From PneumoWiki
Jump to navigation Jump to search
PangenomeTIGR4
serotype 4
D39
serotype 2
D39V
serotype 2
Hungary19A-6
serotype 19A
EF3030
serotype 19F
670-6B
serotype 6B
6A-10
serotype 6A
70585
serotype 5
A026
serotype 19F
A66
serotype 3
AP200
serotype 11A
ASP0581
serotype 12F
ATCC 49619
serotype 19F
ATCC 700669
serotype 23F
BVJ1JL
serotype 1
CGSP14
serotype 14
G54
serotype 19F
HU-OH
serotype 3
Hu15
serotype 19A
Hu17
serotype 19A
INV104
serotype 1
INV200
serotype 14
JJA
serotype 14
MDRSPN001
serotype 19F
NCTC7466
serotype 2
NU83127
serotype 4
OXC141
serotype 3
P1031
serotype 1
R6
serotype 2
SP49
serotype 19A
SPN032672
serotype 1
SPN034156
serotype 3
SPN034183
serotype 3
SPN994038
serotype 3
SPN994039
serotype 3
SPNA45
serotype 3
ST556
serotype 19F
TCH8431/19A
serotype 19A
Taiwan19F-14
serotype 19F
Xen35
serotype 4
gamPNI0373
serotype 1

Summary[edit | edit source]

  • pan ID?: PNEUPAN003346000
  • symbol?: galT-2
  • synonym:
  • description?: UDP-glucose--hexose-1-phosphate uridylyltransferase

      descriptions from strain specific annotations:

    • UDP-glucose--hexose-1-phosphate uridylyltransferase
    • galactose-1-phosphate uridylyltransferase
    • galactose-1-phosphate uridylyltransferase 2
    • UTP--hexose-1-phosphate uridylyltransferase
    • Galactose-1-phosphate uridyltransferase
    • peptidase S24
  • strand?: -
  • coordinates?: 4291468..4292949
  • occurrence?: in 100% of 41 strains

Orthologs[edit | edit source]

Genome Viewer[edit | edit source]

TIGR4
D39
D39V
Hungary19A-6
EF3030

Alignments[edit | edit source]

  • alignment of orthologues:
    CLUSTAL format alignment by MAFFT L-INS-i (v7.505)


    TIGR4           MTLVNKFVTHVISESSFEEMDRIYLTNRVLARVGEGVLEVETNLDKLIDLKDQLVEEAVR
    D39             MTLVDKFVTHVISESSFEEMDRIYLTNRVLSRVGEGVLEVETNLDKLIDLKDQLVEETVR
    D39V            MTLVDKFVTHVISESSFEEMDRIYLTNRVLSRVGEGVLEVETNLDKLIDLKDQLVEETVR
    Hungary19A-6    MILVDKFVTHVISESSFEEMDRIYLTNRVLARVGEGVLEVETNLDKLIDLKDQLVEEAVR
    EF3030          MTLVDKFVTHVISESSFEEMDRIYLTNRVLARVGEGVLEVETNLDKLIDLKDQLVEEAVR
                    * **:*************************:**************************:**

    TIGR4           LETIEDSQTAREILGAELMDLVTPCPSQVNRDFWATYAHSPEQAIEDFYQLSQKNDYIKL
    D39             LETIEDSQTAREILGTELMDLVTPCPSQVNRDFWEAYAYSPEQAIEDFYQLSQKNDYIKL
    D39V            LETIEDSQTAREILGTELMDLVTPCPSQVNRDFWEAYAYSPEQAIEDFYQLSQKNDYIKL
    Hungary19A-6    LETIEDSQTAREILGTELMDLVTPCPSQVNRDFWEAYAYSPEQAIEDFYQLSQKNDYIKL
    EF3030          LETIEDSQTAREILGTELMDLVTPCPSQVNRDFWEAYAYSPEQAIEDFYQLSQKNDYIKL
                    ***************:****************** :**:*********************

    TIGR4           KAIARNIAYRVPSDYGELEITINLSKPEKDPKEIVAAKLVQASNYPQCQLCLENEGYHGR
    D39             KAIAKNIAYRVPSDYGELEITINLSKPEKDPKEIAVAKLVQASNYPQCQLCLENEGYHGR
    D39V            KAIAKNIAYRVPSDYGELEITINLSKPEKDPKEIAVAKLVQASNYPQCQLCLENEGYHGR
    Hungary19A-6    KAIAKNIAYRVPSDYGELEITINLSKPEKDPKEIAAAKLVQASNYPQCQLCLENEGYHGR
    EF3030          KAIAKNIAYRVPSDYGELEITINLSKPEKDPKEIAVAKLVQASNYPQCQLCLENEGYHGR
                    ****:*****************************..************************

    TIGR4           VNHPARSNHRIIRFEMVGQEWGFQYSPYAYFNEHCIFLDGQHRPMAISRQSFERLLAIVD
    D39             VNHPARSNHRIIRFEMVGQEWGFQYSPYAYFNEHCIFLDGQHRPMAISRQSFERLLAIVE
    D39V            VNHPARSNHRIIRFEMVGQEWGFQYSPYAYFNEHCIFLDGQHRPMAISRQSFERLLAIVE
    Hungary19A-6    VNHPARTNHRIIRFEMVGQEWGFQYSPYAYFNEHCIFLDGQHRPMAISRQSFERLLAIVE
    EF3030          VNHPARSNHRIIRFEMVGQEWGFQYSPYAYFNEHCIFLDGQHRPMAISRQSFERLLAIVE
                    ******:****************************************************:

    TIGR4           QFPGYFAGSNADLPIVGGSILTHDHYQGGRHVFPMELAPLQKAFRFAGFEQVKAGIVKWP
    D39             QFPGYFAGSNADLPIVGGSILTHDHYQGGRHVFPMELAPLQKTFRFAGFEQVKAGIIKWP
    D39V            QFPGYFAGSNADLPIVGGSILTHDHYQGGRHVFPMELAPLQKTFRFAGFEQVKAGIIKWP
    Hungary19A-6    QFPGYFAGSNADLPIVGGSILTHDHYQGGRHVFPMELAPLQKTFRFAGFEQVKAGIIKWP
    EF3030          QFPGYFAGSNADLPIVGGSILTHDHYQGGRHVFPMELAPLQKTFRFAGFEQVKAGIIKWP
                    ******************************************:*************:***

    TIGR4           MSVLRLTSDSKEDLINLADKILQEWRQYSDPAVQILAETDRTPHHTITPIARKRDGQFEL
    D39             MSVLRLTSDSKEDLINLADKIFQEWRQYSDSSVQILAETDGTPHHTITPIARKRDGQFEL
    D39V            MSVLRLTSDSKEDLINLADKIFQEWRQYSDSSVQILAETDGTPHHTITPIARKRDGQFEL
    Hungary19A-6    MSVLRLTSDSKEDLINLADKIFQEWRQYSDSSVQILAETDGTPHHTITPIARKRDGQFEL
    EF3030          MSVLRLTSDSKEDLINLADKIFQEWRQYSDSSVQILAETDGTPHHTITPIARKRDGQFEL
                    *********************:********.:******** *******************

    TIGR4           DLVLRDNQTSAEYPDGIYHPHKDVQHIKKENIGLIEVMGLAILPPRLKEEVEQVASYLVG
    D39             DLVLRDNQTSAEHPDGIYHPHKDVQHIKKENIGLIEVMGLAILPPRLKEEVEQVASYLVG
    D39V            DLVLRDNQTSAEHPDGIYHPHKDVQHIKKENIGLIEVMGLAILPPRLKEEVEQVASYLVG
    Hungary19A-6    DLVLRDNQTSAEHPDGIYHPHKDVQHIKKENIGLIEVMGLAILPPRLKEEVEQVASYLVG
    EF3030          DLVLRDNQTSAEHPDGIYHPHKDVQHIKKENIGLIEVMGLAILPPRLKEEVEQVASYLVG
                    ************:***********************************************

    TIGR4           EAVTVADYHQEWADQLKSQHPDLTDKEKALAIVKDSVGAIFARVLEDAGVYKQTEQGQTA
    D39             EAVTVADYHQEWADQLKSQHPDLTDKEKALAIVKDSVGAIFVRVLEDAGVYKQTEQGQTA
    D39V            EAVTVADYHQEWADQLKSQHPDLTDKEKALAIVKDSVGAIFVRVLEDAGVYKQTEQGQTA
    Hungary19A-6    EAVTVADYHQEWADQLKSQHPDLTDKEKALAIVKDSVGAIFVRVLEDAGVYKQTEQGQAA
    EF3030          EAVTVADYHQEWADQLKSQHPDLTDKEKALAIVKDSVGAIFVRVLEDAGVYKQTEQGQTA
                    *****************************************.****************:*

    TIGR4           FMRFVEQVGILLD
    D39             FMRFVEQVGILLD
    D39V            FMRFVEQVGILLD
    Hungary19A-6    FMRFVEQVGISLD
    EF3030          FMRFVEQVGISLD
                    ********** **