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PangenomeTIGR4
serotype 4
D39serotype 2
D39Vserotype 2
Hungary19A-6serotype 19A
EF3030serotype 19F
670-6Bserotype 6B
6A-10serotype 6A
70585serotype 5
A026serotype 19F
A66serotype 3
AP200serotype 11A
ASP0581serotype 12F
ATCC 49619serotype 19F
ATCC 700669serotype 23F
BM6001serotype 19F
BVJ1JLserotype 1
CGSP14serotype 14
G54serotype 19F
HU-OHserotype 3
Hu15serotype 19A
Hu17serotype 19A
INV104serotype 1
INV200serotype 14
JJAserotype 14
MDRSPN001serotype 19F
NCTC7465serotype 1
NCTC7466serotype 2
NU83127serotype 4
OXC141serotype 3
P1031serotype 1
R6serotype 2
SP49serotype 19A
SPN032672serotype 1
SPN034156serotype 3
SPN034183serotype 3
SPN994038serotype 3
SPN994039serotype 3
SPNA45serotype 3
ST556serotype 19F
TCH8431/19Aserotype 19A
Taiwan19F-14serotype 19F
Xen35serotype 4
gamPNI0373serotype 1
⊟Summary[edit | edit source]
- pan ID?: PNEUPAN003649000
- symbol?: —
- synonym:
- description?: SLC13 family permease
- SLC13 family permease
- membrane protein
- dicarboxylate carrier protein
- C4-dicarboxylate ABC transporter
- Conserved hypothetical protein
- Malonate permease
- citrate transporter family protein
- Di- and tricarboxylate transporter
- dicarboxylate carrier MatC domain protein
- membrane protein, putative
descriptions from strain specific annotations:
- strand?: +
- coordinates?: 4794047..4795361
- occurrence?: in 100% of 43 strains
⊟Orthologs[edit | edit source]
⊟Genome Viewer[edit | edit source]
| TIGR4 | |
| D39 | |
| D39V | |
| Hungary19A-6 | |
| EF3030 |
⊟Alignments[edit | edit source]
- alignment of orthologues: CLUSTAL format alignment by MAFFT L-INS-i (v7.505)
TIGR4 MIHLIMISAIALAIGIGYRTKINIGLLAIAFSYLIATTLMGLSPKELLHFWPTSLFFTIF
D39 MIHLIMISAIALAIGIGYRTKINIGLLAIAFSYLIATTLMGLSPKELLHFWPTSLFFTIF
D39V MIHLIMISAIALAIGIGYRTKINIGLLAIAFSYLIATTLMGLSPKELLHFWPTSLFFTIF
Hungary19A-6 MIHLIMISAIALAIGIGYRTKINIGLLAIAFSYLIATTLMGLSPKELLHFWPTSLFFTIF
EF3030 MIHLIMISAIALAIGIGYRTKINIGLLAIAFSYLIATTLMGLSPKELLHFWPTSLFFTIF
************************************************************
TIGR4 SVSLFYNVATTNGTLDVLAQHILYRTRTHPNALYMILYLMATLLSALGAGFFTTMAVCCP
D39 SVSLFYNVAITNGTLDVLAQHILYRTRTHPNALYMILYLMATLLSALGAGFFTTMAVCCP
D39V SVSLFYNVAITNGTLDVLAQHILYRTRTHPNALYMILYLMATLLSALGAGFFTTMAVCCP
Hungary19A-6 SVSLFYNVATTNGTLDVLAQHILYRTRTHPNALYMILYLMATLLSALGAGFFTTMAVCCP
EF3030 SVSLFYNFAITNGTLDVLAQHILYRTRTYPNALYMILYLMATLLSALGAGFFTTMAVCCP
*******.* ******************:*******************************
TIGR4 LAITLCQKADKHPLIGAQAVNWGASGGANLITSSSGIVFQGLFKQMGWEEQAFSLGNHIF
D39 LAITLCQKADKHPLIGAQAVNWGASGGANLITSSSGIVFQGLFKQMGWEEQAFSLGNHIF
D39V LAITLCQKADKHPLIGAQAVNWGASGGANLITSSSGIVFQGLFKQMGWEEQAFSLGNHIF
Hungary19A-6 LAITLCQKADKHPLIGAQAVNWGASGGANLITSSSGIVFQGLFKQMGWEEQAFSLGNHIF
EF3030 LAITLCQKADKHPLIGAQAVNWGASGGANLITSSSGIVFQGLFKQMGWEDQAFSLGNHIF
*************************************************:**********
TIGR4 IVSIIYPLIVLLLLSCYSHYSKGRTNSSLTIDQPPLLSKVQRQTTLLMISSMVLVWLFPL
D39 IVSIIYPLIVLLLLSCYSHYSKGRTNSSLTIDQPPLLSKVQRQTTLLMISSMVLVWLFPL
D39V IVSIIYPLIVLLLLSCYSHYSKGRTNSSLTIDQPPLLSKVQRQTTLLMISSMVLVWLFPL
Hungary19A-6 IVSIIYPLIVLLLLSCYSHYSKGRTNSSLTIDQPPLLSKVQRQTTLLMISSMVLVWLFPL
EF3030 IVSIIYPLIVLLLLSCYSHYSKGRTNSSLTIDQPPLLSKVQRQTTLLMISSMVLVWLFPL
************************************************************
TIGR4 LHLIFPNIAWIATYQKTFDIGFVSILMVCLALRLKLGKQEAILAKVPWATIIMLCGMSLL
D39 LHLIFPNIAWIATYRKTFDIGFVSILMVCLALRLKLGKQEAILAKVPWATIIMLCGMSLL
D39V LHLIFPNIAWIATYRKTFDIGFVSILMVCLALRLKLGKQEAILAKVPWATIIMLCGMSLL
Hungary19A-6 LHLIFPNIAWIATYQKTFDIGFVSILMVCLALRLKLGKQEAILAKVPWATIIMLCGMSLL
EF3030 LHLIFPNIAWIATYQKTFDIGFVSILMVCLALRLKLGKQEAILAKVPWATIIMLCGMSLL
**************:*********************************************
TIGR4 MSLAVKSGLVTLIGHLMTTTIPHFWLPLFFCVIAGVMSLFSSTLSVVAPALFPIIAIISA
D39 MSLAVKSGLVTLIGHLMTTTIPHFWLPLFFCVIAGVMSLFSSTLSVVAPALFPIIAIISA
D39V MSLAVKSGLVTLIGHLMTTTIPHFWLPLFFCVIAGVMSLFSSTLSVVAPALFPIIAIISA
Hungary19A-6 MSLAVKSGLVTLIGHLMTTTIPHFWLPLFFCVIAGVMSLFSSTLSVVAPALFPIIAIISA
EF3030 MSLAVKSGLVTLIGHLMTTSIPHFWLPLFFCVIAGVMSLFSSTLSVVAPALFPIIAIISA
*******************:****************************************
TIGR4 QNPQIDIHLLTTATVIGALSTNISPFSSAGSLIQLSLPNIEERGLAFKKQIILGVPISLS
D39 QNPQIDIHLLTTATVIGALSTNISPFSSAGSLIQLSLPNIEERGLAFKKQIILGVPISLS
D39V QNPQIDIHLLTTATVIGALSTNISPFSSAGSLIQLSLPNIEERGLAFKKQIILGVPISLS
Hungary19A-6 QNPQIDIHLLTTATVIGALSTNISPFSSAGSLIQLSLPNIEERGLAFKKQIILGVPISLS
EF3030 QNPQIDIHLLTTATVIGALSTNISPFSSAGSLIQLSLPNIEERGLAFKKQIILGVPISLS
************************************************************
TIGR4 LGLLTTWILILLASLS
D39 LGLLTTWILILLASLS
D39V LGLLTTWILILLASLS
Hungary19A-6 LGLLTTWILILLASLS
EF3030 LGLLTTWILILLASLS
****************