Jump to navigation
Jump to search
PangenomeTIGR4
serotype 4
D39serotype 2
D39Vserotype 2
Hungary19A-6serotype 19A
EF3030serotype 19F
670-6Bserotype 6B
6A-10serotype 6A
70585serotype 5
A026serotype 19F
A66serotype 3
AP200serotype 11A
ASP0581serotype 12F
ATCC 49619serotype 19F
ATCC 700669serotype 23F
BVJ1JLserotype 1
CGSP14serotype 14
G54serotype 19F
HU-OHserotype 3
Hu15serotype 19A
Hu17serotype 19A
INV104serotype 1
INV200serotype 14
JJAserotype 14
MDRSPN001serotype 19F
NCTC7466serotype 2
NU83127serotype 4
OXC141serotype 3
P1031serotype 1
R6serotype 2
SP49serotype 19A
SPN032672serotype 1
SPN034156serotype 3
SPN034183serotype 3
SPN994038serotype 3
SPN994039serotype 3
SPNA45serotype 3
ST556serotype 19F
TCH8431/19Aserotype 19A
Taiwan19F-14serotype 19F
Xen35serotype 4
gamPNI0373serotype 1
⊟Summary[edit | edit source]
- pan ID?: PNEUPAN003677000
- symbol?: tktN
- synonym:
- description?: Transketolase
- Transketolase
- putative transketolase subunit
- carbohydrate degradation protein
- transketolase, thiamine disphosphate-binding subunit
- transketolase, N-terminal subunit
- transketolase N-terminal section
- Apulose-4-phosphate transketolase subunit A
- dehydrogenase E1 component family protein
- Putative transketolase n-terminal section
- putative transketolase N-terminal subunit
- Transketolase, N-terminal section
- Transketolase, thiamine diphosphate binding domain protein
- Transketolase N-terminal-like protein
- transketolase N-terminal subunit
descriptions from strain specific annotations:
- strand?: +
- coordinates?: 4704301..4705158
- occurrence?: in 100% of 41 strains
⊟Orthologs[edit | edit source]
⊟Genome Viewer[edit | edit source]
| TIGR4 | |
| D39 | |
| D39V | |
| Hungary19A-6 | |
| EF3030 |
⊟Alignments[edit | edit source]
- alignment of orthologues: CLUSTAL format alignment by MAFFT L-INS-i (v7.505)
TIGR4 MILSKNREDGLRKFATNIRLNTLRTLNHLGFGHYGGSLSIVEVLAVLYGEIMPMTPEIFA
D39 MILSKNREDGLRKFATNIRLNTLRTLNHLGFGHYGGSLSIVEVLAVLYGEIMPMTPEIFA
D39V MILSKNREDGLRKFATNIRLNTLRTLNHLGFGHYGGSLSIVEVLAVLYGEIMPMTPEIFA
Hungary19A-6 MILSKNREDGLRKFATNIRLNTLRTLNHLGFGHYGGSLSIVEVLAVLYGEIMPMTPEIFA
EF3030 MILSKNREDELRKFATNIRLNTLRTLNHLGFGHYGGSLSIVEVLAVLYGEIMPMTPEIFA
********* **************************************************
TIGR4 ARDRDYFILSKGHGGPALYSTLYLNGFFDKEFLYSLNTNGTKLPSHPDRNLTPGIDMTTG
D39 ARDRDYFILSKGHGGPALYSTLYLNGFFDKEFLYSLNTNGTKLPSHPDRNLTPGIDMTTG
D39V ARDRDYFILSKGHGGPALYSTLYLNGFFDKEFLYSLNTNGTKLPSHPDRNLTPGIDMTTG
Hungary19A-6 ARDRDYFILSKGHGGPALYSTLYLNGFFDKEFLYSLNTNGTKLPSHPDRNLTPGIDMTTG
EF3030 ARDRDYFILSKGHGGPALYSTLYLNGFFDKEFLYSLNTNGTKLPSHPDRNLTPGIDMTTG
************************************************************
TIGR4 SLGQGISVATGLAYGQRIRKSPFYTYAIVGDGELNEGQCWEAIQFASHQQLSNLIVFVDD
D39 SLGQGISVATGLAYGQRIRKSPFYTYAIVGDGELNEGQCWEAIQFASHQQLSNLIVFVDD
D39V SLGQGISVATGLAYGQRIRKSPFYTYAIVGDGELNEGQCWEAIQFASHQQLSNLIVFVDD
Hungary19A-6 SLGQGISVATGLAYGQRIRKSPFYTYAIVGDGELNEGQCWEAIQFASHQQLSNLIVFVDD
EF3030 SLGQGISVATGLAYGQRIRKSPFYTYAIVGDGELNEGQCWEAIQFASHQQLSNLIVFVDD
************************************************************
TIGR4 NKKQLDGFTKDICNPGDFVEKFSAFGFESIRVKGSDIREIYEGIVQLKQSNNSSPKCIVL
D39 NKKQLDGFTKDICNPGDFVEKFSAFGFESIRVKGSDIREIYEGIVQLKQSNNSSPKCIVL
D39V NKKQLDGFTKDICNPGDFVEKFSAFGFESIRVKGSDIREIYEGIVQLKQSNNSSPKCIVL
Hungary19A-6 NKKQLDGFTKDICNSGDFVEKFSAFGFESIRVKGSDIREIYEGIVQLKQSNNSSPKCIVL
EF3030 NKKQLDGFTKDICNPGDFVEKFSAFGFESIRVKGSDIREIYEGIVQLKQSNNSSPKCIVL
**************.*********************************************
TIGR4 DTIKGQGVQELEEMKSNHHLRPTVEEKQMLTSVVERLSQELEETE
D39 DTIKGQGVQELEEMKSNHHLRPTVEEKQMLTSVVERLSQELEETE
D39V DTIKGQGVQELEEMKSNHHLRPTVEEKQMLTSVVERLSQELEETE
Hungary19A-6 DTIKGQGVQELEEMKSNHHLRPTVEEKQMLTSVVERLSQELEETE
EF3030 DTIKGQGVQELEEMKSNHHLRPTVEERQMLTSVVERLSQELEETE
**************************:******************