PangenomeTIGR4

serotype 4

D39

serotype 2

D39V

serotype 2

Hungary19A-6

serotype 19A

EF3030

serotype 19F

670-6B

serotype 6B

6A-10

serotype 6A

70585

serotype 5

A026

serotype 19F

A66

serotype 3

AP200

serotype 11A

ASP0581

serotype 12F

ATCC 49619

serotype 19F

ATCC 700669

serotype 23F

BM6001

serotype 19F

BVJ1JL

serotype 1

CGSP14

serotype 14

G54

serotype 19F

HU-OH

serotype 3

Hu15

serotype 19A

Hu17

serotype 19A

INV104

serotype 1

INV200

serotype 14

JJA

serotype 14

MDRSPN001

serotype 19F

NCTC7465

serotype 1

NCTC7466

serotype 2

NU83127

serotype 4

OXC141

serotype 3

P1031

serotype 1

R6

serotype 2

SP49

serotype 19A

SPN032672

serotype 1

SPN034156

serotype 3

SPN034183

serotype 3

SPN994038

serotype 3

SPN994039

serotype 3

SPNA45

serotype 3

ST556

serotype 19F

TCH8431/19A

serotype 19A

Taiwan19F-14

serotype 19F

Xen35

serotype 4

gamPNI0373

serotype 1

⊟Summary

• pan ID^?: PNEUPAN003162000
• symbol^?: rny
• synonym:
• description^?: ribonuclease Y

  descriptions from strain specific annotations:

  • ribonuclease Y
  • Conserved hypothetical protein
  • putative phosphohydrolase
  • putative HD superfamily hydrolase
  • KH domain protein
  • ribonuclease
  • Hydrolase (HAD superfamily)
  • Predicted HD superfamily hydrolase
  • putative phosphohydrolase (pseudogene)
  • YmdA/YtgF family protein
  • pseudogene
• strand^?: -
• coordinates^?: 4087564..4089177
• occurrence^?: in 100% of 43 strains

⊟Orthologs

(4)^?
TIGR4:
SP_RS08605
(2)
D39:
SPD_RS08240
(2)
D39V:
SPV_RS08235
(19A)
Hungary19A-6:
SPH_RS09010
(19F)
EF3030:
EF3030_RS08215
(6B)^?
670-6B:
SP670_RS09105
(6A)
6A-10:
HKM25_RS08685
(5)
70585:
SP70585_RS08835
(19F)
A026:
T308_RS08120
(3)
A66:
A66_RS07785
(11A)
AP200:
SPAP_RS08650
(12F)
ASP0581:
EL334_RS08880
(19F)
ATCC 49619:
EL263_RS08440
(23F)
ATCC 700669:
SPN23F_RS08785
(19F)
BM6001:
ODS73_RS09100
(1)
BVJ1JL:
JN057_RS08400
(14)
CGSP14:
SPCG_RS08860
(19F)
G54:
SPG_RS08215
(1)
gamPNI0373:
HMPREF1038_RS08440
(3)
HU-OH:
EL271_RS08525
(19A)
Hu15:
SPNHU15_RS00960
(19A)
Hu17:
SPNHU17_RS08260
(1)
INV104:
INV104_RS08520
(14)
INV200:
SPNINV200_RS08315
(14)
JJA:
SPJ_RS08125
(19F)
MDRSPN001:
MDRSPN_RS02440
(1)
NCTC7465:
AT689_RS05460
(2)
NCTC7466:
DQM66_RS08235
(4)
NU83127:
EL277_RS08675
(3)
OXC141:
SPNOXC_RS08285
(1)
P1031:
SPP_RS08665
(2)
R6:
SPR_RS07855
(19A)
SP49:
BMJ42_RS09215
(1)
SPN032672:
SPN032672_RS03410
(3)
SPN034156:
SPN034156_RS03350
(3)
SPN034183:
SPN034183_RS08310
(3)
SPN994038:
SPN994038_RS08210
(3)
SPN994039:
SPN994039_RS08215
(3)
SPNA45:
SPNA45_RS02950
(19F)
ST556:
MYY_RS08555
(19F)
Taiwan19F-14:
SPT_RS08345
(19A)
TCH8431/19A:
HMPREF0837_RS09495
(4)
Xen35:
CXP32_RS08685

⊟Genome Viewer

TIGR4
D39
D39V
Hungary19A-6
EF3030

⊟Alignments

• alignment of orthologues:
  CLUSTAL format alignment by MAFFT L-INS-i (v7.505)
  
  
  TIGR4           MEIMSLAIAVFAVIIGLVIGYVSISAKMKSSQEAAELMLLNAEQEATNLRGQAEREADLL
  D39             MEIMSLAIAVFAVIIGLVIGYVSISAKMKSSQEAAELMLLNAEQEATNLRGQAEREADLL
  D39V            MEIMSLAIAVFAVIIGLVIGYVSISAKMKSSQEAAELMLLNAEQEATNLRGQAEREADLL
  Hungary19A-6    MEIMSLAIAVFAVIIGLVIGYVSISAKMKSSQEAAELMLLNAEQEATNLRGQAEREADLL
  EF3030          MEIMSLAIAVFAVIIGLVIGYVSISAKMKSSQEAAELMLLNAEQEATNLRGQAEREADLL
                  ************************************************************
  
  TIGR4           VNEAKRESKSLKKEALLEAKEEARKYREEVDAEFKSERQELKQIESRLTERATSLDRKDD
  D39             VNEAKRESKSLKKEALLEAKEEARKYREEVDAEFKSERQELKQIESRLTERATSLDRKDD
  D39V            VNEAKRESKSLKKEALLEAKEEARKYREEVDAEFKSERQELKQIESRLTERATSLDRKDD
  Hungary19A-6    VNEAKRESKSLKKEALLEAKEEARKYREEVDAEFKSERQELKQIESRLTERATSLDRKDD
  EF3030          VNEAKRESKSLKKEALLEAKEEARKYREEVDAEFKSERQELKQIESRLTERATSLDRKDD
                  ************************************************************
  
  TIGR4           NLTSKEQTLEQKEQSISDRAKNLDAREEQLEEVERQKEAELERIGALSQAEARDIILAQT
  D39             NLTSKEQTLEQKEQSISDRAKNLDAREEQLEEVERQKEAELERIGALSQAEARDIILAQT
  D39V            NLTSKEQTLEQKEQSISDRAKNLDAREEQLEEVERQKEAELERIGALSQAEARDIILAQT
  Hungary19A-6    NLTSKEQTLEQKEQSISDRAKNLDAREEQLEEVERQKEAELERIGALSQAEARDIILAQT
  EF3030          NLTSKEQTLEQKEQSISDRAKNLDAREEQLEEVERQKEAELERIGALSQAEARDIILAQT
                  ************************************************************
  
  TIGR4           EENLTREIASRIREAEQEVKERSDKMAKDILVQAMQRIAGEYVAESTNSTVHLPDDTMKG
  D39             EENLTREIASRIREAEQEVKERSDKMAKDILVQAMQRIAGEYVAESTNSTVHLPDDTMKG
  D39V            EENLTREIASRIREAEQEVKERSDKMAKDILVQAMQRIAGEYVAESTNSTVHLPDDTMKG
  Hungary19A-6    EENLTREIASRIREAEQEVKERSDKMAKDILVQAMQRIAGEYVAESTNSTVHLPDDTMKG
  EF3030          EENLTREIASRIREAEQEVKERSDKMAKDILVQAMQRIAGEYVAESTNSTVHLPDDTMKG
                  ************************************************************
  
  TIGR4           RIIGREGRNIRTFESLTGVDVIIDDTPEVVTLSGFDPIRREIARMTMEMLLKDGRIHPAR
  D39             RIIGREGRNIRTFESLTGVDVIIDDTPEVVTLSGFDPIRREIARMTMEMLLKDGRIHPAR
  D39V            RIIGREGRNIRTFESLTGVDVIIDDTPEVVTLSGFDPIRREIARMTMEMLLKDGRIHPAR
  Hungary19A-6    RIIGREGRNIRTFESLTGVDVIIDDTPEVVTLSGFDPIRREIARMTMEMLLKDGRIHPAR
  EF3030          RIIGREGRNIRTFESLTGVDVIIDDTPEVVTLSGFDPIRREIARMTMEMLLKDGRIHPAR
                  ************************************************************
  
  TIGR4           IEELVEKNRQEIDNKIREYGEAAAYEIGAPNLHPDLMKIMGRLQFRTSYGQNVLRHSIEV
  D39             IEELVEKNRQEIDNKIREYGEAAAYEIGAPNLHPDLMKIMGRLQFRTSYGQNVLRHSIEV
  D39V            IEELVEKNRQEIDNKIREYGEAAAYEIGAPNLHPDLMKIMGRLQFRTSYGQNVLRHSIEV
  Hungary19A-6    IEELVEKNRQEIDNKIREYGEAAAYEIGAPNLHPDLMKIMGRLQFRTSYGQNVLRHSIEV
  EF3030          IEELVEKNRQEIDNKIREYGEAAAYEIGAPNLHPDLMKIMGRLQFRTSYGQNVLRHSIEV
                  ************************************************************
  
  TIGR4           AKLAGIMASELGENAALARRAGFLHDIGKAIDHEVEGSHVEIGMELARKYKEPPVVVNTI
  D39             AKLAGIMASELGENAALARRAGFLHDIGKAIDHEVEGSHVEIGMELARKYKEPPVVVNTI
  D39V            AKLAGIMASELGENAALARRAGFLHDIGKAIDHEVEGSHVEIGMELARKYKEPPVVVNTI
  Hungary19A-6    AKLAGIMASELGENAALARRAGFLHDIGKAIDHEVEGSHVEIGMELARKYKEPPVVVNTI
  EF3030          AKLAGIMASELGENAALARRAGFLHDIGKAIDHEVEGSHVEIGMELARKYKEPPVVVNTI
                  ************************************************************
  
  TIGR4           ASHHGDVEAESVIAVIVAAADALSAARPGARSESLESYIKRLHDLEEIANGFEGVQTSFA
  D39             ASHHGDVEAESVIAVIVAAADALSAARPGARSESLESYIKRLHDLEEIANGFEGVQTSFA
  D39V            ASHHGDVEAESVIAVIVAAADALSAARPGARSESLESYIKRLHDLEEIANGFEGVQTSFA
  Hungary19A-6    ASHHGDVEAESVIAVIVAAADALSAARPGARSESLESYIKRLHDLEEIANGFEGVQTSFA
  EF3030          ASHHGDVEAESVIAVIVAAADALSAARPGARSESLESYIKRLHDLEEIANGFEGVQTSFA
                  ************************************************************
  
  TIGR4           LQAGREIRIMVNPGKIKDDKVTILAHKVRKKIENNLDYPGNIKVTVIRELRAVDYAK
  D39             LQAGREIRIMVNPGKIKDDKVTILAHKVRKKIENNLDYPGNIKVTVIRELRAVDYAK
  D39V            LQAGREIRIMVNPGKIKDDKVTILAHKVRKKIENNLDYPGNIKVTVIRELRAVDYAK
  Hungary19A-6    LQAGREIRIMVNPGKIKDDKVTILAHKVRKKIENNLDYPGNIKVTVIRELRAVDYAK
  EF3030          LQAGREIRIMVNPGKIKDDKVTILAHKVRKKIENNLDYPGNIKVTVIRELRAVDYAK
                  *********************************************************