PangenomeTIGR4

serotype 4

D39

serotype 2

D39V

serotype 2

Hungary19A-6

serotype 19A

EF3030

serotype 19F

670-6B

serotype 6B

6A-10

serotype 6A

70585

serotype 5

A026

serotype 19F

A66

serotype 3

AP200

serotype 11A

ASP0581

serotype 12F

ATCC 49619

serotype 19F

ATCC 700669

serotype 23F

BM6001

serotype 19F

BVJ1JL

serotype 1

CGSP14

serotype 14

G54

serotype 19F

HU-OH

serotype 3

Hu15

serotype 19A

Hu17

serotype 19A

INV104

serotype 1

INV200

serotype 14

JJA

serotype 14

MDRSPN001

serotype 19F

NCTC7465

serotype 1

NCTC7466

serotype 2

NU83127

serotype 4

OXC141

serotype 3

P1031

serotype 1

R6

serotype 2

SP49

serotype 19A

SPN032672

serotype 1

SPN034156

serotype 3

SPN034183

serotype 3

SPN994038

serotype 3

SPN994039

serotype 3

SPNA45

serotype 3

ST556

serotype 19F

TCH8431/19A

serotype 19A

Taiwan19F-14

serotype 19F

Xen35

serotype 4

gamPNI0373

serotype 1

⊟Summary

• pan ID^?: PNEUPAN003783000
• symbol^?: aspS
• synonym:
• description^?: aspartate--tRNA ligase

  descriptions from strain specific annotations:

  • aspartate--tRNA ligase
  • aspartyl-tRNA synthetase
  • Aspartyl-tRNA synthetase (aspartate-tRNA ligase)
  • aspS
  • Aspartyl-tRNA synthetase (EC 6.1.1.12)
• strand^?: -
• coordinates^?: 4942221..4943984
• occurrence^?: in 100% of 43 strains

⊟Orthologs

(4)^?
TIGR4:
SP_RS10780 (aspS)
(2)
D39:
SPD_RS10285 (aspS)
(2)
D39V:
SPV_RS10285 (aspS)
(19A)
Hungary19A-6:
SPH_RS11290 (aspS)
(19F)
EF3030:
EF3030_RS10440 (aspS)
(6B)^?
670-6B:
SP670_RS11480 (aspS)
(6A)
6A-10:
HKM25_RS10755 (aspS)
(5)
70585:
SP70585_RS11035 (aspS)
(19F)
A026:
T308_RS10300 (aspS)
(3)
A66:
A66_RS09640 (aspS)
(11A)
AP200:
SPAP_RS10695 (aspS)
(12F)
ASP0581:
EL334_RS11035 (aspS)
(19F)
ATCC 49619:
EL263_RS10585 (aspS)
(23F)
ATCC 700669:
SPN23F_RS11025 (aspS)
(19F)
BM6001:
ODS73_RS11385 (aspS)
(1)
BVJ1JL:
JN057_RS10440 (aspS)
(14)
CGSP14:
SPCG_RS11020 (aspS)
(19F)
G54:
SPG_RS10265 (aspS)
(1)
gamPNI0373:
HMPREF1038_RS10455 (aspS)
(3)
HU-OH:
EL271_RS10565 (aspS)
(19A)
Hu15:
SPNHU15_RS10180 (aspS)
(19A)
Hu17:
SPNHU17_RS10165 (aspS)
(1)
INV104:
INV104_RS10700 (aspS)
(14)
INV200:
SPNINV200_RS10445 (aspS)
(14)
JJA:
SPJ_RS10600 (aspS)
(19F)
MDRSPN001:
MDRSPN_RS10125 (aspS)
(1)
NCTC7465:
AT689_RS03290 (aspS)
(2)
NCTC7466:
DQM66_RS10280 (aspS)
(4)
NU83127:
EL277_RS10980 (aspS)
(3)
OXC141:
SPNOXC_RS10355 (aspS)
(1)
P1031:
SPP_RS10700 (aspS)
(2)
R6:
SPR_RS09805 (aspS)
(19A)
SP49:
BMJ42_RS11545 (aspS)
(1)
SPN032672:
SPN032672_RS05145 (aspS)
(3)
SPN034156:
SPN034156_RS05360 (aspS)
(3)
SPN034183:
SPN034183_RS10370 (aspS)
(3)
SPN994038:
SPN994038_RS10280 (aspS)
(3)
SPN994039:
SPN994039_RS10285 (aspS)
(3)
SPNA45:
SPNA45_RS00535 (aspS)
(19F)
ST556:
MYY_RS10725 (aspS)
(19F)
Taiwan19F-14:
SPT_RS10520 (aspS)
(19A)
TCH8431/19A:
HMPREF0837_RS00640 (aspS)
(4)
Xen35:
CXP32_RS10920 (aspS)

⊟Genome Viewer

TIGR4
D39
D39V
Hungary19A-6
EF3030

⊟Alignments

• alignment of orthologues:
  CLUSTAL format alignment by MAFFT L-INS-i (v7.505)
  
  
  TIGR4           MKRSMYAGRVREEHIGQEITLKGWVGRRRDLGGLIFIDLRDREGIMQLVINPEKVSAEVM
  D39             MKRSMYAGRVREEHIGQEITLKGWVGRRRDLGGLIFIDLRDREGIMQLVINPEKVSAEVM
  D39V            MKRSMYAGRVREEHIGQEITLKGWVGRRRDLGGLIFIDLRDREGIMQLVINPEKVSAEVM
  Hungary19A-6    MKRSMYAGRVREEHIGQEITLKGWVGRRRDLGGLIFIDLRDREGIMQLVINPEKVSAEVM
  EF3030          MKRSMYAGRVREEHIGQEITLKGWVGRRRDLGGLIFIDLRDREGIMQLVINPEKVSAEVM
                  ************************************************************
  
  TIGR4           ATAESLRSEFVIEVTGQVAAREQANDKLPTGAVELNVTALIVLNTAKTTPFEIKDGIEAN
  D39             ATAESLRSEFVIEVTGQVAAREQANDKLPTGAVELNVTALIVLNTAKTTPFEIKDGIEAN
  D39V            ATAESLRSEFVIEVTGQVAAREQANDKLPTGAVELNVTALIVLNTAKTTPFEIKDGIEAN
  Hungary19A-6    ATAESLRSEFVIEVTGQVAAREQANDKLPTGAVELNVTALIVLNTAKTTPFEIKDGIEAN
  EF3030          ATAESLRSEFVIEVTGQVAAREQANDKLPTGAVELNVTALIVLNTAKTTPFEIKDGIEAN
                  ************************************************************
  
  TIGR4           DDTRLRYRYLDLRRPEMLENLKLRAKVTHSIRNYLDELEFIDVETPFLSKSTPEGARDYL
  D39             DDTRLRYRYLDLRRPEMLENLKLRAKVTHSIRNYLDELEFIDVETPFLSKSTPEGARDYL
  D39V            DDTRLRYRYLDLRRPEMLENLKLRAKVTHSIRNYLDELEFIDVETPFLSKSTPEGARDYL
  Hungary19A-6    DDTRLRYRYLDLRRPEMLENLKLRAKVTHSIRNYLDELEFIDVETPFLSKSTPEGARDYL
  EF3030          DDTRLRYRYLDLRRPEMLENLKLRAKVTHSIRNYLDELEFIDVETPFLSKSTPEGARDYL
                  ************************************************************
  
  TIGR4           VPSRVNKGHFYALPQSPQITKQLLMNAGFDRYYQIVKCFRDEDLRGDRQPEFTQVDLETS
  D39             VPSRVNKGHFYALPQSPQITKQLLMNAGFDRYYQIVKCFRDEDLRGDRQPEFTQVDLETS
  D39V            VPSRVNKGHFYALPQSPQITKQLLMNAGFDRYYQIVKCFRDEDLRGDRQPEFTQVDLETS
  Hungary19A-6    VPSRVNKGHFYALPQSPQITKQLLMNAGFDRYYQIVKCFRDEDLRGDRQPEFTQVDLETS
  EF3030          VPSRVNKGHFYALPQSPQITKQLLMNAGFDRYYQIVKCFRDEDLRGDRQPEFTQVDLETS
                  ************************************************************
  
  TIGR4           FLTEQEIQDITESLIARVMKETKGIEVTLPFPRMKYDDAMALYGSDKPDTRFDMLLQDLT
  D39             FLTEQEIQDITEGLIARVMKETKDIEVTLPFPRMKYDDAMALYGSDKPDTRFDMLLQDLT
  D39V            FLTEQEIQDITEGLIARVMKETKDIEVTLPFPRMKYDDAMALYGSDKPDTRFDMLLQDLT
  Hungary19A-6    FLTEQEIQDITEGLIARVMKETKGIEVTLPFPRMKYDDAMALYGSDKPDTRFDMLLQDLT
  EF3030          FLTEQEIQDITEGLIARVMKETKGIEVTLPFPRMKYDDAMALYGSDKPDTRFDMLLQDLT
                  ************.**********.************************************
  
  TIGR4           EVVRGVDFKVFSEAPAVKAIVVTGAADNYSRKDIDKMTEVAKQYGAKGLAWVKVVDGELN
  D39             EVVKGVDFKVFSEALAVKAIVVKGAADNYSRKDIDKMTEVAKQYGAKGLAWVKVVDGELN
  D39V            EVVKGVDFKVFSEALAVKAIVVKGAADNYSRKDIDKMTEVAKQYGAKGLAWVKVVDGELN
  Hungary19A-6    EVVKGVDFKVFSEAPAVKAIVVKGAADNYSRKDIDKMTEVAKQYGAKGLAWVKVVDGELN
  EF3030          EVVKGVDFKVFSEAPAVKAIVVKGAADNYSRKDIDKMTEVAKQYGAKGLAWVKVVDGELN
                  ***:********** *******.*************************************
  
  TIGR4           GPVAKFLTGIQEELTTALVLEDKDLVLFVADTLEVANATLGALRGRIAKELGLIDNDKFN
  D39             GPVAKFLTGIQEELTTALALEDKDLVLFVADTLEVANATLGALRGRIAKELGLIDNDKFN
  D39V            GPVAKFLTGIQEELTTALALEDKDLVLFVADTLEVANATLGALRGRIAKELGLIDNDKFN
  Hungary19A-6    GPVAKFLTSIQAELTTALSLEDKDLVLFVADTLEVANATLGALRGRIAKELGLIDNDKFN
  EF3030          GPVAKFLTGIQEELTTALALEDKDLVLFVADTLEVANATLGALRGRIAKELGLIDNDKFN
                  ********.** ****** *****************************************
  
  TIGR4           FLWVVDWPMFEWSEEEGRYMSAHHPFTLPQEETAHELEGDLAKVRAIAYDIVLNGYELGG
  D39             FLWVVDWPMFEWSEEEGRYMSAHHPFTLPQEETAHELEGDLAKVRAIAYDIVLNGYELGG
  D39V            FLWVVDWPMFEWSEEEGRYMSAHHPFTLPQEETAHELEGDLAKVRAIAYDIVLNGYELGG
  Hungary19A-6    FLWVVDWPMFEWSEEEGRYMSAHHPFTLPQEETAHELEGDLAKVRAIAYDIVLNGYELGG
  EF3030          FLWVVDWPMFEWSEEEGRYMSAHHPFTLPQEETAHELEGDLAKVRAIAYDIVLNGYELGG
                  ************************************************************
  
  TIGR4           GSLRINQKDLQERMFKALGFSTEEANDQFGFLLEAMDYGFPPHGGLAIGLDRFVMLLAGE
  D39             GSLRINQKDLQERMFKALGFSAEEANDQFGFLLEAMDYGFPPHGGLAIGLDRFVMLLAGE
  D39V            GSLRINQKDLQERMFKALGFSAEEANDQFGFLLEAMDYGFPPHGGLAIGLDRFVMLLAGE
  Hungary19A-6    GSLRINQKDLQERMFKALGFSAEEANDQFGFLLEAMDYGFPPHGGLAIGLDRFVMLLAGE
  EF3030          GSLRINQKDLQERMFKALGFSTEEANDQFGFLLEAMDYGFPPHGGLAIGLDRFVMLLAGE
                  *********************:**************************************
  
  TIGR4           ENIREVIAFPKNNKATDPMTQAPSTVALKQLEELSLQVEEDETNKTN
  D39             ENIREVIAFPKNNKATDPMTQAPSTVALKQLEELSLQVEEDETSKTN
  D39V            ENIREVIAFPKNNKATDPMTQAPSTVALKQLEELSLQVEEDETSKTN
  Hungary19A-6    ENIREVIAFPKNNKASDPMTQAPSTVALKQLEELSLQVEEDETSKTN
  EF3030          ENIREVIAFPKNNKATDPMTQAPSTVALKQLEELSLQVEEDETSKTN
                  ***************:***************************.***