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PangenomeTIGR4
serotype 4
D39serotype 2
D39Vserotype 2
Hungary19A-6serotype 19A
EF3030serotype 19F
670-6Bserotype 6B
6A-10serotype 6A
70585serotype 5
A026serotype 19F
A66serotype 3
AP200serotype 11A
ASP0581serotype 12F
ATCC 49619serotype 19F
ATCC 700669serotype 23F
BVJ1JLserotype 1
CGSP14serotype 14
G54serotype 19F
HU-OHserotype 3
Hu15serotype 19A
Hu17serotype 19A
INV104serotype 1
INV200serotype 14
JJAserotype 14
MDRSPN001serotype 19F
NCTC7466serotype 2
NU83127serotype 4
OXC141serotype 3
P1031serotype 1
R6serotype 2
SP49serotype 19A
SPN032672serotype 1
SPN034156serotype 3
SPN034183serotype 3
SPN994038serotype 3
SPN994039serotype 3
SPNA45serotype 3
ST556serotype 19F
TCH8431/19Aserotype 19A
Taiwan19F-14serotype 19F
Xen35serotype 4
gamPNI0373serotype 1
⊟Summary[edit | edit source]
- pan ID?: PNEUPAN003543000
- symbol?: rr11
- synonym:
- description?: response regulator transcription factor
- response regulator transcription factor
- Response regulator
- response regulator protein
- DNA-binding response regulator
- Transcriptional regulatory protein DesR
- transcriptional regulator
- Two-component response regulator
- Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain
- response regulator receiver domain protein
- response regulator TCS11
- two-component signal (TCS11) DNA-binding response regulator
- Two-component system response regulator
descriptions from strain specific annotations:
- strand?: +
- coordinates?: 4550850..4551449
- occurrence?: in 100% of 41 strains
⊟Orthologs[edit | edit source]
⊟Genome Viewer[edit | edit source]
| TIGR4 | |
| D39 | |
| D39V | |
| Hungary19A-6 | |
| EF3030 |
⊟Alignments[edit | edit source]
- alignment of orthologues: CLUSTAL format alignment by MAFFT L-INS-i (v7.505)
TIGR4 MKVLVAEDQSMLRDAMCQLLMLQPDVESVFQAKNGQEAIQLLEKESVDIAILDVEMPVKT
D39 MKVLVAEDQSMLRDAMCQLLTLQPDVESVLQAKNGQEAIQLLEKESVDIAILDVEMPVKT
D39V MKVLVAEDQSMLRDAMCQLLTLQPDVESVLQAKNGQEAIQLLEKESVDIAILDVEMPVKT
Hungary19A-6 MKVLVAEDQNMLRDAMCQLLTLQPDVESVLQAKNGQEAIQLLEKESVDIAILDVEMPVKT
EF3030 MKVLVAEDQSMLRDAMCQLLTLQPDVESVLQAKNGQEAIQLLEKESVDIAILDVEMPVKT
*********.********** ********:******************************
TIGR4 GLEVLEWIRAEKLETKVVVVTTFKRPGYFERAVKAGVDAYVLKERNIADLMQTLHTVLEG
D39 GLEVLEWIRSEKLETKVVVVTTFKRAGYFERAVKAGVDAYVLKERSIADLMQTLHTVLEG
D39V GLEVLEWIRSEKLETKVVVVTTFKRAGYFERAVKAGVDAYVLKERSIADLMQTLHTVLEG
Hungary19A-6 GLEVLEWIRSERLETKVVVVTTFKRAGYFERAVKAGVDAYVLKERSVADLMQTLHTVLEG
EF3030 GLEVLEWIRSEKLETKVVVVTTFKRAGYFERAVKAGVDAYVLKERSIADLMQTLHTVLEG
*********:*:*************.*******************.:*************
TIGR4 RKEYSPELMEVVMMHPNPLTEQEIAVLKGIAQGFSNQEIADKLYLSNGTVRNYVTNILSK
D39 RKEYSPELMEMVMTRPNPLTEQEIAVLKGIARGLSNQEIADQLYLSNGTIRNYVTNILSK
D39V RKEYSPELMEMVMTRPNPLTEQEIAVLKGIARGLSNQEIADQLYLSNGTIRNYVTNILSK
Hungary19A-6 RKEYSPELMEVVMTRPNPLTEQEIAVLKGIARGLSNQEIADQLYLSNGTIRNYVTNILSK
EF3030 RKEYSPELMEVVMTRPNPLTEQEIAVLKGIARGLSNQEIADQLYLSNGTIRNYVTNILSK
**********:** :****************:*:*******:*******:**********
TIGR4 LDAGNRTEAANIAKESGWL
D39 LDAGNRTEAANIAKESGWL
D39V LDAGNRTEAANIAKESGWL
Hungary19A-6 LDAGNRTEAANIAKESGWL
EF3030 LDAGNRTKAANIAKESGWL
*******:***********