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PangenomeTIGR4
serotype 4
D39serotype 2
D39Vserotype 2
Hungary19A-6serotype 19A
EF3030serotype 19F
670-6Bserotype 6B
6A-10serotype 6A
70585serotype 5
A026serotype 19F
A66serotype 3
AP200serotype 11A
ASP0581serotype 12F
ATCC 49619serotype 19F
ATCC 700669serotype 23F
BM6001serotype 19F
BVJ1JLserotype 1
CGSP14serotype 14
G54serotype 19F
HU-OHserotype 3
Hu15serotype 19A
Hu17serotype 19A
INV104serotype 1
INV200serotype 14
JJAserotype 14
MDRSPN001serotype 19F
NCTC7465serotype 1
NCTC7466serotype 2
NU83127serotype 4
OXC141serotype 3
P1031serotype 1
R6serotype 2
SP49serotype 19A
SPN032672serotype 1
SPN034156serotype 3
SPN034183serotype 3
SPN994038serotype 3
SPN994039serotype 3
SPNA45serotype 3
ST556serotype 19F
TCH8431/19Aserotype 19A
Taiwan19F-14serotype 19F
Xen35serotype 4
gamPNI0373serotype 1
⊟Summary[edit | edit source]
- pan ID?: PNEUPAN003605000
- symbol?: scbB
- synonym:
- description?: bacteriocin-associated integral membrane family protein
- bacteriocin-associated integral membrane family protein
- putative membrane protein
- immunity protein, putative
- immunity protein
- bacteriocin-associated integral membrane protein
- putative immunity protein
- (Putative) Streptococcin B Immunity protein
- bacteriocin-associated protein
- Conserved hypothetical protein
- immunity protein, probable
- Uncharacterized protein conserved in bacteria
- pseudogene
descriptions from strain specific annotations:
- strand?: -
- coordinates?: 4733098..4735128
- occurrence?: in 100% of 43 strains
⊟Orthologs[edit | edit source]
⊟Genome Viewer[edit | edit source]
| TIGR4 | |
| D39 | |
| D39V | |
| Hungary19A-6 | |
| EF3030 |
⊟Alignments[edit | edit source]
- alignment of orthologues: CLUSTAL format alignment by MAFFT L-INS-i (v7.505)
TIGR4 MKRLFILISMVLVSLYMVITSVDHREEILFGNYPSVDVTGMMINQPVASREEVTEALSHL
D39 MKRLFILISMVLVSLYMVITSVDHREEILFGNYPSVDVTGMMTNQPVASREEVTEALSHL
D39V MKRLFILISMVLVSLYMVITSVDHREEILFGNYPSVDVTGMMTNQPVASREEVTEALSHL
Hungary19A-6 MKRLFILISMVLVSLYMVITSVDHREEILFGNYPSVDVTGMMINQPVASREEVTEALSHL
EF3030 MKRLFILISMVLVSLYMVITSVDHREEILFGNYPSVDVTGMMINQPVASREEVTEALSHL
****************************************** *****************
TIGR4 AVEHNSLIARRIVEPNEAGETRFTYATYGEGKLPEGLTISSKESAETSDLLGSYLIVSGS
D39 AVEHNSLIARRIVEPNEAGETRFTYATYGEGKLPEGLTISSKESAETSDLLGSYLIVSGS
D39V AVEHNSLIARRIVEPNEAGETRFTYATYGEGKLPEGLTISSKESAETSDLLGSYLIVSGS
Hungary19A-6 AVEHNSLIARRIVEPNEAGETRFTYVTYGEGKLPEGLTISSKESAETSDLLGSYLIVSGS
EF3030 AVEHNSLIARRIVEPNEAGETLFTYATYGEGELPEGLTISSKESAETSDLLGSYLIVSGS
********************* ***.*****:****************************
TIGR4 LDGVSLQTTLKELGYQGFVSNGEDPFSIVLLLTATPMVLLSLAIFLLTFMSLTLIYRIKS
D39 LDGVSLQTTLKELGYQGFVSNGEDPFSIVLLLTATPMVLLSLAIFLLTFMSLTLIYRIKS
D39V LDGVSLQTTLKELGYQGFVSNGEDPFSIVLLLTATPMVLLSLAIFLLTFMSLTLIYRIKS
Hungary19A-6 LDGVSLQTTLKELGYQGFVSNGEDPFSIVLLLAATPMVLLSLAIFLLTFMSLTLIYRIKS
EF3030 LDGVSLQTTLKELGYQGFVSNGEDPFSIVLLLTATPMVLLSLAIFLLTFMSLTLIYRIKS
********************************:***************************
TIGR4 LRQAGIRLIAGESLFGVALRPVLEDVRQLICSVLVSSLLGLGILWYQGALFMATVQLVII
D39 LRQAGIRLIAGESLFGVALRPVLEDVRQLICSVLVSSLLGLGILWYQGALFMATVQLVII
D39V LRQAGIRLIAGESLFGVALRPVLEDVRQLICSVLVSSLLGLGILWYQGALFMATVQLVII
Hungary19A-6 LRQAGIRLIAGESLFGVALRPVLEDVRQLICSVLVSSLLGLGILWYQGALFMATVQLVII
EF3030 LRQAGIRLIAGESLFGVALRPVLEDVRQLICSVLVSSLLGLGILWYQGALFMATVQLVII
************************************************************
TIGR4 ALLLYGLTLAGISTLLSVVYLLGLQENSLVDLLKGKLPLKRMMTLMMVGQLLAVLVVGSS
D39 ALLLYGLTLAGISTLLSVVYLLGLQENSLVDLLKGKLPLKRMMTLMMVGQLLAVLVVGSS
D39V ALLLYGLTLAGISTLLSVVYLLGLQENSLVDLLKGKLPLKRMMTLMMVGQLLAVLVVGSS
Hungary19A-6 ALLLYGLTLAGISTLLSVVHLLGLQENSLVDLLKGKLPLKRMMTLMMVGQLLAVLVVGSS
EF3030 ALLLYGLTLAGISTLLSVVYLLGLQENSLVDLLKGKLPLKRMMTLMMVGQLLAVLVVGSS
*******************:****************************************
TIGR4 ATALLPHYREMQEMERASNKWSQSSDRYRLSFGWSSAFADEEGTRKDNREWQTFTEERLA
D39 ATALLPHYREMQEMERASNKWSQSSDRYRLSFGWSSAFADEEGTRKDNREWQTFTEERLA
D39V ATALLPHYREMQEMERASNKWSQSSDRYRLSFGWSSAFADEEGTRKDNREWQTFTEERLA
Hungary19A-6 ATALLPHYREMQEMERASNKWSQSSDRYRLSFGWSSAFADEEGTRKDNREWQTFTEERLA
EF3030 ATALLPHYREMQEMERASNKWSQSSDRYRLSFGWSSAFADEEGTRKDNREWQTFTEERLA
************************************************************
TIGR4 NTDSFYIMSNVDNFSDGAEVDLDGNRLSDYTPSGNVIYVSPRYLIEEKITVSSEFMDKMQ
D39 NTDSFYIMSNVDNFSDGAEVDLDGNRLSDYTPSGNVIYVSPRYLIEEKITVSSEFMDKMQ
D39V NTDSFYIMSNVDNFSDGAEVDLDGNRLSDYTPSGNVIYVSPRYLIEEKITVSSEFMDKMQ
Hungary19A-6 NTDSFYIMSNVDNFSDGAEVDLDGNRLSDYIPSGNVIYVSPRYLIEEKITVSSEFIDKMQ
EF3030 NTDSFYIMSNVDNFSDGAEVDLDGNRLSDYTPSGNVIYVSPRYLIEEKITVSSEFMDKMQ
****************************** ************************:****
TIGR4 NLSEGEFGLILPESLREQSVYYQGLFTDYLQNFSSESVEVTSQKHYLPQVRLAFTETGQE
D39 NLSEGEFGLILPESLREQSVYYQGLFTDYLQNFSSESVEVTSQKHYLPQVRLAFTETGQE
D39V NLSEGEFGLILPESLREQSVYYQGLFTDYLQNFSSESVEVTSQKHYLPQVRLAFTETGQE
Hungary19A-6 NLSEGEFGLILPESLREQSAYYQGLFTDYLQNFSSESVEVTSQKHYFPQVRLAFTETGQE
EF3030 NLSEGEFGLILPESLREQSTYYQGLFTDYLQNFSSESVEVTSQKYYLPQVRLAFTETGQE
*******************.************************:*:*************
TIGR4 RFLYNDGYKTTRQYLKDPIIVVLTPQATGTRPVAGMLWGTTANSALKLDRYGDSITALKE
D39 RFLYNDGYKTTRQYLKDPIIVVLTPQATGARPVAGMLWGTTANSALKLDRYGDSITALKE
D39V RFLYNDGYKTTRQYLKDPIIVVLTPQATGARPVAGMLWGTTANSALKLDRYGDSITALKE
Hungary19A-6 RFLYNDGYKTTRQYLKDPIIVVLTPQATGTRPVAGMLWGTTANSALKLDRYGDSITALKE
EF3030 RFLYNDGYKTTRQYLKDPIIVVLTPQATGTRPVAGMLWGTTANSALKLDRYGDSITALKE
*****************************:******************************
TIGR4 KGLYHKVSYLVKSQLFFAKVLNDKRVEFYSLLIGTILTLSTAILLFDSMNLLYFEQFRRE
D39 QGLYHKVSYLVKSQLFFAKVLNDKRVEFYSLLIGTILTLSTAILLFDSMNLLYFEQFRRD
D39V QGLYHKVSYLVKSQLFFAKVLNDKRVEFYSLLIGTILTLSTAILLFDSMNLLYFEQFRRD
Hungary19A-6 QGLYHKVSYLVKSQLFFAKVLNDKRVEFYSLLIGTILTLSTAILLFDSMNLLYFEQFRRE
EF3030 QGLYHKVSYLVKSQLFFAKVLNDKRVEFYSLLIGTILTLSTAILLFDSMNLLYFEQFRRE
:**********************************************************:
TIGR4 LMIKRLAGMTIYELHGKYLLAQGGVLLLGLVLSSILTRDGLISALVVALFTLNALLILVR
D39 LMIKRLAGMTIYELHGKYLLAQGGVLLLGLVLSSILTRDGLISALVVALFTLNALLILVR
D39V LMIKRLAGMTIYELHGKYLLAQGGVLLLGLVLSSILTRDGLISALVVALFTLNALLILVR
Hungary19A-6 LMIKRLAGMTIYELHGKYLLAQGGVLLLGLVLSSILTRDGLISALVVALFTLNALLILVR
EF3030 LMIKRLAGMTIYELHGKYLLAQGGVLLLGLVLSSILTRDGLISALVLALFTLNALLILVR
**********************************************:*************
TIGR4 QDKKEEAGSMAVLKGK
D39 QDKKEEAGSMAVLKGK
D39V QDKKEEAGSMAVLKGK
Hungary19A-6 QDKKEEAGSMAVLKGK
EF3030 QDKKEEAGSMAVLKGK
****************