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PangenomeTIGR4
serotype 4
D39serotype 2
D39Vserotype 2
Hungary19A-6serotype 19A
EF3030serotype 19F
670-6Bserotype 6B
6A-10serotype 6A
70585serotype 5
A026serotype 19F
A66serotype 3
AP200serotype 11A
ASP0581serotype 12F
ATCC 49619serotype 19F
ATCC 700669serotype 23F
BVJ1JLserotype 1
CGSP14serotype 14
G54serotype 19F
HU-OHserotype 3
Hu15serotype 19A
Hu17serotype 19A
INV104serotype 1
INV200serotype 14
JJAserotype 14
MDRSPN001serotype 19F
NCTC7466serotype 2
NU83127serotype 4
OXC141serotype 3
P1031serotype 1
R6serotype 2
SP49serotype 19A
SPN032672serotype 1
SPN034156serotype 3
SPN034183serotype 3
SPN994038serotype 3
SPN994039serotype 3
SPNA45serotype 3
ST556serotype 19F
TCH8431/19Aserotype 19A
Taiwan19F-14serotype 19F
Xen35serotype 4
gamPNI0373serotype 1
⊟Summary[edit | edit source]
- pan ID?: PNEUPAN003233000
- symbol?: Pn-aqpA
- synonym:
- description?: MIP/aquaporin family protein
- MIP/aquaporin family protein
- Aquaporin Z - water channel protein
- aquaporin
- Aquaporin Z
- Aquaporin Z 2
- Glycerol uptake facilitator-like permeases (Major Intrinsic Protein Family)
- major intrinsic family protein
- MIP family channel protein
- porin
descriptions from strain specific annotations:
- strand?: -
- coordinates?: 4141040..4141675
- occurrence?: in 98% of 41 strains
⊟Orthologs[edit | edit source]
⊟Genome Viewer[edit | edit source]
| TIGR4 | |
| D39 | |
| D39V | |
| Hungary19A-6 | |
| EF3030 |
⊟Alignments[edit | edit source]
- alignment of orthologues: CLUSTAL format alignment by MAFFT L-INS-i (v7.505)
TIGR4 MKKFVAELIGTFMFVFVGTGAVVFGNGLDGLGHLGIAFAFGLAIVVAAYSIGTVSGAHLN
D39 MKKFVAELIGTFMLVFVGTGAVVFGNGLDGLGHLGIAFAFGLAIVVAAYSIGTVSGAHLN
D39V MKKFVAELIGTFMLVFVGTGAVVFGNGLDGLGHLGIAFAFGLAIVVAAYSIGTVSGAHLN
Hungary19A-6 MKKFVAELIGTFMLVFVGTGAVVFGNSLDGLGHLGIAFAFGLAIVVAAYSIGTVSGAHLN
EF3030 MKKFVAELIGTFMLVFVGTGAIVFGNGFDGLGHLGIAFAFGLAIVVAAYSIGTVSGAHLN
*************:*******:****.:********************************
TIGR4 PAVSIAMFVNKRLSSSELVNYILGQVVGAFIASGAVFFLLANSGMSTASLGENALANGVT
D39 PAVSIAMFVNKRLSSSELVNYILGQVVGAFIASGAVFFLLANSGMSTASLGENALANGVT
D39V PAVSIAMFVNKRLSSSELVNYILGQVVGAFIASGAVFFLLANSGMSTASLGENALANGVT
Hungary19A-6 PAVSIAMFVNKRLSSSELVNYILGQVVGAFIASGAVFFLLANSGMSTASLGENALANGVT
EF3030 PAVSIAMFVNKRLSSSELVNYILGQVVGAFIASGAVFFLLANSGMSTASLGENALANGVT
************************************************************
TIGR4 VFGGFLFEVIATFLFVLVIMTVTSESKGNGAIAGLVIGLSLMAMILVGLKITGLSVNPAR
D39 VFGGFLFEVIATFLFVLVIMTVTSESKGNGAIAGLVIGLSLMAMILVGLKITGLSVNPAR
D39V VFGGFLFEVIATFLFVLVIMTVTSESKGNGAIAGLVIGLSLMAMILVGLKITGLSVNPAR
Hungary19A-6 VFGGFLFEVIATFLFVLVIMTVTSESKGNGAIAGLVIGLSLMAMILVGLKITGLSVNPAR
EF3030 VFGGFLFEVIATFLFVLVIMTVTSESKGNGAIAGLVIGLSLMAMILVGLKITGLSVNPAR
************************************************************
TIGR4 SLAPAVLVGGAALQQVWIFILAPIAGGVLAALVAKNFLGTEE
D39 SLAPAVLVGGAALQQVWIFILAPIAGGVLAALVAKNFLGTEE
D39V SLAPAVLVGGAALQQVWIFILAPIAGGVLAALVAKNFLGTEE
Hungary19A-6 SLAPAVLVGGAALQQVWIFILAPIAGGVLAALVAKNFLGTEE
EF3030 SLAPAVLVGGAALQQVWIFILAPIAGGVLAALVAKNFLGTEE
******************************************