Jump to navigation
Jump to search
PangenomeTIGR4
serotype 4
D39serotype 2
D39Vserotype 2
Hungary19A-6serotype 19A
EF3030serotype 19F
670-6Bserotype 6B
6A-10serotype 6A
70585serotype 5
A026serotype 19F
A66serotype 3
AP200serotype 11A
ASP0581serotype 12F
ATCC 49619serotype 19F
ATCC 700669serotype 23F
BVJ1JLserotype 1
CGSP14serotype 14
G54serotype 19F
HU-OHserotype 3
Hu15serotype 19A
Hu17serotype 19A
INV104serotype 1
INV200serotype 14
JJAserotype 14
MDRSPN001serotype 19F
NCTC7466serotype 2
NU83127serotype 4
OXC141serotype 3
P1031serotype 1
R6serotype 2
SP49serotype 19A
SPN032672serotype 1
SPN034156serotype 3
SPN034183serotype 3
SPN994038serotype 3
SPN994039serotype 3
SPNA45serotype 3
ST556serotype 19F
TCH8431/19Aserotype 19A
Taiwan19F-14serotype 19F
Xen35serotype 4
gamPNI0373serotype 1
⊟Summary[edit | edit source]
- pan ID?: PNEUPAN003711000
- symbol?: malA
- synonym:
- description?: DUF1189 domain-containing protein
- DUF1189 domain-containing protein
- maltodextrose utilization protein MalA
- putative maltodextrose utilization protein MalA
- malA protein
- HTH-type transcriptional regulator MalR (Maltose operontranscriptional repressor)
- Predicted integral membrane protein
descriptions from strain specific annotations:
- strand?: -
- coordinates?: 4745407..4746207
- occurrence?: in 100% of 41 strains
⊟Orthologs[edit | edit source]
⊟Genome Viewer[edit | edit source]
| TIGR4 | |
| D39 | |
| D39V | |
| Hungary19A-6 | |
| EF3030 |
⊟Alignments[edit | edit source]
- alignment of orthologues: CLUSTAL format alignment by MAFFT L-INS-i (v7.505)
TIGR4 MLPYPFSYFSSIWGVRKPLSKRFELNWFQLLFTSIFLISLSMVPIAIQNSSQETYPLETF
D39 MLPYPFSYFSSIWGFRKPLSKRFELNWFQLLFTSIFLISLSMVPIAIQNSSQETYPLETF
D39V MLPYPFSYFSSIWGFRKPLSKRFELNWFQLLFTSIFLISLSMVPIAIQNSSQETYPLETF
Hungary19A-6 MLPYPFSYFSSIWGFRKPLSKRFGLNWFQLLFTSIFLISLSMVPIAIQNSSQETYPLETF
EF3030 MLPYPFSYFSSIWGFRKPLSKRFELNWFQLLFTSIFLISLSMVPIAIQNSSQETYPLETF
**************.******** ************************************
TIGR4 IDNVYEPLTDKVVQDLSEHATIVDGTLTYTGTASQAPSVVIGPSQIKELPKDLQLHFDTN
D39 IDNVYEPLTDKVVQDLSEHATIVDGTLTYTGTASQAPSVVIGPSQIKELPKDLQLHFDTN
D39V IDNVYEPLTDKVVQDLSEHATIVDGTLTYTGTASQAPSVVIGPSQIKELPKDLQLHFDTN
Hungary19A-6 IDNVYEPLTDEVVQDLSEHARIVDGKLTYTGTANQTPSVVIGPSQSKELPKDLQLHFDTN
EF3030 IDNVYEPLTDKVVQDLSEHATIVDGTLTYTGTASQAPSVVIGPSQIKELPKDLQLHFDTN
**********:********* ****.*******.*:********* **************
TIGR4 ELVISKESKELTRISYRAIQTESFKSKDSLTQAISKDWYQQNRVYISLFLVLGASFLFGL
D39 ELVISKESKELTRISYRAIQTEGFKSKDSLTQAISKDWYQQNRVYISLFLVLGASFLFGL
D39V ELVISKESKELTRISYRAIQTEGFKSKDSLTQAISKDWYQQNRVYISLFLVLGASFLFGL
Hungary19A-6 ELVISKESKELTRVSYRAIETESFKSKDSLTQAISKDWYQQNRVYISLFLVLGASFLFGL
EF3030 ELVISKESKELTRISYRAIQTESFKSKDSLTQAISKDWYQQNRVYISLFLVLGASFLFGL
*************:*****:**.*************************************
TIGR4 NFFIVSLGASFLLYITKRSRLFSFNTFKECYHFILNCLGLPTLITLILGLFGQNMTTLIT
D39 NFFIVSLGASLLLYITKKSRLFSFRTFKECYHFILNCLGLPTLITLILGLFGQNMTTLIT
D39V NFFIVSLGASLLLYITKKSRLFSFRTFKECYHFILNCLGLPTLITLILGLFGQNMTTLIT
Hungary19A-6 NFFIVSLGASLLLYITKKSRLFSFRTFKECYHFILNCLGLPTLITLILGLFGQNMTTLIT
EF3030 NFFIVSLGASFLLYITKRSRLFSFNTFKECYHFILNCLGLPTLITLILGLFGQNMTTLIT
**********:******:******.***********************************
TIGR4 VQNILFVLYLVTIFYKTHFRDPNYHK
D39 VQNILFVLYLVTIFYKTHFRDPNYHK
D39V VQNILFVLYLVTIFYKTHFRDPNYHK
Hungary19A-6 VQNILFVLYLVTIFYKTHFRDPDYHK
EF3030 VQNILFVLYLVTIFYKTHFRDPDYHK
**********************:***