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PangenomeTIGR4
serotype 4
D39serotype 2
D39Vserotype 2
Hungary19A-6serotype 19A
EF3030serotype 19F
670-6Bserotype 6B
6A-10serotype 6A
70585serotype 5
A026serotype 19F
A66serotype 3
AP200serotype 11A
ASP0581serotype 12F
ATCC 49619serotype 19F
ATCC 700669serotype 23F
BVJ1JLserotype 1
CGSP14serotype 14
G54serotype 19F
HU-OHserotype 3
Hu15serotype 19A
Hu17serotype 19A
INV104serotype 1
INV200serotype 14
JJAserotype 14
MDRSPN001serotype 19F
NCTC7466serotype 2
NU83127serotype 4
OXC141serotype 3
P1031serotype 1
R6serotype 2
SP49serotype 19A
SPN032672serotype 1
SPN034156serotype 3
SPN034183serotype 3
SPN994038serotype 3
SPN994039serotype 3
SPNA45serotype 3
ST556serotype 19F
TCH8431/19Aserotype 19A
Taiwan19F-14serotype 19F
Xen35serotype 4
gamPNI0373serotype 1
⊟Summary[edit | edit source]
- pan ID?: PNEUPAN003129000
- symbol?: scrA
- synonym:
- description?: sucrose-specific PTS transporter subunit IIBC
- sucrose-specific PTS transporter subunit IIBC
- putative sucrose-specific phosphotransferase system (PTS), IIABC component
- PTS beta-glucoside transporter subunit IIBCA
- pts system, sucrose-specific iibc component
- PTS system IIABC components
- PTS system trehalose-specific EIIBC component
- PTS beta-glucoside transporter subunit EIIBCA
- PTS sucrose transporter subunit IIABC
- Phosphotransferase system enzyme II
- Phosphotransferase system IIC component, glucose/maltose/N-acetylglucosamine-specific
- PTS family sucrose (suc) porter component IIABC
- PTS system, IIabc component
- PTS system, IIBCA components
- PTS system, sucrose-specific IIB component (EC 2.7.1.69) / PTS system, sucrose-specific IIC component (EC 2.7.1.69) / PTS system, sucrose-specific IIA component (EC 2.7.1.69)
- PTS system, sucrose-specific IIB component / PTS system, sucrose-specific IIC component / PTS system,sucrose-specific IIA component
- PTS system IIABC component
- PTS system sucrose-specific IIBC component
- Sucrose-specific PTS IIBCA components
descriptions from strain specific annotations:
- strand?: -
- coordinates?: 3955778..3958228
- occurrence?: in 100% of 41 strains
⊟Orthologs[edit | edit source]
⊟Genome Viewer[edit | edit source]
| TIGR4 | |
| D39 | |
| D39V | |
| Hungary19A-6 | |
| EF3030 |
⊟Alignments[edit | edit source]
- alignment of orthologues: CLUSTAL format alignment by MAFFT L-INS-i (v7.505)
TIGR4 MNNQEIAKKVIDALGGRENVNSVAHCATRLRVMVKDEEKINKEVIENLEKVQGAFFNSGQ
D39 MNNQEIAKKVIDALGGRENVNSVAHCATRLRVMVKDEEKINKEVIENLEKVQGAFFNSGQ
D39V MNNQEIAKKVIDALGGRENVNSVAHCATRLRVMVKDEEKINKEVIENLEKVQGAFFNSGQ
Hungary19A-6 MNNQEIAKKVIDALGGRENVNSVAHCATRLRVMVKDEEKINKEVIENLEKVQGAFFNSGQ
EF3030 MDYSKVAAEVIEAV-GKDNLVAAAHCATRLRLVLKDEAKVNQAALDNNADVKGTFSTNGQ
*: .::* :**:*: *::*: :.********:::*** *:*: .::* .*:*:* ..**
TIGR4 YQIIFGTGTVNKMYDEVV-VLGLPTSSKDDMK--AEVAKQGNWFQRAIRTFGDVFVPIIP
D39 YQIIFGTGTVNKMYDEVV-VLGLPTSSKDDMK--AEVAKQGNWFQRAIRTFGDVFVPIIP
D39V YQIIFGTGTVNKMYDEVV-VLGLPTSSKDDMK--AEVAKQGNWFQRAIRTFGDVFVPIIP
Hungary19A-6 YQIIFGTGTVNKMYDEVV-VLGLPTSSKDDMK--AEVAKQGNWFQRAIRTFGDVFVPIIP
EF3030 YQIIIGPGDVNFVYAEIIKKTGLKEVSTDDLKEIANKDKKFNPLMDLIKLLSDIFVPIIP
****:*.* ** :* *:: ** *.**:* *: *: * : *: :.*:******
TIGR4 VIVATGLFMGVRGLFNALEM----------PLPGDFATYTQILTDTAFIILPGLVVWSTF
D39 VIVATGLFMGVRGLFNALEM----------PLPGDFATYTQILTDTAFIILPGLVVWSTF
D39V VIVATGLFMGVRGLFNALEM----------PLPGDFATYTQILTDTAFIILPGLVVWSTF
Hungary19A-6 VIVATGLFMGVRGLFNALEM----------PLPGDFATYTQILTDTAFIILPGLVVWSTF
EF3030 ALVAGGLLMALRNFLTSPDLFGPQSIEDMYPAIKGFSAMIQLMSAAPFMFLPVLVGISAA
.:** **:*.:*.::.: :: * .*:: *::: :.*::** ** *:
TIGR4 RVFGGNPAVGIVLGMMLVSGSLPNAWAVAQGGEVTAMNFFGF-IPVVGLQGSVLPAFIIG
D39 RVFGGNPAVGIVLGMMLVSGSLPNAWAVAQGGEVTAMNFFGF-IPVVGLQGSVLPAFIIG
D39V RVFGGNPAVGIVLGMMLVSGSLPNAWAVAQGGEVTAMNFFGF-IPVVGLQGSVLPAFIIG
Hungary19A-6 RVFGGNPAVGIVLGMMLVSGSLPNAWAVAQGGEVTAMNFFGF-IPVVGLQGSVLPAFIIG
EF3030 KRFGANQFLGAAIGMIMTTPDL--------GGKEAFWDILGFHVTQTNYAYQVIPVLVAV
: **.* :* .:**::.: .* **: : :::** :. .. .*:*.::
TIGR4 VVGAKFEKAVRKVVPDVIDLLVTPFVTLLVMSILGLFVIGPVFHVVENYILIATKAILSM
D39 VVGAKFEKAVRKVVPDVIDLLVTPFVTLLVMSILGLFVIGPVFHVVENYILIATKAILSM
D39V VVGAKFEKAVRKVVPDVIDLLVTPFVTLLVMSILGLFVIGPVFHVVENYILIATKAILSM
Hungary19A-6 VVGAKFEKAVRKVVPDVIDLLVTPFVTLLVMSILGLFVIGPVFHVVENYILIATKAILSM
EF3030 WLLANLEKFFHKKLPSAVDFTFTPLLSVMITGFLTFTVIGPVMLVVSDAITNAIVWLYNT
: *::** .:* :*..:*: .**:::::: .:* : *****: **.: * * : .
TIGR4 PFGLGGFLIGGVHQLIVVSGVHHIFNLLEVQLLAADHANPFN------AIITAAMTAQGA
D39 PFGLGGFLIGGVHQLIVVSGVHHIFNLLEVQLLAADHANPFN------AIITAAMTAQGA
D39V PFGLGGFLIGGVHQLIVVSGVHHIFNLLEVQLLAADHANPFN------AIITAAMTAQGA
Hungary19A-6 PFGLGGFLIGGVHQLIVVSGVHHIFNLLEVQLLAADHANPFN------AIITAAMTAQGA
EF3030 TGAFGMGLFGGTYSLIVMTGLHQSFPAIETQLLSAYNNNGTGFGDYIFVVASMANVAQGA
. .:* *:**.:.***::*:*: * :*.***:* : * . .: : * .****
TIGR4 ATVAVGVKTKNPKLKTLAFPAALSAFLGITEPAIFGVNLRFRKPFFLSLIAGAIGGGLAS
D39 ATVAVGVKTKNPKLKTLAFPAALSAFLGITEPAIFGVNLRFRKPFFLSLIAGAIGGGLAS
D39V ATVAVGVKTKNPKLKTLAFPAALSAFLGITEPAIFGVNLRFRKPFFLSLIAGAIGGGLAS
Hungary19A-6 ATVAVGVKTKNPKLKTLAFPAALSAFLGITEPAIFGVNLRFRKPFFLSLIAGAIGGGLAS
EF3030 ATLAVYFLTKNAKTKGLSSSAAVSAFLGITEPALFGVNLKYKFPFFCALAGSAIGAFVAG
**:** . ***.* * *: .**:**********:*****::: *** :* ..***. :*.
TIGR4 ILGLAGTGNGITIIPGTMLYVGNGQLPQYLLMVAVSFALGFALTYMFGYEDEVDA---TA
D39 ILGLAGTGNGITIIPGTMLYVGNGQLPQYLLMVAVSFALGFALTYMFGYEDEVDA---TA
D39V ILGLAGTGNGITIIPGTMLYVGNGQLPQYLLMVAVSFALGFALTYMFGYEDEVDA---TA
Hungary19A-6 ILGLAGTGNGITIIPGTMLYVGNGQLPQYLLMVAVSFALGFALTYMFGYEDEVDA---TA
EF3030 LTHVIAVSLGAAGFIG-FLSIKAGSIPMYIIAEIMSFVAAFAFTYFYGKTKAASVFADEA
: : ... * : : * :* : *.:* *:: :**. .**:**::* . ... *
TIGR4 AAKRAEVAEEKEEVAPA-----ALQNETLVTPIVGDVVALADVNDPVFSSGAMGQGIVVK
D39 AAKQAEVAEEKEEVAPA-----ALQNETLVTPIVGDVVALADVNDPVFSSGAMGQGIAVK
D39V AAKQAEVAEEKEEVAPA-----ALQNETLVTPIVGDVVALADVNDPVFSSGAMGQGIAVK
Hungary19A-6 AAKQAEVAEEKEEVAPA-----ALQNETLVTPIVGDVVALADVNDPVFSSGAMGQGIAVK
EF3030 ATATAETVTEPTVEAPVVEETDTLQNETLVTPIVGDVVALADVNDPVFSSGAMGQGIAVK
*: **.. * **. :**********************************.**
TIGR4 PSQGVVYAPADAEVSIAFPTGHAFGLKTRNGAEVLIHVGIDTVSMNGDGFETKVAQGNKV
D39 PSQGVVYALADAEVSIAFPTGHAFGLKTRNGAEVLIHVGIDTVSMNGDGFEAKVAQGNKV
D39V PSQGVVYALADAEVSIAFPTGHAFGLKTRNGAEVLIHVGIDTVSMNGDGFEAKVAQGNKV
Hungary19A-6 PSQGVVYAPADAEVSIAFPTGHAFGLKTRNGAEVLIHVGIDTVSMNGDGFEAKVAQGNKV
EF3030 PSQGVVYAPADAEVSIAFPTGHAFGLKTRNGAEVLIHVGIDTVSMNGDGFEAKVAQGNKV
******** ******************************************:********
TIGR4 KAGDVLGTFDSNKIAAAGLDDTTMVIVTNTGDYASVAPVATGSVAKGDAVIEVKI
D39 KAGDVLGTFDSNKIAAAGLDDTTMVIVTNTADYASVAPVATGSVSKGDAVIEVKI
D39V KAGDVLGTFDSNKIAAAGLDDTTMVIVTNTADYASVAPVATGSVSKGDAVIEVKI
Hungary19A-6 KAGDVLGTFDSNKIAAAGFDDTTMVIVTNTADYASVAPVATGSVAKGNAVIEVKI
EF3030 KAGDVLGTFDSNKIAAAGLDDTTMVIVTNTADYASVAPVATGSVAKGDAVIEVKI
******************:***********.*************:**:*******