVPIGIEEAARIDGAN
************************************************************
TIGR4 KFVTFYKVVLPIVAPGIVATAIYTFINAWNEFLYALILINNTGKMTVAVALRSLNGSEIL
D39 KFVTFYKVVLPIVAPGIVATAIYTFINAWNEFLYALILINNTGKMTVAVALRSLNGSEIL
D39V KFVTFYKVVLPIVAPGIVATAIYTFINAWNEFLYALILINNTGKMTVAVALRSLNGSEIL
Hungary19A-6 KFVTFYKVVLPIVAPGIVATAIYTFINAWNEFLYALILINNTGKMTVAVALRSLNGSEIL
EF3030 KFVTFYKVVLPIVAPGIVATAIYTFINAWNEFLYALILINNTGKMTVAVALRSLNGSEIL
************************************************************
TIGR4 DWGDMMAASVIVVLPSIIFFSIIQNKIASGLSEGSVK
D39 DWGDMMAASVIVVLPSIIFFSIIQNKIASGLSEGSVK
D39V DWGDMMAASVIVVLPSIIFFSIIQNKIASGLSEGSVK
Hungary19A-6 DWGDMMAASVIVVLPSIIFFSIIQNKIASGLSEGSVK
EF3030 DWGDMMAASVIVVLPSIIFFSIIQNKIASGLSEGSVK
*************************************