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PangenomeTIGR4
serotype 4
D39serotype 2
D39Vserotype 2
Hungary19A-6serotype 19A
EF3030serotype 19F
670-6Bserotype 6B
6A-10serotype 6A
70585serotype 5
A026serotype 19F
A66serotype 3
AP200serotype 11A
ASP0581serotype 12F
ATCC 49619serotype 19F
ATCC 700669serotype 23F
BM6001serotype 19F
BVJ1JLserotype 1
CGSP14serotype 14
G54serotype 19F
HU-OHserotype 3
Hu15serotype 19A
Hu17serotype 19A
INV104serotype 1
INV200serotype 14
JJAserotype 14
MDRSPN001serotype 19F
NCTC7465serotype 1
NCTC7466serotype 2
NU83127serotype 4
OXC141serotype 3
P1031serotype 1
R6serotype 2
SP49serotype 19A
SPN032672serotype 1
SPN034156serotype 3
SPN034183serotype 3
SPN994038serotype 3
SPN994039serotype 3
SPNA45serotype 3
ST556serotype 19F
TCH8431/19Aserotype 19A
Taiwan19F-14serotype 19F
Xen35serotype 4
gamPNI0373serotype 1
⊟Summary[edit | edit source]
- pan ID?: PNEUPAN003765000
- symbol?: yicL_2
- synonym:
- description?: DMT family transporter
- DMT family transporter
- membrane protein
- putative membrane protein
- putative inner membrane transporter YicL
- drug/metabolite transporter (DMT) superfamily permease
- Conserved hypothetical protein
- EamA family transporter
- multidrug transporter
- Drug/metabolite transporter superfamily permease
- EamA/RhaT family transporter
- membrane protein, putative
- multidrug resistance efflux transporter family protein
- Permease of the drug/metabolite transporter (DMT) superfamily
- Permeases of the drug/metabolite transporter (DMT) superfamily
- putative membrane protein (pseudogene)
- pseudogene
descriptions from strain specific annotations:
- strand?: -
- coordinates?: 4912330..4913241
- occurrence?: in 100% of 43 strains
⊟Orthologs[edit | edit source]
⊟Genome Viewer[edit | edit source]
| TIGR4 | |
| D39 | |
| D39V | |
| Hungary19A-6 | |
| EF3030 |
⊟Alignments[edit | edit source]
- alignment of orthologues: CLUSTAL format alignment by MAFFT L-INS-i (v7.505)
TIGR4 MNQYQKKIVNGKIYSLLSGLIWGICGILGEYFFTHYQVSSGWITSMRLTLAGSLVLIWSA
D39 MNQYQKKIVNGKIYSLLSGLIWGICGILGEYFFTHYQVSSGWITSMRLTLAGSLVLIWSA
D39V MNQYQKKIVNGKIYSLLSGLIWGICGILGEYFFTHYQVSSGWITSMRLTLAGSLVLIWSA
Hungary19A-6 MNQYQKKIVNGKIYSLLSGLIWGICGILGEYFFTHYQVSSGWITSMRLTLAGSLVLIWSA
EF3030 MNQYQKKIVNGKIYSLLSGLIWGICGILGEYFFTHYQVSSGWITSMRLTLAGSLVLIWSA
************************************************************
TIGR4 IQLKSQVLDIWRDKKNYLPFLAYAILGIFSVQYFFYLCVEYSNATTATILQFISPVFILF
D39 IQLKSQVLDIWRDKKNYLPFLAYAILGIFSVQYFFYLCVEYSNATTATILQFISPVFILF
D39V IQLKSQVLDIWRDKKNYLPFLAYAILGIFSVQYFFYLCVEYSNATTATILQFISPVFILF
Hungary19A-6 IQLKSQVLDIWRDKKNYLPFLAYAILGIFSVQYFFYLCVEYSNATTATILQFISPVFILF
EF3030 IQLKSQVLDIWRDKKNYLPFLAYAILGIFSVQYFFYLCVEYSNATTATILQFISPVFILF
************************************************************
TIGR4 YNRLVYQKRASKSAVFYVLVAMLGVCLMATKGDLSQLSMTPLALITGLLSAMGVMFNVIL
D39 YNRLVYQKRASKSAVFYVLVAMLGVCLMATKGDLSQLSMTPLALITGLLSAMGVMFNVIL
D39V YNRLVYQKRASKSAVFYVLVAMLGVCLMATKGDLSQLSMTPLALITGLLSAMGVMFNVIL
Hungary19A-6 YNRLVYQKRASKSAVFYVLVAMLGVCLMATKGDLSQLSMTPLALITGLLSAMGVMFNVIL
EF3030 YNRLVYQKRASKSAVFYVLVAMLGVCLMATKGDLSQLSMTPLALITGLLSAMGVMFNVIL
************************************************************
TIGR4 PQPFAKRYGFVPTVGWGMILAGLFSNVLSPVYQLSFTLDIWSILICLIIAFFGTAFAFFI
D39 PQPFAKRYGFVPTVGWGMILAGLFSNVLSPVYQLSFTLDIWSILICLIIAFFGTAFAFFI
D39V PQPFAKRYGFVPTVGWGMILAGLFSNVLSPVYQLSFTLDIWSILICLIIAFFGTAFAFFI
Hungary19A-6 PQPFAKRYGFVPTVGWGMILAGLFSNVLSPVYQLSFTLDIWSILICLIIAFFGTAFAFFI
EF3030 PQPFAKRYGFVPTVGWGMILAGLFSNVLSPVYQLSFTLDIWSILICLIIAFFGTAFAFFI
************************************************************
TIGR4 SMKAVSLVSPLVVAVISASEPLSSALLSVLFLGLVVDWSLLLAIALIILPMIFLSIEEAK
D39 SMKAVSLVSPLVVAVISASEPLSSALLSVLFLGLVVDWSLLLAIALIILPMIFLSIEEAK
D39V SMKAVSLVSPLVVAVISASEPLSSALLSVLFLGLVVDWSLLLAIALIILPMIFLSIEEAK
Hungary19A-6 SMKAVSLVSPLVVAVISASEPLSSALLSVLFLGLVVDWSLLLAIALIILPMIFLSIEEAK
EF3030 SMKAVSLVSPLVVSVISASEPLSSALLSVLFLGLVVDWSLLLAIALIILPMIFLSIEEAK
*************:**********************************************
TIGR4 ESR
D39 ESR
D39V ESR
Hungary19A-6 ESR
EF3030 ESR
***