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PangenomeTIGR4
serotype 4
D39serotype 2
D39Vserotype 2
Hungary19A-6serotype 19A
EF3030serotype 19F
670-6Bserotype 6B
6A-10serotype 6A
70585serotype 5
A026serotype 19F
A66serotype 3
AP200serotype 11A
ASP0581serotype 12F
ATCC 49619serotype 19F
ATCC 700669serotype 23F
BVJ1JLserotype 1
CGSP14serotype 14
G54serotype 19F
HU-OHserotype 3
Hu15serotype 19A
Hu17serotype 19A
INV104serotype 1
INV200serotype 14
JJAserotype 14
MDRSPN001serotype 19F
NCTC7466serotype 2
NU83127serotype 4
OXC141serotype 3
P1031serotype 1
R6serotype 2
SP49serotype 19A
SPN032672serotype 1
SPN034156serotype 3
SPN034183serotype 3
SPN994038serotype 3
SPN994039serotype 3
SPNA45serotype 3
ST556serotype 19F
TCH8431/19Aserotype 19A
Taiwan19F-14serotype 19F
Xen35serotype 4
gamPNI0373serotype 1
⊟Summary[edit | edit source]
- pan ID?: PNEUPAN003542000
- symbol?: hk11
- synonym:
- description?: sensor histidine kinase
- sensor histidine kinase
- Histidine kinase
- histidine sensor kinase protein
- Sensor histidine kinase DesK
- sensor histidine kinase, putative
- histidine kinase family protein
- histidine kinase TCS11
- putative sensor histidine kinase
- Signal transduction histidine kinase
- two-component signal (TCS11) sensor histidine kinase
- Two-component system sensor histidine kinase
descriptions from strain specific annotations:
- strand?: +
- coordinates?: 4549751..4550848
- occurrence?: in 100% of 41 strains
⊟Orthologs[edit | edit source]
⊟Genome Viewer[edit | edit source]
| TIGR4 | |
| D39 | |
| D39V | |
| Hungary19A-6 | |
| EF3030 |
⊟Alignments[edit | edit source]
- alignment of orthologues: CLUSTAL format alignment by MAFFT L-INS-i (v7.505)
TIGR4 MLERLKRIHYMFWISLIFMIFPILSVVTGWLSAWHLLIDILFVVAYLGVLTTKSQRLSWL
D39 MLERLKSIHYMFWISLIFMVFPILTVVTGWLSAWHLLIDILFVVAYLGVLTTKSQRLSWL
D39V MLERLKSIHYMFWISLIFMVFPILTVVTGWLSAWHLLIDILFVVAYLGVLTTKSQRLSWL
Hungary19A-6 MLERLKSIDYMYWTSLIFMVFPIVPVVTGELPSWHLLIDILFVLAYLGVLTTKSQRLSWL
EF3030 MLERLKSIHYMFWASLIFMLFPILPVVIGELPAWHLLVDILFVVTYLGVLITKSQRLSWL
****** *.**:* *****:***:.** * *.:****:*****::***** *********
TIGR4 YWGLMLTYVVGNTAFVAVNYIWFFFFLSNLLSYHFSVRSLKSLHVWTFLLAQVLVVGQLL
D39 YWGILLTYVVGNTAFVAVNYIWFFFFLSNLLSYHFSVGGLKSLHVWTFLLAQVLVVGQLL
D39V YWGILLTYVVGNTAFVAVNYIWFFFFLSNLLSYHFSVGGLKSLHVWTFLLAQVLVVGQLL
Hungary19A-6 CWVIMLAYVAGNTAFVGVNYIWFFFFLANLLIYHFGVRSFNSLHVRTFLLAQFLVVGQLL
EF3030 FWGLMLVYVAGNTAFVAGNYIWFFFFLSNLLIYHFGVGGLKSLHVWTFLLAQVLVVGQLL
* ::*.**.******. *********:*** ***.* .::**** ******.*******
TIGR4 IFQRIEVEFLFYLLVILTFVDLMTFGLVRIRIVEDLKEAQVKQNAQINLLLAENERSRIG
D39 IFQRIEVEFLFYLLVILAFVDLMTFGLVRIRIVEDLKEAQAKQNAQINLLLAENERNRIG
D39V IFQRIEVEFLFYLLVILAFVDLMTFGLVRIRIVEDLKEAQAKQNAQINLLLAENERNRIG
Hungary19A-6 IFQEVEVEFLVYLLGIITFIDLMTFGLVRIRIVEDLKEAQAKQNAQINLLLAENERSRIG
EF3030 IFQRIEVEFLFYLLVILAFVDLMTFGLVRIRIVEDLKEAQAKQNAQINLLLAENERSRIG
***.:*****.*** *::*:********************.***************.***
TIGR4 QDLHDSLGHTFAMLSVKTDLALQLFQMEAYPQVEKELKEIHQISKDSMNEVRTIVENLKS
D39 QDLHDSLGHTFAMLSVKTDLALQLFQMEAYPQVEKELKEIHQISKDSMNEVRTIVENLKS
D39V QDLHDSLGHTFAMLSVKTDLALQLFQMEAYPQVEKELKEIHQISKDSMNEVRTIVENLKS
Hungary19A-6 QDLHDSLGHTFAMLSVKTDLALQLFQIQAYPQVEKELREIQQISKESMREVRTIVENLKS
EF3030 QDLHDSLGHTFAMLSVKTDLALQLFQMEAYPQVEKELKEIHQISKDSMNEVRTIVENLKS
**************************::*********:**:****:**.***********
TIGR4 RTLTSELETVKKMLEIAGIEVQVENHLDKSSLTQELESTASMILLELVTNIIKHAKASKV
D39 RTLTSELETVKKMLEIAGIEVETDNQLDTASLTQELESMASMILLELVTNIIKHAKASKA
D39V RTLTSELETVKKMLEIAGIEVETDNQLDTASLTQELESMASMILLELVTNIIKHAKASKA
Hungary19A-6 RTLTSELETVKKMLEIAGIEVETDNQLDTASLTQKLESTASMILLELVTNIIKHAQASKV
EF3030 RTLTSELETVKKMLEIAGIEVETDNQLDTASLTQELESMASMILLELVTNIIKHAKASKA
*********************:.:*:**.:****:*** ****************:***.
TIGR4 YLKLERTEKELILTVRDDGCGFASISGDELHTVRNRVFPFSGEVSVISQKHPTEVQVRLL
D39 YLKLERTEKELILTVSDDGCGFAFLKGDELHTVRDRVFPFSGEVSVISQKHPTEVQVRLP
D39V YLKLERTEKELILTVSDDGCGFAFLKGDELHTVRDRVFPFSGEVSVISQKHPTEVQVRLP
Hungary19A-6 YLKLERTEKELILAVSDDGCGFAFLKGDELHTIRDRVFPFSGEVSVISQKHPTEVQVRLP
EF3030 YLKLERTEKELILTVSDDGCGFAFLKGDELHTVRDRVFPFSGEVSVISQKHPTEVQVRLP
*************:* ******* :.******:*:************************
TIGR4 YKERK
D39 YKERN
D39V YKERN
Hungary19A-6 YKERN
EF3030 YKERK
****: