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PangenomeTIGR4
serotype 4
D39serotype 2
D39Vserotype 2
Hungary19A-6serotype 19A
EF3030serotype 19F
670-6Bserotype 6B
6A-10serotype 6A
70585serotype 5
A026serotype 19F
A66serotype 3
AP200serotype 11A
ASP0581serotype 12F
ATCC 49619serotype 19F
ATCC 700669serotype 23F
BM6001serotype 19F
BVJ1JLserotype 1
CGSP14serotype 14
G54serotype 19F
HU-OHserotype 3
Hu15serotype 19A
Hu17serotype 19A
INV104serotype 1
INV200serotype 14
JJAserotype 14
MDRSPN001serotype 19F
NCTC7465serotype 1
NCTC7466serotype 2
NU83127serotype 4
OXC141serotype 3
P1031serotype 1
R6serotype 2
SP49serotype 19A
SPN032672serotype 1
SPN034156serotype 3
SPN034183serotype 3
SPN994038serotype 3
SPN994039serotype 3
SPNA45serotype 3
ST556serotype 19F
TCH8431/19Aserotype 19A
Taiwan19F-14serotype 19F
Xen35serotype 4
gamPNI0373serotype 1
⊟Summary[edit | edit source]
- pan ID?: PNEUPAN003684000
- symbol?: comGD
- synonym:
- description?: competence type IV pilus minor pilin ComGD
- competence type IV pilus minor pilin ComGD
- competence protein CglD
- putative competence protein
- Competence protein
- type II secretion system protein
- Late competence protein ComGD
- Late competence protein ComGD, access of DNA to ComEA, FIG038316
- prepilin-type cleavage/methylation N-terminal domain protein
- prepilin-type N-terminal cleavage/methylation domain protein
- Type II secretory pathway, pseudopilin PulG
descriptions from strain specific annotations:
- strand?: -
- coordinates?: 4827507..4827911
- occurrence?: in 100% of 43 strains
⊟Orthologs[edit | edit source]
SPN034183:
SPN034183_RS09965 (comGD)
SPN994038:
SPN994038_RS09875 (comGD)
SPN994039:
SPN994039_RS09880 (comGD)
⊟Genome Viewer[edit | edit source]
| TIGR4 | |
| D39 | |
| D39V | |
| Hungary19A-6 | |
| EF3030 |
⊟Alignments[edit | edit source]
- alignment of orthologues: CLUSTAL format alignment by MAFFT L-INS-i (v7.505)
TIGR4 ----------MIKAFTMLESLLVLGLVSILALGLSGSVQSTFSAVEEQIFFMEFEELYRE
D39 ----------MIKAFTMLESLLVLGLVSILALGLSGSVQSTFSAVEEQIFFMEFEELYRE
D39V ----------MIKAFTMLESLLVLGLVSILALGLSGSVQSTFSAVEEQIFFMEFEELYRE
Hungary19A-6 MLNKIRLKRSQIKAFTMLESLLVLGLVSILALGLSGSVQSTFAAVEEQIFFMEFEELYRE
EF3030 ----------MIKAFTMLESLLALSLVSILALGLSGSVQSTFAAVEEQIFFMEFEELYRE
***********.*.*****************:*****************
TIGR4 TQKRSVASQQKTSLNLDGQTLSNGSQKLPVPKGIQAPSGQSITFDRAGGNSSLAKVEFQT
D39 TQKRSVASQQKTSLNLDGQMISNGSQKLTVPKGIQAPSGQSITFDRAGGNSSLAKVEFQT
D39V TQKRSVASQQKTSLNLDGQMISNGSQKLTVPKGIQAPSGQSITFDRAGGNSSLAKVEFQT
Hungary19A-6 TQKRSVASQQKTSLSIDGQTISNGSQKLTVPKGIQAPSGQSITFDRAGGNSSLAKVEFQT
EF3030 TQKRSVASQQKTNLNLDGQTLSNGSQKLTVPKGIQAPSGQSITFDRAGGNSSLAKVEFQT
************.*.:*** :*******.*******************************
TIGR4 SKGAIRYQLYLGNGKIKRIKETKN
D39 SKGAIRYQLYLGNGKIKRIKETKN
D39V SKGAIRYQLYLGNGKIKRIKETKN
Hungary19A-6 SKGAIRYQLYLGNGKIKRIKETKN
EF3030 SKGAIRYQLYLGNGKIKRIKETKN
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