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PangenomeTIGR4
serotype 4
D39serotype 2
D39Vserotype 2
Hungary19A-6serotype 19A
EF3030serotype 19F
670-6Bserotype 6B
6A-10serotype 6A
70585serotype 5
A026serotype 19F
A66serotype 3
AP200serotype 11A
ASP0581serotype 12F
ATCC 49619serotype 19F
ATCC 700669serotype 23F
BVJ1JLserotype 1
CGSP14serotype 14
G54serotype 19F
HU-OHserotype 3
Hu15serotype 19A
Hu17serotype 19A
INV104serotype 1
INV200serotype 14
JJAserotype 14
MDRSPN001serotype 19F
NCTC7466serotype 2
NU83127serotype 4
OXC141serotype 3
P1031serotype 1
R6serotype 2
SP49serotype 19A
SPN032672serotype 1
SPN034156serotype 3
SPN034183serotype 3
SPN994038serotype 3
SPN994039serotype 3
SPNA45serotype 3
ST556serotype 19F
TCH8431/19Aserotype 19A
Taiwan19F-14serotype 19F
Xen35serotype 4
gamPNI0373serotype 1
⊟Summary[edit | edit source]
- pan ID?: PNEUPAN003502000
- symbol?: ydfG
- synonym:
- description?: SDR family NAD(P)-dependent oxidoreductase
- SDR family NAD(P)-dependent oxidoreductase
- SDR family oxidoreductase
- oxidoreductase, short chain dehydrogenase/reductase family
- putative NADP-dependent L-serine/L-allo-threonine dehydrogenase
- NADP-dependent 3-hydroxy acid dehydrogenase
- Oxidoreductase
- oxidoreductase, short chain dehydrogenase/reductase family protein
- 3-oxoacyl-ACP reductase
- L-allo-threonine dehydrogenase
- Short-chain dehydrogenase
- KR domain protein
- NAD(P)-dependent oxidoreductase
- NADP-dependent 3-hydroxy acid dehydrogenase YdfG
- NADP-dependent L-serine/L-allo-threonine dehydrogenase YdfG
- Short-chain alcohol dehydrogenase of unknown specificity
descriptions from strain specific annotations:
- strand?: +
- coordinates?: 4491819..4492580
- occurrence?: in 100% of 41 strains
⊟Orthologs[edit | edit source]
⊟Genome Viewer[edit | edit source]
| TIGR4 | |
| D39 | |
| D39V | |
| Hungary19A-6 | |
| EF3030 |
⊟Alignments[edit | edit source]
- alignment of orthologues: CLUSTAL format alignment by MAFFT L-INS-i (v7.505)
TIGR4 MAKNVVITGATSGIGEAIARAYLEQGEDVVLTGRRIDRLEALKAEFAETFPNQTVWTFLL
D39 MAKNVVITGATSGIGEAIARAYLEQGEDVVLTGRRIDRLEILKSEFAVSFPNQTVWTFPL
D39V MAKNVVITGATSGIGEAIARAYLEQGEDVVLTGRRIDRLEILKSEFAVSFPNQTVWTFPL
Hungary19A-6 MAKNVVITGATSGIGEAIARAYLEQGEDVVLTGRRIDRLEILKSEFAVSFPNQTVWTFPL
EF3030 MAKNVVITGATSGIGEAIARAYLEQGEDVVLTGRRIDRLEILKSEFAVSFPNQTVWTFPL
**************************************** **:*** :********* *
TIGR4 DVTDMTMVKTVCSDILETIGQIDILVNNAGLALGLAPYQDYEELDMLTMLDTNVKGLMAV
D39 DVTDMVMVKTVCSDILETIGRIDILVNNAGLALDLAPYQDYEELDMLTMLDTNVKGLMAV
D39V DVTDMVMVKTVCSDILETIGRIDILVNNAGLALDLAPYQDYEELDMLTMLDTNVKGLMAV
Hungary19A-6 DVTDMVMVKTVCSDILETIGRIDILVNNAGLALDLAPYQDYEELDMLTMLDTNVKGLMAV
EF3030 DVTDMVMVKTVCSDILETIGRIDILVNNAGLALDLAPYQDYEELDMLTMLDTNVKGLMAV
*****.**************:************.**************************
TIGR4 TRCFLPAMVKANQGHIINMGSTAGIYAYAGAAVYSATKAAVKTFSDGLRIDTIATDIKVT
D39 THCFLPAMIKVNQGHIINMGSTAGIYAYAGAAVYSATKAAVKTFSDGLRIDTIATDIKVT
D39V THCFLPAMIKVNQGHIINMGSTAGIYAYAGAAVYSATKAAVKTFSDGLRIDTIATDIKVT
Hungary19A-6 TRCFLPAMIKVNQGHIINMGSTAGIYAYAGAAVYSATKAAVKTFSDGLRIDTIATDIKVT
EF3030 THCFLPAMIKVNQGHIINMGSTAGIYAYAGAAVYSATKAAVKTFSDGLRIDTIATDIKVT
*:******:*.*************************************************
TIGR4 TIQPGIVETDFSTVRFHGDKERAASVYQGIEALQAQDIADTVVYVTSQPRRVQITDMTIM
D39 TIQPGIVETDFSTVRFHGDKERAASVYQGIEALQAQDIADTVVYVTSQPRRVQITDMTIM
D39V TIQPGIVETDFSTVRFHGDKERAASVYQGIEALQAQDIADTVVYVTSQPRRVQITDMTIM
Hungary19A-6 TIQPGIVETDFSTVRFHGDKERAASVYQGIEALQAQDIADTVVYVTSQPRRVQITDMTIM
EF3030 TIQPGIVETDFSTVRFHGDKERAASVYQGIEALQAQDIADTVVYVTSQPRRVQITDMTIM
************************************************************
TIGR4 ANQQATGFMVHKK
D39 ANQQATGFMIHKK
D39V ANQQATGFMIHKK
Hungary19A-6 ANQQATGFMIHKK
EF3030 ANQQATGFMIHKK
*********:***