PangenomeTIGR4

serotype 4

D39

serotype 2

D39V

serotype 2

Hungary19A-6

serotype 19A

EF3030

serotype 19F

670-6B

serotype 6B

6A-10

serotype 6A

70585

serotype 5

A026

serotype 19F

A66

serotype 3

AP200

serotype 11A

ASP0581

serotype 12F

ATCC 49619

serotype 19F

ATCC 700669

serotype 23F

BM6001

serotype 19F

BVJ1JL

serotype 1

CGSP14

serotype 14

G54

serotype 19F

HU-OH

serotype 3

Hu15

serotype 19A

Hu17

serotype 19A

INV104

serotype 1

INV200

serotype 14

JJA

serotype 14

MDRSPN001

serotype 19F

NCTC7465

serotype 1

NCTC7466

serotype 2

NU83127

serotype 4

OXC141

serotype 3

P1031

serotype 1

R6

serotype 2

SP49

serotype 19A

SPN032672

serotype 1

SPN034156

serotype 3

SPN034183

serotype 3

SPN994038

serotype 3

SPN994039

serotype 3

SPNA45

serotype 3

ST556

serotype 19F

TCH8431/19A

serotype 19A

Taiwan19F-14

serotype 19F

Xen35

serotype 4

gamPNI0373

serotype 1

⊟Summary

• pan ID^?: PNEUPAN003571000
• symbol^?: slgT
• synonym:
• description^?: peptidase domain-containing ABC transporter

  descriptions from strain specific annotations:

  • peptidase domain-containing ABC transporter
  • toxin secretion ABC transporter, ATP-binding/permease protein
  • (Putative) Bacteriocin Transporter
  • ABC transporter ATP-binding/membrane-spanning - hemolysin secretion protein
  • Alpha-hemolysin translocation ATP-binding protein
  • bacteriocin secretion/processing ATP-binding protein
  • peptidase C39
  • putative bacteriocin secretion/processing ATP-binding protein
• strand^?: +
• coordinates^?: 4683932..4689898
• occurrence^?: in 21% of 43 strains

⊟Orthologs

TIGR4:
SP_RS09815
D39:
SPD_RS09335
D39V:
SPV_RS09330
Hungary19A-6:
—
EF3030:
—
670-6B:
—
6A-10:
—
70585:
—
A026:
—
A66:
—
AP200:
—
ASP0581:
—
ATCC 49619:
—
ATCC 700669:
SPN23F_RS10070
BM6001:
—
BVJ1JL:
—
CGSP14:
—
G54:
—
gamPNI0373:
—
HU-OH:
—
Hu15:
—
Hu17:
—
INV104:
—
INV200:
—
JJA:
SPJ_RS09655
MDRSPN001:
—
NCTC7465:
—
NCTC7466:
DQM66_RS09330
NU83127:
EL277_RS10005
OXC141:
—
P1031:
—
R6:
SPR_RS08885
SP49:
—
SPN032672:
—
SPN034156:
—
SPN034183:
—
SPN994038:
—
SPN994039:
—
SPNA45:
—
ST556:
—
Taiwan19F-14:
—
TCH8431/19A:
—
Xen35:
CXP32_RS09940

⊟Genome Viewer

TIGR4
D39
D39V

⊟Alignments

• alignment of orthologues:
  CLUSTAL format alignment by MAFFT L-INS-i (v7.505)
  
  
  TIGR4           MKIPMIYQMENSECGLACCAMILNYFKYEISLNELREIYPSSRSGYSLLSISKVLGDFNI
  D39             MKIPMIYQMENSECGLACCAMILNYFKYEISLNELREIYPSSRSGYSLLSISKVLGDFNI
  D39V            MKIPMIYQMENSECGLACCAMILNYFKYEISLNELREIYPSSRSGYSLLSISKVLGDFNI
                  ************************************************************
  
  TIGR4           SSHAFKASVRDLKPLSFPLICFWESSHFIILEKISKNKFYILDPAKGRQRMSISEFERHY
  D39             SSHAFKASVRDLKPLSFPLICFWESSHFIILEKISKNKFYILDPAKGRQRMSISEFERHY
  D39V            SSHAFKASVRDLKPLSFPLICFWESSHFIILEKISKNKFYILDPAKGRQRMSISEFERHY
                  ************************************************************
  
  TIGR4           SNIILTFKKLDSFMSRKDNKKSPVLKYFFKYRNKLGILFFVTALLYVIQSLVPIANRYII
  D39             SNIILTFKKLDSFMSRKDNKKSPVLKYFFKYRNKLGILFFVTALLYVIQSLVPIANRYII
  D39V            SNIILTFKKLDSFMSRKDNKKSPVLKYFFKYRNKLGILFFVTALLYVIQSLVPIANRYII
                  ************************************************************
  
  TIGR4           DTNFKDDSYSSRMLFTILFIFTVSFSLMYLLRQIYVASLKYIMDKEISYDFMKHLIYLPY
  D39             DTNFKDDSYSSRMLFTILFIFTVSFSLMYLLRQIYVASLKYIMDKEISYDFMKHLIYLPY
  D39V            DTNFKDDSYSSRMLFTILFIFTVSFSLMYLLRQIYVASLKYIMDKEISYDFMKHLIYLPY
                  ************************************************************
  
  TIGR4           SFYEKRTLGDILFRANSIVYIREILSNNFIAAILDLLMIVVYAVVLFSFSKYMVIFLISL
  D39             SFYEKRTLGDILFRANSIVYIREILSNNFIAAILDLLMIVVYAVVLFSFSKYMVIFLISL
  D39V            SFYEKRTLGDILFRANSIVYIREILSNNFIAAILDLLMIVVYAVVLFSFSKYMVIFLISL
                  ************************************************************
  
  TIGR4           SLALSIVMYPIIKISKNLIDKNIKEKVNVQNITSEVISKNSDIKLTGEEEFWINKWDNFN
  D39             SLALSIVMYPIIKISKNLIDKNIKEKVNVQNITSEVISKNSDIKLTGEEEFWINKWDNFN
  D39V            SLALSIVMYPIIKISKNLIDKNIKEKVNVQNITSEVISKNSDIKLTGEEEFWINKWDNFN
                  ************************************************************
  
  TIGR4           TKQLIIGRKLDIHLSIVSSITNVLQIILPVLTLIVGVNIKTFEQLTLGQIVAISTVSPYF
  D39             TKQLIIGRKLDIHLSIVSSITNVLQIILPVLTLIVGVNIKTFEQLTLGQIVAISTVSPYF
  D39V            TKQLIIGRKLDIHLSIVSSITNVLQIILPVLTLIVGVNIKTFEQLTLGQIVAISTVSPYF
                  ************************************************************
  
  TIGR4           ISPIISLSDNYIQLMLLKGYFLRIEDVFNTKSELIPERVSQDIKFDKKIELKDIWYKYGL
  D39             ISPIISLSDNYIQLMLLKGYFLRIEDVFNTKSELIPERVSQDIKFDKKIELKDIWYKYGL
  D39V            ISPIISLSDNYIQLMLLKGYFLRIEDVFNTKSELIPERVSQDIKFDKKIELKDIWYKYGL
                  ************************************************************
  
  TIGR4           FDDYVLKGINVTIKKGETVAIVGESGSGKSTLAKILLGLLEPNIGSIEVDGVEKEEIGQT
  D39             FDDYVLKGINVTIKKGETVAIVGESGSGKSTLAKILLGLLEPNIGSIEVDGVEKEEIGQT
  D39V            FDDYVLKGINVTIKKGETVAIVGESGSGKSTLAKILLGLLEPNIGSIEVDGVEKEEIGQT
                  ************************************************************
  
  TIGR4           LYRKIFGAVLQNSTLSYGTLRENLTFGHFVSDEELMTNLNSIGLSNVVKSLPLGLETIIA
  D39             LYRKIFGAVLQNSTLSYGTLRENLTFGHFVSDEELMTNLNSIGLSNVVKSLPLGLETIIA
  D39V            LYRKIFGAVLQNSTLSYGTLRENLTFGHFVSDEELMTNLNSIGLSNVVKSLPLGLETIIA
                  ************************************************************
  
  TIGR4           EEGNNFSGGQQQMILLARCLLSKPSVVVLDEATSSLDNLSQQITTSYLSEIGTTKILIAH
  D39             EEGNNFSGGQQQMILLARCLLSKPSVVVLDEATSSLDNLSQQITTSYLSEIGTTKILIAH
  D39V            EEGNNFSGGQQQMILLARCLLSKPSVVVLDEATSSLDNLSQQITTSYLSEIGTTKILIAH
                  ************************************************************
  
  TIGR4           RLDTIKSADKILVMHNGEIVEIGTHRELLELGGIYKQLYSNN
  D39             RLDTIKSADKILVMHNGEIVEIGTHRELLELGGIYKQLYSNN
  D39V            RLDTIKSADKILVMHNGEIVEIGTHRELLELGGIYKQLYSNN
                  ******************************************