PangenomeTIGR4

serotype 4

D39

serotype 2

D39V

serotype 2

Hungary19A-6

serotype 19A

EF3030

serotype 19F

670-6B

serotype 6B

6A-10

serotype 6A

70585

serotype 5

A026

serotype 19F

A66

serotype 3

AP200

serotype 11A

ASP0581

serotype 12F

ATCC 49619

serotype 19F

ATCC 700669

serotype 23F

BM6001

serotype 19F

BVJ1JL

serotype 1

CGSP14

serotype 14

G54

serotype 19F

HU-OH

serotype 3

Hu15

serotype 19A

Hu17

serotype 19A

INV104

serotype 1

INV200

serotype 14

JJA

serotype 14

MDRSPN001

serotype 19F

NCTC7465

serotype 1

NCTC7466

serotype 2

NU83127

serotype 4

OXC141

serotype 3

P1031

serotype 1

R6

serotype 2

SP49

serotype 19A

SPN032672

serotype 1

SPN034156

serotype 3

SPN034183

serotype 3

SPN994038

serotype 3

SPN994039

serotype 3

SPNA45

serotype 3

ST556

serotype 19F

TCH8431/19A

serotype 19A

Taiwan19F-14

serotype 19F

Xen35

serotype 4

gamPNI0373

serotype 1

⊟Summary

• pan ID^?: PNEUPAN003379000
• symbol^?: czcD
• synonym:
• description^?: cation diffusion facilitator family transporter CzcD

  descriptions from strain specific annotations:

  • cation diffusion facilitator family transporter CzcD
  • cation efflux family protein
  • Cation diffusion facilitator transporter - heavy metal transport
  • cation efflux system protein
  • Cadmium, cobalt and zinc/H(+)-K(+) antiporter
  • cation transporter
  • Cobalt-zinc-cadmium resistance protein CzcD
  • cation diffusion facilitator family transporter
  • cation diffusion facilitator transporter family protein
  • Co/Zn/Cd efflux system component
• strand^?: -
• coordinates^?: 4432409..4433299
• occurrence^?: in 100% of 43 strains

⊟Orthologs

(4)^?
TIGR4:
SP_RS09215 (czcD)
(2)
D39:
SPD_RS08735 (czcD)
(2)
D39V:
SPV_RS08730 (czcD)
(19A)
Hungary19A-6:
SPH_RS09635 (czcD)
(19F)
EF3030:
EF3030_RS08910 (czcD)
(6B)^?
670-6B:
SP670_RS09620 (czcD)
(6A)
6A-10:
HKM25_RS09265 (czcD)
(5)
70585:
SP70585_RS09500 (czcD)
(19F)
A026:
T308_RS08605 (czcD)
(3)
A66:
A66_RS08255 (czcD)
(11A)
AP200:
SPAP_RS09195 (czcD)
(12F)
ASP0581:
EL334_RS09420 (czcD)
(19F)
ATCC 49619:
EL263_RS08995 (czcD)
(23F)
ATCC 700669:
SPN23F_RS09455 (czcD)
(19F)
BM6001:
ODS73_RS09610 (czcD)
(1)
BVJ1JL:
JN057_RS08950 (czcD)
(14)
CGSP14:
SPCG_RS09490 (czcD)
(19F)
G54:
SPG_RS08720 (czcD)
(1)
gamPNI0373:
HMPREF1038_RS08955 (czcD)
(3)
HU-OH:
EL271_RS09005 (czcD)
(19A)
Hu15:
SPNHU15_RS08870 (czcD)
(19A)
Hu17:
SPNHU17_RS08855 (czcD)
(1)
INV104:
INV104_RS09175 (czcD)
(14)
INV200:
SPNINV200_RS08910 (czcD)
(14)
JJA:
SPJ_RS08765 (czcD)
(19F)
MDRSPN001:
MDRSPN_RS08405 (czcD)
(1)
NCTC7465:
AT689_RS04805 (czcD)
(2)
NCTC7466:
DQM66_RS08730 (czcD)
(4)
NU83127:
EL277_RS09410 (czcD)
(3)
OXC141:
SPNOXC_RS08840 (czcD)
(1)
P1031:
SPP_RS09175 (czcD)
(2)
R6:
SPR_RS08320 (czcD)
(19A)
SP49:
BMJ42_RS09845 (czcD)
(1)
SPN032672:
SPN032672_RS04060 (czcD)
(3)
SPN034156:
SPN034156_RS03810 (czcD)
(3)
SPN034183:
SPN034183_RS08860 (czcD)
(3)
SPN994038:
SPN994038_RS08765 (czcD)
(3)
SPN994039:
SPN994039_RS08770 (czcD)
(3)
SPNA45:
SPNA45_RS02345 (czcD)
(19F)
ST556:
MYY_RS09045 (czcD)
(19F)
Taiwan19F-14:
SPT_RS08840 (czcD)
(19A)
TCH8431/19A:
HMPREF0837_RS09980 (czcD)
(4)
Xen35:
CXP32_RS09305 (czcD)

⊟Genome Viewer

TIGR4
D39
D39V
Hungary19A-6
EF3030

⊟Alignments

• alignment of orthologues:
  CLUSTAL format alignment by MAFFT L-INS-i (v7.505)
  
  
  TIGR4           MKAKYAVWVAFFLNLTYAIVEFIAGGVFGSSAVLADSVHDLGDAIAIGISAFLETISNRE
  D39             MKAKYAVWVAFFLNLTYAIVEFIAGGVFGSSAVLADSVHDLGDAIAIGISAFLETISNRE
  D39V            MKAKYAVWVAFFLNLTYAIVEFIAGGVFGSSAVLADSVHDLGDAIAIGISAFLETISNRE
  Hungary19A-6    MKAKYAVWVAFFLNLTYAIVEFIAGGIFGSSAVLADSVHDLVDAIAIGISAFLETISNRE
  EF3030          MKAKYAVWVAFFLNLTYAIVEFIAGGVFGSSAVLADSVHDLGDAIAIGISAFLELISNRE
                  **************************:************** ************ *****
  
  TIGR4           EDNQYTLGYKRFSLLGALVTAVILVTGSVLVILENVTKILHPQPVNDEGILWLGIIAITI
  D39             EDNQYTLGYKRFSLLGALVTAVILVTGSVLVILENVTKILHPQPVNDEGILWLGIIAITI
  D39V            EDNQYTLGYKRFSLLGALVTAVILVTGSVLVILENVTKILHPQPVNDEGILWLGIIAITI
  Hungary19A-6    EDNQYTLGYKRFSLLGALVTAVILVTGSVLVILENVTKILHPQPVNDEGILWLGIIAITI
  EF3030          EDNQYTLGYKRFSLLGALVTAVILVTGSVLVILENVTKILHPQPVNDEGILWLGIIAITI
                  ************************************************************
  
  TIGR4           NLLASLVVGKGKTKNESILSLHFLEDTLGWVAVILMAIVLRFTDWYILDPLLSLVISFFI
  D39             NLLASLVVGKGKTKNESILSLHFLEDTLGWVAVILMAIVLRFTDWYILDPLLSLVISFFI
  D39V            NLLASLVVGKGKTKNESILSLHFLEDTLGWVAVILMAIVLRFTDWYILDPLLSLVISFFI
  Hungary19A-6    NLLASLVVGKGKTKNESILSLHFLEDTLGWVAVILMAIVLRFTDWYILDPLLSLVISFFI
  EF3030          NLLASLVVGKGKTKNESILSLHFLEDTLGWVAVILMAIVLRFTDWYILDPLLSLVISFFI
                  ************************************************************
  
  TIGR4           LSKALPRFWSTLKIFLDAVPEGLDIKQVKSGLERLDNVASLNQLNLWTMDALEKNAIVHV
  D39             LSKALPRFWSTLKIFLDAVPEGLDIKQVKSGLERLDNVASLNQLNLWTMDALEKNAIVHV
  D39V            LSKALPRFWSTLKIFLDAVPEGLDIKQVKSGLERLDNVASLNQLNLWTMDALEKNAIVHV
  Hungary19A-6    LSKALPRFWSTLKIFLDAVPEGLDIKQVKSGLERLDNVVSLNQLNLWTMDALEKNAIVHV
  EF3030          LSKALPRFWSTLKIFLDAVPEGLDIKQVKSGLERLDNVVSLNQLNLWTMDALEKNAIVHV
                  **************************************.*********************
  
  TIGR4           CLKEMEHMETCKESIRIFLKDCGFQNITIEIDADLETHQTHKRKVCDLERSYEHQH
  D39             CLKEMEHMETCKESIRIFLKDCGFQNITIEIDADLETHQTHKRKVCDLERSYEHQH
  D39V            CLKEMEHMETCKESIRIFLKDCGFQNITIEIDADLETHQTHKRKVCDLERSYEHQH
  Hungary19A-6    CLKEMEHMETCKESIRIFLKDCGFQNITIEIDADLETHQTHKRKVCDLERSYEHQH
  EF3030          CLKEMEHMETCKESIRIFLKDCGFQNITIEIDADLETHQTHKRKVCDLERSYEHQH
                  ********************************************************