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PangenomeTIGR4
serotype 4
D39serotype 2
D39Vserotype 2
Hungary19A-6serotype 19A
EF3030serotype 19F
670-6Bserotype 6B
6A-10serotype 6A
70585serotype 5
A026serotype 19F
A66serotype 3
AP200serotype 11A
ASP0581serotype 12F
ATCC 49619serotype 19F
ATCC 700669serotype 23F
BVJ1JLserotype 1
CGSP14serotype 14
G54serotype 19F
HU-OHserotype 3
Hu15serotype 19A
Hu17serotype 19A
INV104serotype 1
INV200serotype 14
JJAserotype 14
MDRSPN001serotype 19F
NCTC7466serotype 2
NU83127serotype 4
OXC141serotype 3
P1031serotype 1
R6serotype 2
SP49serotype 19A
SPN032672serotype 1
SPN034156serotype 3
SPN034183serotype 3
SPN994038serotype 3
SPN994039serotype 3
SPNA45serotype 3
ST556serotype 19F
TCH8431/19Aserotype 19A
Taiwan19F-14serotype 19F
Xen35serotype 4
gamPNI0373serotype 1
⊟Summary[edit | edit source]
- pan ID?: PNEUPAN003377000
- symbol?: treP
- synonym:
- description?: PTS system trehalose-specific EIIBC component
- PTS system trehalose-specific EIIBC component
- pts system, trehalose-specific iibc component
- sugar phosphotransferase system (PTS), IIABC component
- trehalose PTS system, IIABC components
- PTS beta-glucoside transporter subunit EIIBCA
- PTS trehalose transporter subunit IIBC
- Phosphotransferase system, trehalose-specific IIBC component
- Phosphotransferase system IIC component, glucose/maltose/N-acetylglucosamine-specific
- PTS system, IIBCA components
- PTS system, trehalose-specific IIABC components
- PTS system, trehalose-specific IIB component / PTS system, trehalose-specific IIC component / PTS system,trehalose-specific IIA component
- PTS system trehalose-specific IIBC component
- PTS system trehalose-specific transporter subunits IIBCA
- PTS trehalose transporter subunit IIABC
- trehalose PTS system, IIABC component
- Trehalose-specific PTS IIBCA components
descriptions from strain specific annotations:
- strand?: -
- coordinates?: 4322408..4324375
- occurrence?: in 100% of 41 strains
⊟Orthologs[edit | edit source]
SPN034156:
SPN034156_RS03945 (treP)
SPN034183:
SPN034183_RS08990 (treP)
SPN994038:
SPN994038_RS08895 (treP)
⊟Genome Viewer[edit | edit source]
| TIGR4 | |
| D39 | |
| D39V | |
| Hungary19A-6 | |
| EF3030 |
⊟Alignments[edit | edit source]
- alignment of orthologues: CLUSTAL format alignment by MAFFT L-INS-i (v7.505)
TIGR4 MGKFEQEAKDLLQAIGGKENVTAVTHCATRMRFVLGDDKKANVKAIESIPAVKGTFTNAG
D39 MGKFEQEAKDLLQAIGGKENVTAVTHCATRMRFVLGDDKKANVKAIESIPAVKGTFTNAG
D39V MGKFEQEAKDLLQAIGGKENVTAVTHCATRMRFVLGDDKKANVKAIESIPAVKGTFTNAG
Hungary19A-6 MGKFEQEAKDLLQAIGGKENVTAVTHCATRMRFVLGDDKKANVKAIESIPAVKGTFTNAG
EF3030 MGKFEQEAKDLLQAIGGKENVTAVTHCATRMRFVLGDDKKANVKAIESIPAVKGTFTNAG
************************************************************
TIGR4 QFQVIIGNDVPIFYNDFTAVSGIEGVSKEAAKSAAKSNQNVVQGVMTTLAEIFTPIIPAL
D39 QFQVIIGNDVPIFYNDFTAVSGIEGVSKEAAKSAAKSNQNVVQGVMTTLAEIFTPIIPAL
D39V QFQVIIGNDVPIFYNDFTAVSGIEGVSKEAAKSAAKSNQNVVQGVMTTLAEIFTPIIPAL
Hungary19A-6 QFQVIIGNDVPIFYNDFTAVSGIEGVSKEAAKSAAKSNQNVVQRVMTTLAEIFTPIIPAL
EF3030 QFQVIIGNDVPIFYNDFTAVSGIEGVSKEAAKSAAKSNQNVVQRVMTTLAEIFTPIIPAL
******************************************* ****************
TIGR4 IVGGLILGFRNVLEGVHWSMLDGKTITESSQFWAGVNHFLWLPGEAIFQFLPVGITWSVS
D39 IVGGLILGFRNVLEGVHWSMLDGKTITESSQFWAGVNHFLWLPGEAIFQFLPVGITWSVS
D39V IVGGLILGFRNVLEGVHWSMLDGKTITESSQFWAGVNHFLWLPGEAIFQFLPVGITWSVS
Hungary19A-6 IVGGLILGFRNVLEGVHWSMLDGKTITESSQFWAGVNHFLWLPGEAIFQFLPVGITWSVS
EF3030 IVGGLILGFRNVLEGVHWSMLDGKTITESSQFWAGVNHFLWLPGEAIFQFLPVGITWSVS
************************************************************
TIGR4 RKMGTSQILGIVLGICLVSPQLLNAYAVASTPAADIAANWVWNFGYFTVNRIGYQAQVIP
D39 RKMGTSQILGIVLGICLVSPQLLNAYAVASTPAADIAANWVWNFGYFTVNRIGYQAQVIP
D39V RKMGTSQILGIVLGICLVSPQLLNAYAVASTPAADIAANWVWNFGYFTVNRIGYQAQVIP
Hungary19A-6 RKMGTSQILGIVLGICLVSPQLLNAYAVASTPAADIAANWVWNFGYFTVNRIGYQAQVIP
EF3030 RKMGTSQILGIVLGICLVSPQLLNAYAVASTPAADIAANWVWNFGYFTVNRIGYQAQVIP
************************************************************
TIGR4 ALLAGLSLSYLEIFWHKHIPEVISMIFVPFLSLIPALILAHTVLGPIGWTIGQGLSSVVL
D39 ALLAGLSLSYLEIFWRKHIPEVISMIFVPFLSLIPALILAHTVLGPIGWTIGQGLSSVVL
D39V ALLAGLSLSYLEIFWRKHIPEVISMIFVPFLSLIPALILAHTVLGPIGWTIGQGLSSVVL
Hungary19A-6 ALLAGLSLSYLEIFWRKHIPEVISMIFVPFLSLIPALILAHTVLGPIGWTIGQGLSSVVL
EF3030 ALLAGLSLSYLEIFWRKHIPEVISMIFVPFLSLIPALILAHTVLGPIGWTIGQGLSSVVL
***************:********************************************
TIGR4 AGLTGPVKWLFGAIFGALYAPFVITGLHHMTNAIDTQLIADAGGTALWPMIALSNIAQGS
D39 AGLTGPVKWLFGAIFGALYAPFVITGLHHMTNAIDTQLIADAGGTALWPMIALSNIAQGS
D39V AGLTGPVKWLFGAIFGALYAPFVITGLHHMTNAIDTQLIADAGGTALWPMIALSNIAQDS
Hungary19A-6 AGLTGPVKWLFGAIFGALYAPFVITGLHHMTNAIDTQLIADAGGTALWPMIALSNIAQGS
EF3030 AGLTGPVKWLFGAIFGALYAPFVITGLHHMTNAIDTQLIADAGGTALWPMIALSNIAQGS
**********************************************************.*
TIGR4 AVFAYYFMHRHDEREAQVSLPATISAYLGVTEPALFGVNVKYIYPFVAGMTGSALAGMLS
D39 AVFAYYFMHRHDEREAQVSLPATISAYLGVTEPALFGVNVKYIYPFVAGMTGSALAGMLS
D39V AVFAYYFMHRHDEREAQVSLPATISAYLGVTEPALFGVNVKYIYPFVAGMTGSALAGMLS
Hungary19A-6 AVFVYYFMHRHDEREAQVSLPATISAYLGVTEPALFGVNVKYIYPFVAGMTGSALAGMLS
EF3030 AVFAYYFMHRHDEREAQVSLPATISAYLGVTEPALFGVNVKYIYPFVAGMTGSALAGMLS
***.********************************************************
TIGR4 VTFNVTAASIGIGGLPGILSIQPQYMLPFAGTMLVAIVVPMLLTFFFRKAGLFTKTEGDT
D39 VIFNVTAASIGIGGLPGILSIQPQYMLPFAGTMLVAIVVPMLLTFFFRKAGLFTKTEGDT
D39V VIFNVTAASIGIGGLPGILSIQPQYMLPFAGTMLVAIVVPMLLTFFFRKAGLFTKTEGDT
Hungary19A-6 VTFNVTAASIGIGGLPGILSIQPQYMLPFAGTMLVAIVVPMLLTFFFRKAGLFTKTEGDT
EF3030 VTFNVTAASIGIGGLPGILSIQPQYMLPFAGTMLVAIVVPMLLTFFFRKAGLFTKTEGDT
* **********************************************************
TIGR4 NLQAEFVAQEEAEFVNHEPVELTSVEIISPLTGQVKELSQATDPIFASGVMGQGLVIEPS
D39 NLQAEFVAQEEAEFVSHELVELTSVEIISPLTGQVKELSQATDPVFASGVMGQGLVIEPS
D39V NLQAEFVAQEEAEFVSHELVELTSVEIISPLTGQVKELSQATDPVFASGVMGQGLVIEPS
Hungary19A-6 NLQAEFVAQEEAEFVNHEPVELTSVEIISPLTGQVKELSQATDPIFASGVMGQGLVIEPS
EF3030 NLQAEFVAQEEAEFVNHEPVELTSVEIISPLTGQVKELSQATDPIFASGVMGQGLVIEPS
***************.** *************************:***************
TIGR4 QGELTSPVNGTVTVLFPTKHAIGIVSDEGVELLIHIGMDTVGLDGKGFESLVVQGDHVTV
D39 QGELTSPVNGTVTVLFPTKHAIGIVSDEGVELLIHIGMDTVGLDGKGFESLVVQGDHVTV
D39V QGELTSPVNGTVTVLFPTKHAIGIVSDEGVELLIHIGMDTVGLDGKGFESLVVQGDHVTV
Hungary19A-6 QGELTSPVNGTVTVLFPTKHAIGIVSDEGVELLIHIGMDTVGLDGKGFESLVVQGDHVTV
EF3030 QGELTSPVNGTVAVLFPTKHAIGIVSDEGVELLIHIGMDTVGLDGKGFESLVVQGDHVTV
************:***********************************************
TIGR4 GQQLIRFDMDVIKAAGLVTETPVIITNQDAYTATIPGTYPTTIQAGASLMVATRI
D39 GQQLIRFDMDVIKAAGLVTETPVIITNQDAYTATITGTYPTTIQAGASLMVATRI
D39V GQQLIRFDMDVIKAAGLVTETPVIITNQDAYTATITGTYPTTIQAGASLMVATRI
Hungary19A-6 GQQLIRFDMDVIKAAGLVTETPVIITNQDAYTATIPGTYPTTIQAGASLMVATRI
EF3030 GQQLIRFDMDVIKAAGLVTETPVIITNQDAYTATIPGTYPTTIQAGASLMVATRI
***********************************.*******************