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PangenomeTIGR4
serotype 4
D39serotype 2
D39Vserotype 2
Hungary19A-6serotype 19A
EF3030serotype 19F
670-6Bserotype 6B
6A-10serotype 6A
70585serotype 5
A026serotype 19F
A66serotype 3
AP200serotype 11A
ASP0581serotype 12F
ATCC 49619serotype 19F
ATCC 700669serotype 23F
BVJ1JLserotype 1
CGSP14serotype 14
G54serotype 19F
HU-OHserotype 3
Hu15serotype 19A
Hu17serotype 19A
INV104serotype 1
INV200serotype 14
JJAserotype 14
MDRSPN001serotype 19F
NCTC7466serotype 2
NU83127serotype 4
OXC141serotype 3
P1031serotype 1
R6serotype 2
SP49serotype 19A
SPN032672serotype 1
SPN034156serotype 3
SPN034183serotype 3
SPN994038serotype 3
SPN994039serotype 3
SPNA45serotype 3
ST556serotype 19F
TCH8431/19Aserotype 19A
Taiwan19F-14serotype 19F
Xen35serotype 4
gamPNI0373serotype 1
⊟Summary[edit | edit source]
- pan ID?: PNEUPAN003501000
- symbol?: pheT_2
- synonym:
- description?: DUF4479 and tRNA-binding domain-containing protein
- DUF4479 and tRNA-binding domain-containing protein
- putative tRNA-binding protein
- Putative tRNA binding domain protein
- conserved hypothetical protein
- tRNA-binding protein
- Phenylalanine--tRNA ligase beta subunit
- tRNA binding domain protein
- DUF4479 domain-containing protein
- phenylalanyl-tRNA synthetase, beta subunit
- EMAP domain protein
- Phenylalanyl-tRNA synthetase domain protein
- Phenylalanyl-tRNA synthetase domain protein (Bsu YtpR)
descriptions from strain specific annotations:
- strand?: +
- coordinates?: 4491145..4491777
- occurrence?: in 100% of 41 strains
⊟Orthologs[edit | edit source]
⊟Genome Viewer[edit | edit source]
| TIGR4 | |
| D39 | |
| D39V | |
| Hungary19A-6 | |
| EF3030 |
⊟Alignments[edit | edit source]
- alignment of orthologues: CLUSTAL format alignment by MAFFT L-INS-i (v7.505)
TIGR4 MIFTYNKEHVGDVLMVIVKNSGDAKLDVERKGKVARVFL-KDNGETVAWNIFEVSSLFEI
D39 MIFTYNKEHVGDVLMVIVKNSGDAKLNVERKGKVARVFL-KENGETVAWNIFEVSSLFEI
D39V MIFTYNKEHVGDVLMVIVKNSGDAKLNVERKGKVARVFL-KENGETVAWNIFEVSSLFEI
Hungary19A-6 MIFTYNKEHVGDVLMVIVKNSGDAKLNVERKGKVARVFLKKENGETVAWNIFEVSSLFEI
EF3030 MIFTYNKEHVGDVLMVIVKNSGDAKLNVERKGKVARVFL-KENGETVAWNIFEVSSLFEI
**************************:************ *:******************
TIGR4 AERGQVFLTDEQVARLNQELQAEGFTEEIVNDKEPKFVVGEIVEMVAHPDSDHLNICQVA
D39 AERGQVFLSDEQVARLNQELQAEGFTEEIVNDKEPKFVVGEIVEMVAHPDSDHLNICQVA
D39V AERGQVFLSDEQVARLNQELQAEGFTEEIVNDKEPKFVVGEIVEMVAHPDSDHLNICQVA
Hungary19A-6 AERGQVFLSDEQVARLNQELQAEGFTEEIVNDKEPKFVVGEIVEMVAHPDSDHLNICQVA
EF3030 AERGQVFLSDEQVARLNQELQAEGFTEEIVNDKEPKFVVGEIVEMVAHPDSDHLNICQVA
********:***************************************************
TIGR4 VASDKTVQIVAGAPNARVGLKTIVALPGAMMPKGNLIFPGELRGEKSFGMMCSPRELHLP
D39 VASDKIVQIVAGAPNARVGLKTIVALPGAMMPKGNFIFPGELRGEKSFGMMCSPRELHLP
D39V VASDKIVQIVAGAPNARVGLKTIVALPGAMMPKGNFIFPGELRGEKSFGMMCSPRELHLP
Hungary19A-6 VASDKIVQIVAGAPNARVGLKTIVALPGAMMPKGNFIFPGELRGEKSFGMMCSPRELHLP
EF3030 VASDKIVQIVAGAPNARVGLKTIVALPGAMMPKGNFIFPGELRGEKSFGMMCSPRELHLP
***** *****************************:************************
TIGR4 NAPQKRGVLELSEDQVVGTPFDPAKHWTA
D39 NAPQKRGVLELSEDQVVGTPFDPAKHWTA
D39V NAPQKRGVLELSEDQVVGTPFDPAKHWTA
Hungary19A-6 NAPQKRGVLELSEDQVVGTPFDPAKHWTA
EF3030 NAPQKRGVLELSEDQVVGTPFDPAKHWTA
*****************************