Jump to navigation
Jump to search
PangenomeTIGR4
serotype 4
D39serotype 2
D39Vserotype 2
Hungary19A-6serotype 19A
EF3030serotype 19F
670-6Bserotype 6B
6A-10serotype 6A
70585serotype 5
A026serotype 19F
A66serotype 3
AP200serotype 11A
ASP0581serotype 12F
ATCC 49619serotype 19F
ATCC 700669serotype 23F
BVJ1JLserotype 1
CGSP14serotype 14
G54serotype 19F
HU-OHserotype 3
Hu15serotype 19A
Hu17serotype 19A
INV104serotype 1
INV200serotype 14
JJAserotype 14
MDRSPN001serotype 19F
NCTC7466serotype 2
NU83127serotype 4
OXC141serotype 3
P1031serotype 1
R6serotype 2
SP49serotype 19A
SPN032672serotype 1
SPN034156serotype 3
SPN034183serotype 3
SPN994038serotype 3
SPN994039serotype 3
SPNA45serotype 3
ST556serotype 19F
TCH8431/19Aserotype 19A
Taiwan19F-14serotype 19F
Xen35serotype 4
gamPNI0373serotype 1
⊟Summary[edit | edit source]
- pan ID?: PNEUPAN003796000
- symbol?: —
- synonym:
- description?: glutamyl-tRNA synthetase
- glutamyl-tRNA synthetase
- putative uncharacterized protein
- conserved hypothetical protein
- Gamma-glutamylcysteine synthetase
- glutamate--cysteine ligase
- gamma-glutamylcysteine synthetase putative
- putative glutamyl-tRNA synthetase
- pseudogene
descriptions from strain specific annotations:
- strand?: +
- coordinates?: 4861039..4861851
- occurrence?: in 100% of 41 strains
⊟Orthologs[edit | edit source]
⊟Genome Viewer[edit | edit source]
| TIGR4 | |
| D39 | |
| D39V | |
| Hungary19A-6 | |
| EF3030 |
⊟Alignments[edit | edit source]
- alignment of orthologues: CLUSTAL format alignment by MAFFT L-INS-i (v7.505)
TIGR4 MSCSIDLLKHRYLKNIKENPELFVGIELEYPVASLEGDATDVEVMKDLFHYLVSTLDLTV
D39 MSCSIDLLKHRYLKNIKENPELFVGIELEYPVASLEGDATDVEVIKDLFHYLVSTLDLTV
D39V MSCSIDLLKHRYLKNIKENPELFVGIELEYPVASLEGDATDVEVIKDLFHYLVSTLDLTV
Hungary19A-6 MSCSIDLLKHRYLKNIKENPELFVGIELEYPVASLEGDATDVEVIKDLFHYLVSTLDLTV
EF3030 MSCSIDLLKHRYLKNIKENPELFVGIELEYPVASLEGDATDVEVIKDLFHYLVSTLDLTV
********************************************:***************
TIGR4 AKVDDFGNLIQLVDPISQDAILFEVSYTTIEFAFGKAETIQEVENRFNNYMNVIQRKLAE
D39 AKVDDFGNLIQLVDPISQDAILFEVSYTTIEFAFGKAETIQEVENRFNNYMNVIQRKLAE
D39V AKVDDFGNLIQLVDPISQDAILFEVSYTTIEFAFGKAETIQEVENRFNNYMNVIQRKLAE
Hungary19A-6 AKVDDFGNLIQLVDPISQDAILFEVSYTTIEFAFGKAETIQEVENRFNNYMNVIQRKLAE
EF3030 AKVDDFGNLIQLVDPISQDAILFEVSYTTIEFAFGKAETIQEVENRFNNYMNVIQRKLAE
************************************************************
TIGR4 SNHAIVGCGIHPNWDKNENCPVAYPRYQMLMDYLNLSRNIIKSDLHHFPEYGTFICGSQV
D39 SNHAIVGCGIHPNWDKNENCPVAYPRYQMLMDYLNLSRNIIKSDLHHFPEYGTFICGSQV
D39V SNHAIVGCGIHPNWDKNENCPVAYPRYQMLMDYLNLSRNIIKSDLHHFPEYGTFICGSQV
Hungary19A-6 SNHAIVGCGIHPNWDKNENCPVAYPRYQMLMDYLNLSRNIIKSDLHHFPEYGTFICGSQV
EF3030 SNHAIVGCGIHPNWDKNENCPVAYPRYQMLMDYLNLSRNIIKSDLHHFPEYGTFICGSQV
************************************************************
TIGR4 QLDISKTNYLRVINAFTQIEAAKAYLFANSEFSGADWDTKISRDIFWEESMHGIYPENVG
D39 QLDISKTNYLRVINAFTQIEAAKAYLFANSEFSGADWDTKISRDIFWEESMHGIYPENVG
D39V QLDISKTNYLRVINAFTQIEAAKAYLFANSEFSGADWDTKISRDIFWEESMHGIYPENVG
Hungary19A-6 QLDISKTNYLRVINAFTQIEAAKAYLFANSEFSGADWDTKISRDIFWEESMHGIYPENVG
EF3030 QLDISKTNYLRVINAFTQIEAAKAYLFANSEFSGADWDTKISRDIFWEESMHGIYPENVG
************************************************************
TIGR4 VNARLLNDETDFFDYLNHSAIFTAERDGQTYYFYPIQAGDYLATSEIQAFALNGDEVIIY
D39 VNARLLNDEADFFDYLNHSAIFTAERDGQTYYFYPIQAGDYLATPEIQAFALNGDEVIIY
D39V VNARLLNDEADFFDYLNHSAIFTAERDGQTYYFYPIQAGDYLATPEIQAFALNGDEVIIY
Hungary19A-6 VNARLLNDEADFFDYLNHSAIFTAERDGQTYYFYPIQAGDYLATPEIQAFALNGDEVIIS
EF3030 VNARLLNDEADFFDYLNHSAIFTAERDGQTYYFYPIQAGDYLATPEIQAFALNGDEVIIY
*********:**********************************.**************
TIGR4 PQEKDFETHRSYQYQDLTTRGTVEFRSVCTQPLDRTFASAAFHLGLLVNLDKLEAYLETA
D39 PQEKDFETHRSYQYQDLTTRGTVEFRSVCTQPLDRTFASAAFHLGLLVNLDKLEAYLETA
D39V PQEKDFETHRSYQYQDLTTRGTVEFRSVCTQPLDRTFASAAFHLGLLVNLDKLEAYLETA
Hungary19A-6 PQEKDFETHRSYQYQDLTTRGTVEFRSVCTQPLDRTFASAAFHLGLLVNLDKLEAYLETA
EF3030 PQEKDFETHRSYQYQDLTTRGTVEFRSVCTQPLDRTFASAAFHLGLLVNLDKLEAYLETA
************************************************************
TIGR4 PFFKVFGYDYKSLRRQFSKKNLTDEEETTIIEFSKDLLLLAEEGLVVRNKEEMTYLQPLR
D39 PFFKVFGYDYKFLRRQFSKKNLTDEEETMIIEFSKDLLLLAEEGLVVRNKEEMTYLQPLR
D39V PFFKVFGYDYKFLRRQFSKKNLTDEEETMIIEFSKDLLLLAEEGLVVRNKEEMTYLQPLR
Hungary19A-6 PFFKVFGYDYKFLRRQFSKKNLTDEEETTIIEFSKDLLLLAEEGLVVRNKEEMTYLQPLR
EF3030 PFFKVFGYDYKSLRRQFSKKNLTDEEETMIIEFSKDLLLLAEEGLVVRNKEEMTYLQPLR
*********** **************** *******************************
TIGR4 EELSL
D39 EELSL
D39V EELSL
Hungary19A-6 EELSL
EF3030 EELSL
*****