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PangenomeTIGR4
serotype 4
D39serotype 2
D39Vserotype 2
Hungary19A-6serotype 19A
EF3030serotype 19F
670-6Bserotype 6B
6A-10serotype 6A
70585serotype 5
A026serotype 19F
A66serotype 3
AP200serotype 11A
ASP0581serotype 12F
ATCC 49619serotype 19F
ATCC 700669serotype 23F
BVJ1JLserotype 1
CGSP14serotype 14
G54serotype 19F
HU-OHserotype 3
Hu15serotype 19A
Hu17serotype 19A
INV104serotype 1
INV200serotype 14
JJAserotype 14
MDRSPN001serotype 19F
NCTC7466serotype 2
NU83127serotype 4
OXC141serotype 3
P1031serotype 1
R6serotype 2
SP49serotype 19A
SPN032672serotype 1
SPN034156serotype 3
SPN034183serotype 3
SPN994038serotype 3
SPN994039serotype 3
SPNA45serotype 3
ST556serotype 19F
TCH8431/19Aserotype 19A
Taiwan19F-14serotype 19F
Xen35serotype 4
gamPNI0373serotype 1
⊟Summary[edit | edit source]
- pan ID?: PNEUPAN003517000
- symbol?: tsaE
- synonym:
- description?: tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex ATPase subunit type 1 TsaE
- tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex ATPase subunit type 1 TsaE
- putative P-loop hydrolase
- Conserved hypothetical protein
- tRNA threonylcarbamoyladenosine biosynthesis
- hydrolase
- putative ATPase
- TsaE protein, required for threonylcarbamoyladenosine t(6)A37 formation in tRNA
- conserved hypothetical protein TIGR00150
- hydrolase, P-loop family
- Predicted ATPase or kinase
- putative ATP-binding protein
- tRNA threonylcarbamoyladenosine biosynthesis protein TsaE
descriptions from strain specific annotations:
- strand?: +
- coordinates?: 4524949..4525392
- occurrence?: in 100% of 41 strains
⊟Orthologs[edit | edit source]
SPN034156:
SPN034156_RS04385 (tsaE)
SPN034183:
SPN034183_RS09410 (tsaE)
SPN994038:
SPN994038_RS09315 (tsaE)
⊟Genome Viewer[edit | edit source]
| TIGR4 | |
| D39 | |
| D39V | |
| Hungary19A-6 | |
| EF3030 |
⊟Alignments[edit | edit source]
- alignment of orthologues: CLUSTAL format alignment by MAFFT L-INS-i (v7.505)
TIGR4 MYTKNEEELQALGERLGHLLAKNDVLILTGELGAGKTTFTKGLAKGLQISQMIKSPTYTI
D39 MYTKNEEELQALGERLGHLLAKNDVLILTGELGAGKTTFTKGLAKGLQISQMIKSPTYTI
D39V MYTKNEEELQALGERLGHLLAKNDVLILTGELGAGKTTFTKGLAKGLQISQMIKSPTYTI
Hungary19A-6 MYTKNEEELQALGERLGHLLAKNDVLILIGELGAGKTTFTKGLAKGLQISQMIKSPTYTI
EF3030 MYTKNEEELQALGERLGHLLAKNDVLILTGELGAGKTTFTKGLAKGLQISQMIKSPTYTI
**************************** *******************************
TIGR4 VREYEGRLPLYHLDVYRIEGDADSIDLDEFIFGGGVTVIEWGNLLGDALPDAYLELEILK
D39 VREYEGRLPLYHLDVYRIEGDADSIDLDEFIFGGGVTVIEWGNLLGDALPDAYLELEILK
D39V VREYEGRLPLYHLDVYRIEGDADSIDLDEFIFGGGVTVIEWGNLLGDALPDAYLELEILK
Hungary19A-6 VREYEGRLPLYHLDVYRIEGDADSIDLDEFIFGGGVTVIEWGNLLGDALPDAYLELEILK
EF3030 VREYEGRLPLYHLDVYRIEGDADSIDLDEFIFGGGVTVIEWGNLLGDALPDAYLELEILK
************************************************************
TIGR4 EADGRRLNFQAKGLRAEKLLEELQYGV
D39 EADGRRLNFQAKGLRAEKLLEELQYGV
D39V EADGRRLNFQAKGLRAEKLLEELQYGV
Hungary19A-6 EADGRRLNFQAKGLRAEKLLEELQYGV
EF3030 EADGRRLNFQAKGLRAEKLLEELQYGV
***************************