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PangenomeTIGR4
serotype 4
D39serotype 2
D39Vserotype 2
Hungary19A-6serotype 19A
EF3030serotype 19F
670-6Bserotype 6B
6A-10serotype 6A
70585serotype 5
A026serotype 19F
A66serotype 3
AP200serotype 11A
ASP0581serotype 12F
ATCC 49619serotype 19F
ATCC 700669serotype 23F
BVJ1JLserotype 1
CGSP14serotype 14
G54serotype 19F
HU-OHserotype 3
Hu15serotype 19A
Hu17serotype 19A
INV104serotype 1
INV200serotype 14
JJAserotype 14
MDRSPN001serotype 19F
NCTC7466serotype 2
NU83127serotype 4
OXC141serotype 3
P1031serotype 1
R6serotype 2
SP49serotype 19A
SPN032672serotype 1
SPN034156serotype 3
SPN034183serotype 3
SPN994038serotype 3
SPN994039serotype 3
SPNA45serotype 3
ST556serotype 19F
TCH8431/19Aserotype 19A
Taiwan19F-14serotype 19F
Xen35serotype 4
gamPNI0373serotype 1
⊟Summary[edit | edit source]
- pan ID?: PNEUPAN003541000
- symbol?: —
- synonym:
- description?: ABC transporter permease
- ABC transporter permease
- ABC-type multidrug transport system, permease component
- ABC-2 type transporter membrane protein
- multidrug ABC transporter permease
- conserved hypothetical protein
- ABC transporter permease protein
- ABC-2 transporter family protein
- ABC-2 type transporter
- ABC superfamily ATP binding cassette transporter, permease protein
- ABC transporter, permease protein
- membrane protein, putative
descriptions from strain specific annotations:
- strand?: +
- coordinates?: 4549014..4549751
- occurrence?: in 100% of 41 strains
⊟Orthologs[edit | edit source]
⊟Genome Viewer[edit | edit source]
| TIGR4 | |
| D39 | |
| D39V | |
| Hungary19A-6 | |
| EF3030 |
⊟Alignments[edit | edit source]
- alignment of orthologues: CLUSTAL format alignment by MAFFT L-INS-i (v7.505)
TIGR4 MKRWLALSKIEFLLTKRQLIYYLLSVGMPTAFYLFFSGIYQDTPGELANFMRDYLISMTA
D39 MKRWIALSKIEFLLTKRQLIYYLLSVGMPTAFYLFFSGIYQDTPGELANFMRDYLISMTA
D39V MKRWIALSKIEFLLTKRQLIYYLLSVGMPTAFYLFFSGIYQDTPGELANFMRDYLISMTA
Hungary19A-6 MKRWIALSKIEFLLTKRQLIYYLLSVGMPTAFYLFFSGIYQDTPGELANFMRDYLISMTA
EF3030 MKRWIALSKIEFLLTKRQLIYYLLSVGMPTAFYLFFSGIYQDTPGELANFMRDYLISMTA
****:*******************************************************
TIGR4 FSMMSTAIFSFPVVLHTDKINNWQKTLRHSPVNMVEYYLSKITSMLVDYLVSILVVFSVG
D39 FSMMSTAIFSFPVVLHTDKINNWQKTLRHSPVNMVEYYLSKITSMLVDYLVSILVVFSVG
D39V FSMMSTAIFSFPVVLHTDKINNWQKTLRHSPVNMVEYYLSKITSMLVDYLVSILVVFSVG
Hungary19A-6 FSMMSTTILSFPAVLHTDKMNNWQKTLRHSPVNMVEYYLSKITSMLVDYLVSILVVFTVG
EF3030 FSMMSTTILSFPAVLHTDKMNNWQKTLRHSPVNMVEYYLSKITSMLVDYLVSILVVFTVG
******:*:***.******:*************************************:**
TIGR4 HFVRGVDMSLGNWIGAALLLIVGSIAFVALGLTLTLLPTSQLMSVVGNLLYLGLAVLGGL
D39 HFVRGVDMSLGNWIGAALLLIVGSIAFVALGLTLTLLPTSQLMSVVGNLLYLGLAVLGGL
D39V HFVRGVDMSLGNWIGAALLLIVGSIAFVALGLTLTLLPTSQLMSVVGNLLYLGLAVLGGL
Hungary19A-6 HFVRGVDMSLGNWIGAAFLLIVGSVAFVALGLTLTLLPSSQLMSVVGNLLYLGLAVLGGL
EF3030 HFVRGVDMPLVKWVGAAILLIVGSIAFVALGLTLTLLPTSQLMSVVGNLLYLGLAVLGGL
********.* :*:***:******:*************:*********************
TIGR4 WMPISLFPDWMQVVGKCLPTYQLMELLKTFLNEGGINLSATVYLLVFSVVLFGLTIYLQG
D39 WMPISLFPDWMQVVGKCLPTYQLMELLKTFLNEGGINLSATVYLLVFSVVLFGLTIYLQG
D39V WMPISLFPDWMQVVGKCLPTYQLMELLKTFLNEGGINLSATVYLLVFSVVLFGLTIYLQG
Hungary19A-6 WMPISLFPDWMQVVGKCLPTYQLMELLKTFLNEGGINLSATVYLLVFSAVLFGLTIYLQG
EF3030 WMPISLFPDWMQAVGKCLPTYQLMELLKTFLNEGGINLSATVYLLVFSAVLFGLTIYLQG
************.***********************************.***********
TIGR4 HKENA
D39 HKENA
D39V HKENA
Hungary19A-6 HKENA
EF3030 HKENA
*****