PangenomeTIGR4

serotype 4

D39

serotype 2

D39V

serotype 2

Hungary19A-6

serotype 19A

EF3030

serotype 19F

670-6B

serotype 6B

6A-10

serotype 6A

70585

serotype 5

A026

serotype 19F

A66

serotype 3

AP200

serotype 11A

ASP0581

serotype 12F

ATCC 49619

serotype 19F

ATCC 700669

serotype 23F

BM6001

serotype 19F

BVJ1JL

serotype 1

CGSP14

serotype 14

G54

serotype 19F

HU-OH

serotype 3

Hu15

serotype 19A

Hu17

serotype 19A

INV104

serotype 1

INV200

serotype 14

JJA

serotype 14

MDRSPN001

serotype 19F

NCTC7465

serotype 1

NCTC7466

serotype 2

NU83127

serotype 4

OXC141

serotype 3

P1031

serotype 1

R6

serotype 2

SP49

serotype 19A

SPN032672

serotype 1

SPN034156

serotype 3

SPN034183

serotype 3

SPN994038

serotype 3

SPN994039

serotype 3

SPNA45

serotype 3

ST556

serotype 19F

TCH8431/19A

serotype 19A

Taiwan19F-14

serotype 19F

Xen35

serotype 4

gamPNI0373

serotype 1

⊟Summary

• pan ID^?: PNEUPAN003357000
• symbol^?: ABC-N/P_5
• synonym:
• description^?: ABC transporter ATP-binding protein

  descriptions from strain specific annotations:

  • ABC transporter ATP-binding protein
  • ABC transporter, ATP-binding/permease protein
  • ABC transporter, ATP-binding protein
  • multidrug ABC transporter ATP-binding protein
  • putative multidrug resistance ABC transporter
  • ABC transporter, permease/ATP-binding protein
  • ABC transporter ATP-binding/membrane spanning protein - unknown substrate
  • ABC transporter ATP-binding protein/permease
  • ABC transporter family protein
  • ABC-type multidrug transport system, ATPase and permease component
  • Lipid A export ATP-binding/permease protein MsbA
  • putative multidrug resistance ABC transporter ATP-binding/permease protein YheH
• strand^?: -
• coordinates^?: 4409124..4410876
• occurrence^?: in 100% of 43 strains

⊟Orthologs

(4)^?
TIGR4:
SP_RS09120
(2)
D39:
SPD_RS08645
(2)
D39V:
SPV_RS08640
(19A)
Hungary19A-6:
SPH_RS09540
(19F)
EF3030:
EF3030_RS08820
(6B)^?
670-6B:
SP670_RS09520
(6A)
6A-10:
HKM25_RS09180
(5)
70585:
SP70585_RS09410
(19F)
A026:
T308_RS08515
(3)
A66:
A66_RS08160
(11A)
AP200:
SPAP_RS09100
(12F)
ASP0581:
EL334_RS09330
(19F)
ATCC 49619:
EL263_RS08905
(23F)
ATCC 700669:
SPN23F_RS09370
(19F)
BM6001:
ODS73_RS09525
(1)
BVJ1JL:
JN057_RS08860
(14)
CGSP14:
SPCG_RS09405
(19F)
G54:
SPG_RS08620
(1)
gamPNI0373:
HMPREF1038_RS08860
(3)
HU-OH:
EL271_RS08915
(19A)
Hu15:
SPNHU15_RS08780
(19A)
Hu17:
SPNHU17_RS08765
(1)
INV104:
INV104_RS09075
(14)
INV200:
SPNINV200_RS08825
(14)
JJA:
SPJ_RS08670
(19F)
MDRSPN001:
MDRSPN_RS08315
(1)
NCTC7465:
AT689_RS04900
(2)
NCTC7466:
DQM66_RS08640
(4)
NU83127:
EL277_RS09320
(3)
OXC141:
SPNOXC_RS08745
(1)
P1031:
SPP_RS09075
(2)
R6:
SPR_RS08235
(19A)
SP49:
BMJ42_RS09745
(1)
SPN032672:
SPN032672_RS03960
(3)
SPN034156:
SPN034156_RS03715
(3)
SPN034183:
SPN034183_RS08770
(3)
SPN994038:
SPN994038_RS08670
(3)
SPN994039:
SPN994039_RS08675
(3)
SPNA45:
SPNA45_RS02440
(19F)
ST556:
MYY_RS08955
(19F)
Taiwan19F-14:
SPT_RS08750
(19A)
TCH8431/19A:
HMPREF0837_RS09890
(4)
Xen35:
CXP32_RS09215

⊟Genome Viewer

TIGR4
D39
D39V
Hungary19A-6
EF3030

⊟Alignments

• alignment of orthologues:
  CLUSTAL format alignment by MAFFT L-INS-i (v7.505)
  
  
  TIGR4           MQNKQEQWTVLKRLMSYLKPYGLLTFLALSFLLATTVIKSVIPLVASHFIDQYLSNLNQL
  D39             MQNKQEQWTVLKRLMSYLKPYGLLTFLALSFLLATTVIKSVIPLVASHFIDQYLSNLNQL
  D39V            MQNKQEQWTVLKRLMSYLKPYGLLTFLALSFLLATTVIKSVIPLVASHFIDQYLSNLNQL
  Hungary19A-6    MQNKQEQWTVLKRLMSYLKPYGLLTFLALSFLLATTVIKSVIPLVASHFIDQYLSNLNQL
  EF3030          MQNKQEQWTVLKRLMSYLKPYGLLTFLALSFLLATTVIKSVIPLVASHFIDQYLSNLNQL
                  ************************************************************
  
  TIGR4           AVTVLLVYYGLYILQTVVQYVGNLLFARVSYSIVRDIRRDAFANMEKLGMSYFDKTPAGS
  D39             AVTVLLVYYGLYILQTVVQYVGNLLFARVSYSIVRDIRRDAFANMEKLGMSYFDKTPAGS
  D39V            AVTVLLVYYGLYILQTVVQYVGNLLFARVSYSIVRDIRRDAFANMEKLGMSYFDKTPAGS
  Hungary19A-6    AVTVLLVYYGLYILQTVVQYVGNLLFARVSYSIVRDIRRDAFANMEKLGMSYFDKTPAGS
  EF3030          AVTVLLVYYGLYILQTVVQYVGNLLFARVSYSIVRDIRRDAFANMEKLGMSYFDKTPAGS
                  ************************************************************
  
  TIGR4           IVSRLTNDTETISDMFSGILSSFISAVFIFLTTLYTMLVLDFRLTALVLLFLPLIFLLVN
  D39             IVSRLTNDTETISDMFSGILSSFISAVFIFLTTLYTMLVLDFRLTALVLLFLPLIFLLVN
  D39V            IVSRLTNDTETISDMFSGILSSFISAVFIFLTTLYTMLVLDFRLTALVLLFLPLIFLLVN
  Hungary19A-6    IVSRLTNDTETISDMFSGILSSFISAVFIFLTTLYTMLVLDFRLTALVLLFLPLIFLLVN
  EF3030          IVSRLTNDTETISDMFSGILSSFISAVFIFLTTLYTMLVLDFRLTALVLLFLPLIFLLVN
                  ************************************************************
  
  TIGR4           LYRKKSVKIIEKTRSLLSDINSKLAENIEGIRIIQAFNQEKRLQAEFDEINQEHLVYANR
  D39             LYRKKSVKIIEKTRSLLSDINSKLAENIEGIRIIQAFNQEKRLQAEFDEINQEHLAYANR
  D39V            LYRKKSVKIIEKTRSLLSDINSKLAENIEGIRIIQAFNQEKRLQAEFDEINQEHLAYANR
  Hungary19A-6    LYRKKSVKIIEKTRSLLSDINSKLAENIEGIRIIQAFNQEKRLQAEFDEINQEHLAYANR
  EF3030          LYRKKSVKIIEKTRSLLSDINSKLAENIEGIRIIQAFNQEKRLQAEFDEINQEHLAYANR
                  *******************************************************.****
  
  TIGR4           SVALDALFLRPAMSLLKLLGYAVLMAYFGYRGFSIGITVGTMYAFIQYINRLFDPLIEVT
  D39             SVALDALFLRPAMSLLKLLGYAVLMTYFGYRGLSIGITAGTMYAFIQYINRLFDPLIEVT
  D39V            SVALDALFLRPAMSLLKLLGYAVLMTYFGYRGLSIGITAGTMYAFIQYINRLFDPLIEVT
  Hungary19A-6    SVALDALFLRPAMSLLKLLGYAVLMTYFGYRGLSIGITAGTMYAFIQYINRLFDPLIEVT
  EF3030          SVALDALFLRPAMSLLKLLGYAVLMTYFGYRGLSIGITAGTMYAFIQYINRLFDPLIEVT
                  *************************:******:*****.*********************
  
  TIGR4           QNFSTLQTAMVSAGRVFALIDERTYEPLQENGQAKVQEGNIRFEHVCFSYDGKHPILDDI
  D39             QNFSTLQTSMVSAGRVFALIDERTYEPLQENGQAKVKEGNIRFEHVCFSYDGKHPILDDI
  D39V            QNFSTLQTSMVSAGRVFALIDERTYEPLQENGQAKVKEGNIRFEHVCFSYDGKHPILDDI
  Hungary19A-6    QNFSTLQTSMVSAGRVFALIDERTYEPLQENGQAKVKEGNIRFEHVCFSYDGKHPILDDI
  EF3030          QNFSTLQTSMVSAGRVFALIDERTYEPLQENGQAKVKEGNIRFEHVCFSYDGKHPILDDI
                  ********:***************************:***********************
  
  TIGR4           SFSVNKGETIAFVGHTGSGKSSIINVLMRFYEFQSGRVLLDDVDIRDFSQEELRKNIGLV
  D39             SFSVNKGETIAFVGHTGSGKSSIINVLMRFYEFQSGRVLLDDVDIRDFSQEELRKNIGLV
  D39V            SFSVNKGETIAFVGHTGSGKSSIINVLMRFYEFQSGRVLLDDVDIRDFSQEELRKNIGLV
  Hungary19A-6    SFSVNKGETIAFVGHTGSGKSSIINVLMRFYEFQSGRVLLDDVDIRDFSQEELRKNIGLV
  EF3030          SFSVNKGETIAFVGHTGSGKSSIINVLMRFYEFQSGRVLLDDVDIRDFSQEELRKNIGLV
                  ************************************************************
  
  TIGR4           LQEPFLYHGTIKSNIAMYQETSDEQVQAAAAFVDADSFIQELPQGYDSPVSERGSSFSTG
  D39             LQEPFLYHGTIKSNIAMYQEISDEQVQAAAAFVDADSFIQELPQGYDSPVSERGSSFSTG
  D39V            LQEPFLYHGTIKSNIAMYQEISDEQVQAAAAFVDADSFIQELPQGYDSPVSERGSSFSTG
  Hungary19A-6    LQEPFLYHGTIKSNIAMYQEISDEQVQAAAAFVDADSFIQELPQGYDSPVSERGSSFSTG
  EF3030          LQEPFLYHGTIKSNIAMYQEISDEQVQAAAAFVDADSFIQELPQGYDSPVSERGSSFSTG
                  ******************** ***************************************
  
  TIGR4           QRQLLAFARTVASQPKILILDEATANIDSETESLVQASLAKMRQGRTTIAIAHRLSTIQD
  D39             QRQLLAFARTVASQPKILILDEATANIDSETESLVQASLAKMRQGRTTIAIAHRLSTIQD
  D39V            QRQLLAFARTVASQPKILILDEATANIDSETESLVQASLAKMRQGRTTIAIAHRLSTIQD
  Hungary19A-6    QRQLLAFARTVASQPKILILDEATANIDSETESLVQASLAKMRQGRTTIAIAHRLSTIQD
  EF3030          QRQLLAFARTVASQPKILILDEATANIDSETESLVQASLAKMRQGRTTIAIAHRLSTIQD
                  ************************************************************
  
  TIGR4           ANCIYVLDKGRIIESGTHEELLALGGTYHKMYSLQAGAMADTL
  D39             ANCIYVLDKGRIIESGTHEELLTLGGTYHKMYSLQAGAMAYTL
  D39V            ANCIYVLDKGRIIESGTHEELLTLGGTYHKMYSLQAGAMAYTL
  Hungary19A-6    ANCIYVLDKGRIIESGTHEELLALGGTYHKMYSLQAGAMADTL
  EF3030          ANCIYVLDKGRIIESGTHEELLTLGGTYHKMYSLQAGAMAYTL
                  **********************:***************** **