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PangenomeTIGR4
serotype 4
D39serotype 2
D39Vserotype 2
Hungary19A-6serotype 19A
EF3030serotype 19F
670-6Bserotype 6B
6A-10serotype 6A
70585serotype 5
A026serotype 19F
A66serotype 3
AP200serotype 11A
ASP0581serotype 12F
ATCC 49619serotype 19F
ATCC 700669serotype 23F
BM6001serotype 19F
BVJ1JLserotype 1
CGSP14serotype 14
G54serotype 19F
HU-OHserotype 3
Hu15serotype 19A
Hu17serotype 19A
INV104serotype 1
INV200serotype 14
JJAserotype 14
MDRSPN001serotype 19F
NCTC7465serotype 1
NCTC7466serotype 2
NU83127serotype 4
OXC141serotype 3
P1031serotype 1
R6serotype 2
SP49serotype 19A
SPN032672serotype 1
SPN034156serotype 3
SPN034183serotype 3
SPN994038serotype 3
SPN994039serotype 3
SPNA45serotype 3
ST556serotype 19F
TCH8431/19Aserotype 19A
Taiwan19F-14serotype 19F
Xen35serotype 4
gamPNI0373serotype 1
⊟Summary[edit | edit source]
- pan ID?: PNEUPAN003569000
- symbol?: sceC
- synonym:
- description?: ABC transporter ATP-binding protein
- ABC transporter ATP-binding protein
- putative ABC transporter ATP-binding protein
- ABC-type antimicrobial peptide transport system, ATPase component
- ABC transporter, ATP-binding protein
- antimicrobial peptide ABC transporter ATPase
- Methionine ABC transporter ATP-binding protein
- peptide ABC transporter ATP-binding protein
- (Putative) Streptococcin E Transporter
- ABC transporter ATP-binding protein - unknown substrate
- ATP-binding cassette domain-containing protein
- bacteriocin export ABC transporter family protein
- putative ABC transporter ATP-binding protein YknY
- putative bacteriocin export ABC transporter, lactococcin 972 group
- pseudogene
descriptions from strain specific annotations:
- strand?: +
- coordinates?: 4680076..4697923
- occurrence?: in 100% of 43 strains
⊟Orthologs[edit | edit source]
⊟Genome Viewer[edit | edit source]
| TIGR4 | |
| D39 | |
| D39V | |
| Hungary19A-6 | |
| EF3030 |
⊟Alignments[edit | edit source]
- alignment of orthologues: CLUSTAL format alignment by MAFFT L-INS-i (v7.505)
TIGR4 MIELKQVSKSFGERELFSNLSMTFEAGKVYALIGSSGSGKTTLMNMIGKLEPYDGTIFYR
D39 MIELKQVSKSFGERELFSNLSMTFEAGKVYALIGSSGSGKTTLMNMIGKLEPYDGTIFYR
D39V MIELKQVSKSFGERELFSNLSMTFEAGKVYALIGSSGSGKTTLMNMIGKLEPYDGTIFYR
Hungary19A-6 MIELKQVSKSFGERELFSNLSMTFEAGKVYALIGSSGSGKTTLMNMIGKLEPYDGTIFYR
EF3030 MIELKQVSKSFGERELFSNLSMTFEAGKVYALIGSSGSGKTTLMNMIGKLEPYDGTIFYR
************************************************************
TIGR4 GKDLANYKSSDFFRHELGYLFQNFGLIENQSIEENLKLGLIGQKLSRSEQRLRQKQALEQ
D39 GKDLANYKSSDFFRHELGYLFQNFGLIENQSIEENLKLGLIGQKLSRSEQRLRQKQALEQ
D39V GKDLANYKSSDFFRHELGYLFQNFGLIENQSIEENLKLGLIGQKLSRSEQRLRQKQALEQ
Hungary19A-6 GKDLANYKSSDFFRHELGYLFQNFGLIENQSIEENLKLGLIGQKLSRSEQRLRQKQALEQ
EF3030 GKDLANYKSSDFFRHELGYLFQNFGLIENQSIEENLKLGLIGQKLSRSEQRLRQKQALEQ
************************************************************
TIGR4 VGLVYLDLDKRIFELSGGESQRVALAKIILKNPPFILADEPTASIDPATSQLIMEILLSL
D39 VGLVYLDLDKRIFELSGGESQRVALAKIILKNPPFILADEPTASIDPATSQLIMEILLSL
D39V VGLVYLDLDKRIFELSGGESQRVALAKIILKNPPFILADEPTASIDPATSQLIMEILLSL
Hungary19A-6 VGLVYLDLDKRIFELSGGESQRVALAKIILKNPPFILADEPTASIDPATSQLIMEILLSL
EF3030 VGLVYLDLDKRIFELSGGESQRVALAKIILKNPPFILADEPTASIDPATSQLIMEILLSL
************************************************************
TIGR4 RDDNRLIIIATHNPAIWEMADEVFTMDHLK
D39 RDDNRLIIIATHNPAIWEMADEVFTMDHLK
D39V RDDNRLIIIATHNPAIWEMADEVFTMDHLK
Hungary19A-6 RDDNRLIIIATHNPAIWEMADEVFTMDHLK
EF3030 RDDNRLIIIATHNPAIWEMADEVFTMDHLK
******************************