Jump to navigation
Jump to search
PangenomeTIGR4
serotype 4
D39serotype 2
D39Vserotype 2
Hungary19A-6serotype 19A
EF3030serotype 19F
670-6Bserotype 6B
6A-10serotype 6A
70585serotype 5
A026serotype 19F
A66serotype 3
AP200serotype 11A
ASP0581serotype 12F
ATCC 49619serotype 19F
ATCC 700669serotype 23F
BM6001serotype 19F
BVJ1JLserotype 1
CGSP14serotype 14
G54serotype 19F
HU-OHserotype 3
Hu15serotype 19A
Hu17serotype 19A
INV104serotype 1
INV200serotype 14
JJAserotype 14
MDRSPN001serotype 19F
NCTC7465serotype 1
NCTC7466serotype 2
NU83127serotype 4
OXC141serotype 3
P1031serotype 1
R6serotype 2
SP49serotype 19A
SPN032672serotype 1
SPN034156serotype 3
SPN034183serotype 3
SPN994038serotype 3
SPN994039serotype 3
SPNA45serotype 3
ST556serotype 19F
TCH8431/19Aserotype 19A
Taiwan19F-14serotype 19F
Xen35serotype 4
gamPNI0373serotype 1
⊟Summary[edit | edit source]
- pan ID?: PNEUPAN003610000
- symbol?: tatD
- synonym:
- description?: TatD family hydrolase
- TatD family hydrolase
- TatD related DNase
- TatD family deoxyribonuclease
- deoxyribonuclease, TatD family
- putative metal-dependent hydrolase YcfH
- hydrolase, TatD family
- deoxyribonuclease TatD family
- hydrolase, TatD family protein
- putative deoxyribonuclease YcfH
- Conserved hypothetical protein
- hydrolase, putative
- hydrolase TatD
- Mg-dependent DNase
- Putative deoxyribonuclease TatD
- putative hydrolase
- TatD family protein hydrolase
descriptions from strain specific annotations:
- strand?: -
- coordinates?: 4738389..4739162
- occurrence?: in 100% of 43 strains
⊟Orthologs[edit | edit source]
⊟Genome Viewer[edit | edit source]
| TIGR4 | |
| D39 | |
| D39V | |
| Hungary19A-6 | |
| EF3030 |
⊟Alignments[edit | edit source]
- alignment of orthologues: CLUSTAL format alignment by MAFFT L-INS-i (v7.505)
TIGR4 MIFDTHTHLNVEEFAGREAEEIALAAEMGVTQMNIVGFDKPTIEHALELVDEYEQLYATI
D39 MIFDTHTHLNVEEFAGREAEEIALAAEMGVTQMNIVGFDKPTIEHALELVDEYEQLYATI
D39V MIFDTHTHLNVEEFAGREAEEIALAAEMGVTQMNIVGFDKPTIEHALELVDEYEQLYATI
Hungary19A-6 MIFDTHTHLNVEEFAGREAEEIALADEMGVTQMNIVGFDKPTIEHALELVDEYEQLYATI
EF3030 MIFDTHTHLNVEEFAGREAEEIALAAEMGVTQMNIVGFDKPTIERALELVDEYDQLYATI
************************* ******************:********:******
TIGR4 GWHPTEAGTYTEEVEAYLLDKLKHSKVVALGEIGLDYHWMTAPKEVQEQVFRRQIQLSKD
D39 GWHPTEAGTYTEEVEAYLLDKLKHSKVVALGEIGLDYHWMTAPKEVQEQVFRRQIQLSKD
D39V GWHPTEAGTYTEEVEAYLLDKLKHSKVVALGEIGLDYHWMTAPKEVQEQVFRRQIQLSKD
Hungary19A-6 GWHPTEAGTYTEEVEAYLLDKLKHSKVVALGEIGLDYHWMTAPKEVQEQVFRRQIQLSKD
EF3030 GWHPTEAGTYTEEVEAYLLDKLKHPKVVALGEIGLDYHWMTAPKEVQEQVFRRQIQLSKD
************************.***********************************
TIGR4 LDLPFVVHTRDALEDTYEIIKSEGVGPRGGIMHSFSGTLEWAEKFVDLGMTISFSGVVTF
D39 LDLPFVVHTRDALEDTYEIIKSEGVGPRGGIMHSFSGTLEWAEKFVDLGMTISFSGVVTF
D39V LDLPFVVHTRDALEDTYEIIKSEGVGPRGGIMHSFSGTLEWAEKFVDLGMTISFSGVVTF
Hungary19A-6 LDLPFVVHTRDALEDTYEIIKSEGVGPRGGIMHSFSGTLEWAEKFVDLGMTISFSGVVTF
EF3030 LDLPFVVHTRDALEDTYEIIKSEGVGPRGGIMHSFSGTLEWAEKFVDLGMTISFSGVVTF
************************************************************
TIGR4 KKATDLQEAAKELPLDKMLVETDAPYLAPVPKRGRENKTAYTRYVVDFIADLRGMTTEEL
D39 KKATDLQEAAKELPLDKMLVETDAPYLAPVPKRGRENKTAYTRYVVDFIADLRGMTTEEL
D39V KKATDLQEAAKELPLDKMLVETDAPYLAPVPKRGRENKTAYTRYVVDFIADLRGMTTEEL
Hungary19A-6 KKATDLQEAAKELPLDKMLVETDAPYLAPVPKRGRENKTAYTRYVVDFIADLRGMTTEEL
EF3030 KKATDLQEAAKELPLDKILVETDAPYLAPVPKRGRENKTTYTRYVVDFIADLRGMTTEEL
*****************:*********************:********************
TIGR4 AVATTANAERIFGLDSK
D39 AVATTANAERIFGLDSK
D39V AVATTANAERIFGLDSK
Hungary19A-6 AVATTANAERIFGLDSK
EF3030 AVATTANAERIFGLDSK
*****************