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PangenomeTIGR4
serotype 4
D39serotype 2
D39Vserotype 2
Hungary19A-6serotype 19A
EF3030serotype 19F
670-6Bserotype 6B
6A-10serotype 6A
70585serotype 5
A026serotype 19F
A66serotype 3
AP200serotype 11A
ASP0581serotype 12F
ATCC 49619serotype 19F
ATCC 700669serotype 23F
BM6001serotype 19F
BVJ1JLserotype 1
CGSP14serotype 14
G54serotype 19F
HU-OHserotype 3
Hu15serotype 19A
Hu17serotype 19A
INV104serotype 1
INV200serotype 14
JJAserotype 14
MDRSPN001serotype 19F
NCTC7465serotype 1
NCTC7466serotype 2
NU83127serotype 4
OXC141serotype 3
P1031serotype 1
R6serotype 2
SP49serotype 19A
SPN032672serotype 1
SPN034156serotype 3
SPN034183serotype 3
SPN994038serotype 3
SPN994039serotype 3
SPNA45serotype 3
ST556serotype 19F
TCH8431/19Aserotype 19A
Taiwan19F-14serotype 19F
Xen35serotype 4
gamPNI0373serotype 1
⊟Summary[edit | edit source]
- pan ID?: PNEUPAN003206000
- symbol?: gspA_5
- synonym:
- description?: SP_1767 family glycosyltransferase
- SP_1767 family glycosyltransferase
- glycosyl transferase, family 8
- glycosyl transferase
- putative glycosyltransferase
- exopolyphosphatase
- General stress protein A
- glycosyl transferase 8 family protein
descriptions from strain specific annotations:
- strand?: -
- coordinates?: 4136629..4140225
- occurrence?: in 37% of 43 strains
⊟Orthologs[edit | edit source]
A026:
—
A66:
—
AP200:
—
G54:
—
gamPNI0373:
—
HU-OH:
—
OXC141:
—
P1031:
—
R6:
—
SPN034183:
—
SPN994038:
—
SPN994039:
—
SPNA45:
—
ST556:
—
Taiwan19F-14:
—
⊟Genome Viewer[edit | edit source]
| TIGR4 | |
| Hungary19A-6 | |
| EF3030 |
⊟Alignments[edit | edit source]
- alignment of orthologues: CLUSTAL format alignment by MAFFT L-INS-i (v7.505)
TIGR4 MNKTIVLAGDRNYTRQLETTIKSILYHNRDVKIYILNQDIMPDWFRKPRKIARMLGSEII
Hungary19A-6 MIKTIVLAGDRNYIRQLETTIKSILYHNRDVKIYILNQDIMPDWFRKPRKIARMLGSEII
EF3030 MNKTIVLAGDRNYTRQLETTIKSILYHNRDVKIYILNQDIMPDWFRKPRKIARMLGSEII
* *********** **********************************************
TIGR4 DVKLPEQTVFQDWEKQDHISSITYARYFIADYIQEDKVLYLDSDLIVNTSLEKLFSICLE
Hungary19A-6 DVKLPEQTVFQDWEKQDHISSITYARYFIADYIQEDKVLYLDSDLIVNTSLEKLFSICLE
EF3030 DVKLPEQTVFQDWEKQDHISSITYARYFIADYIQEDKVLYLDSDLIVNTSLEKLFSICLE
************************************************************
TIGR4 EKSLAAVKDTDGITFNAGVLLINNKKWRQEKLKERLIEQSIVTMKEVEEGRFEHFNGDQT
Hungary19A-6 EKSLAAVKDTDGITFNTGVLLINNKKWRQEKLKERLIEQSIVTMKEVEEGRFEHFNGDQT
EF3030 EKSLAAVKDTDGITFNTGVLLINNKKWRQEKLKERLIEQSIVTMKEVEEGRFEHFNGDQT
****************:*******************************************
TIGR4 IFNQVLQDDWLELGRAYNLQVGHDIVALYNNWQEHLAFNDKPVVIHFTTYRKPWTTLTAN
Hungary19A-6 IFNQVLQDDWLELGRAYNLQVGHDIVALYNNWQEHLAFNDKPVVIHFTTYRKPWTTLTAN
EF3030 IFNQVLQDDWLELGRAYNLQVGHDIVALYNNWQEHLAFNDKPVVIHFTTYRKPWTTLTAN
************************************************************
TIGR4 RYRDLWWEFHDLEWSQILQHHMGEFELISPLDKEFSCLTLTNSQDLEGIEELVTALPEVV
Hungary19A-6 RYRDLWWKFHDLEWSQILQHHMGEFELTSSLDKEFSCLTLTNSQDLEGIEELVTALPDVV
EF3030 RYRDLWWEFHDLEWSQILQHHMEEFELISPLDKEFSCLTLTNSQDLEGIEELVTALPEVV
*******:************** **** *.***************************:**
TIGR4 FHIAAWTDMGDKLKKLAVYNNVRLHPQIVPPVLDKLKKSTNLYLDINHGSADENFLKSLQ
Hungary19A-6 FHIAAWTDMGDKLTKLAVYDNVRLHPQIVPPVLDKLERSVDLYLDINYSHVVGTILEDMK
EF3030 FHIAAWTDMGDKLKKLAVYNNVRLHPQIVPPVLDKLKKSTNLYLDINHGSADENFLKSLQ
*************.*****:****************::*.:******:. . .:*:.::
TIGR4 EQEKTLLAFQSTQHGELGQIVFENGKVSFMIDTIKDFKKNGHLTCFRQLPSLTCLTFTAS
Hungary19A-6 ILEKPILSFDTTEHGNTGQLVFKKDEVSVMVQAIKDYRRDGRFLSCYEGSDFHCLTFTNS
EF3030 EQEKTLLAFQSTQHGELGQIVFENGKVSFMIDTIKDFKKNGHLTCFRQLPSLTCLTFTAS
**.:*:*::*:**: **:**::.:**.*:::***::::*:: . : ..: ***** *
TIGR4 QYIEQLDYLAGQLPNVVFQIAAWTAMGPKLYDLSNRYPNIQLYPAISRDKLDELKEKMDA
Hungary19A-6 QELQKIDYLVKNFPMVTFHIAAWTVMGPMLQELAKKYKNVKLYPEVKSDQFEELKSQMDV
EF3030 QDIEQLDYLAGQLPNVVFQVAAWTAMGPKLYDLSNRYPNIQLYPAISRDKLDELKEKMDA
* ::::***. ::* *.*::****.*** * :*:::* *::*** :. *:::***.:**.
TIGR4 YLDINLLTSTSDIVAEMAHLSKPILAFYKSQNGNNGQRLYSSEHPERMLADLQKLITKDM
Hungary19A-6 YLDINLHNSTSEVVKEISSLNKPMLAFYTSQNGNHGQHLYSSEHPERLLQAFHALIKGET
EF3030 YLDINLLTSTSDIVAEMAHLSKPILAFYKSQNGNNGQRLYSSEHPERMLADLQKLITKDM
****** .***::* *:: *.**:****.*****:**:*********:* :: **. :
TIGR4 LEKPLDIIQVKGIDETLDYIIEHNSSLVRFGDGEINMLAGHSIPYQDYDEELVSIMRDII
Hungary19A-6 LGEPEKPIKVIGIDQTLDYVIKNKSSLVRFGDGEVNLMWGLPIPYQNHDLELANQLKHIV
EF3030 LEKPLDIIQVKGIDETLDYIIEHNSSLVRFGDGEVNLMWGLPIPYQNHDLELANQLKHIV
* :* . *:* ***:****:*:::**********:*:: * .****::* **.. ::.*:
TIGR4 GQESREDLVVCLPDAFTDRFRFTSWAIPFWKDHMDHYMDFYRELCSDSWYGSTFVSRPYI
Hungary19A-6 GLESDEKLVVCLPDAFDDRFVFTWWATPFWKEHMNVYMDFYKELCKGSWYGSTFISRPYI
EF3030 GLESDEKLVVCLPDAFDDRFVFTWWATPFWKEHMNVYMDFYKELCKGSWYGSTFISRPYI
* ** *.********* *** ** ** ****:**: *****:***..*******:*****
TIGR4 DFEDKSQAKAQFEKLKSIWENRDLLIVEGATSRSGVGNDLFDEANSIKRIICPSHSAFSR
Hungary19A-6 DYEDKSKAKGQFEKLKSIWENRDILIVEGITSRSGVGNDLFDKVKSVKRIICPSHNAYSV
EF3030 DYEDKSKAKGQFEKLKSIWENRDILIVEGITSRSGVGNDLFDKVKSVKRIICPSHNAYSV
*:****:**.*************:***** ************:.:*:********.*:*
TIGR4 VHELEQEIEKYAGGRLILCMLGPTAKVLSYNLCQMGYQVLDVGHIDSEYEWMKMGAKTKV
Hungary19A-6 VDSIQEEIMKHAEGRLILCMLGPTAKVLSYNLCQMGYQVLDVGHIDSEYEWMKMGAKTKV
EF3030 VDNIQEEIMKHAEGRLILCMLGPTAKVLSYNLCQMGYQVLDVGHIDSEYEWMKMGAKTKV
*..:::** *:* ***********************************************
TIGR4 KFSHKHTAEHNFDQDIEFIDDETYNSQIVARILN---
Hungary19A-6 KFSHKHTAEHNFDQDIEFIDDETYNSQILVDLSKREV
EF3030 KFSHKHTAEHNFDQDIEFIDDETYNSQILVDLSKREV
****************************:. : :