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PangenomeTIGR4
serotype 4
D39serotype 2
D39Vserotype 2
Hungary19A-6serotype 19A
EF3030serotype 19F
670-6Bserotype 6B
6A-10serotype 6A
70585serotype 5
A026serotype 19F
A66serotype 3
AP200serotype 11A
ASP0581serotype 12F
ATCC 49619serotype 19F
ATCC 700669serotype 23F
BVJ1JLserotype 1
CGSP14serotype 14
G54serotype 19F
HU-OHserotype 3
Hu15serotype 19A
Hu17serotype 19A
INV104serotype 1
INV200serotype 14
JJAserotype 14
MDRSPN001serotype 19F
NCTC7466serotype 2
NU83127serotype 4
OXC141serotype 3
P1031serotype 1
R6serotype 2
SP49serotype 19A
SPN032672serotype 1
SPN034156serotype 3
SPN034183serotype 3
SPN994038serotype 3
SPN994039serotype 3
SPNA45serotype 3
ST556serotype 19F
TCH8431/19Aserotype 19A
Taiwan19F-14serotype 19F
Xen35serotype 4
gamPNI0373serotype 1
⊟Summary[edit | edit source]
- pan ID?: PNEUPAN003830000
- symbol?: fucY
- synonym:
- description?: glycoside hydrolase family 95 protein
- glycoside hydrolase family 95 protein
- large secreted protein
- conserved hypothetical protein
- Putative large secreted protein
- conserved hypothetical membrane protein
- putative alpha-L-fucosidase
descriptions from strain specific annotations:
- strand?: -
- coordinates?: 4911621..4918461
- occurrence?: in 66% of 41 strains
⊟Orthologs[edit | edit source]
BVJ1JL:
—
CGSP14:
—
G54:
—
⊟Genome Viewer[edit | edit source]
| TIGR4 | |
| D39 | |
| D39V | |
| Hungary19A-6 |
⊟Alignments[edit | edit source]
- alignment of orthologues: CLUSTAL format alignment by MAFFT L-INS-i (v7.505)
TIGR4 MKLWYKKAAANWNEALPIGNGHLGGMIYGSATKECIQLNDETIWYRGKSDRNNPDSLLHL
D39 MKLWYKKAASNWNEALPIGNGHLGGMIYGSATKECIQLNDETIWYRGKSDRNNPDSLLHL
D39V MKLWYKKAASNWNEALPIGNGHLGGMIYGSATKECIQLNDETIWYRGKSDRNNPDSLLHL
Hungary19A-6 MKLWYKKAAANWNEALPIGNGHLGGMIYGSATKECIQLNDETIWYRGKSDRNNPDSLLHL
*********:**************************************************
TIGR4 KKIREYLLDGEIQKAEELIKLTVFATPRDQSHYELLGELYIEHIDIQSCALSLYERELDL
D39 KKIREYLLDGEIQKAEELIKLTMFATPRDQSHYELLGELYIEHIDIQSCALSLYERELDL
D39V KKIREYLLDGEIQKAEELIKLTMFATPRDQSHYELLGELYIEHIDIQSCALSLYERELDL
Hungary19A-6 KKIREYLLDGEIQKAEELIKLTMFATPRDQSHYELLGELYIEHIDIQSCALSLYERELDL
**********************:*************************************
TIGR4 DTAISNVVFEPNSCNLQIKREYFTSFNKNILCCRIVSSVQNTLNLNINLGRNKRFNDEVS
D39 DTAISNVVFEPNSCNLQIKREYFTSFNKNILCCRIVSSVQNTLNLNINLGRNKRFNDEVS
D39V DTAISNVVFEPNSCNLQIKREYFTSFNKNILCCRIVSSVQNTLNLNINLGRNKRFNDEVS
Hungary19A-6 DTAISNVVFEPNSCNLQIKREYFTSFNKNILCCRIVSSVQNTLNLNINLGRNKRFNDEVS
************************************************************
TIGR4 KLDSSTILMSASAGGRKGVQFKVVCHSKVTDGEVSVLGETIVIRNATEVFLYLKSMTDYW
D39 KLDSSTILMSASAGGRKGVQFKVVCHSKVTDGEVSVLGETIVIRNATEVFLYLKSMTDYW
D39V KLDSSTILMSASAGGRKGVQFKVVCHSKVTDGEVSVLGETIVIRNATEVFLYLKSMTDYW
Hungary19A-6 KLDSSTILMSASAGGRKGVQFKVVCHSKVTDGEVSVLGETIVIRNATEVFLYLKSMTDYW
************************************************************
TIGR4 GNIDISSLQGEFSSIDYFTEKDEHVKKYQEQFNRVDFKLDYSKGCLSIPTNLLLENTKKY
D39 GNIDISSLQGEFSSIDYFTEKDEHVKKYQEQFNRVDFKLDYSKDCLSIPTNLLLENTKKY
D39V GNIDISSLQGEFSSIDYFTEKDEHVKKYQEQFNRVDFKLDYSKDCLSIPTNLLLENTKKY
Hungary19A-6 GNIDISSLQGEFSSIDYFTEKDEHVKKYQEQFNRVDFKLDYSKGCLSIPTNLLLENTKKY
*******************************************.****************
TIGR4 SNYLTNLLFHYGRYLLISSSQPNGLPANLQGIWCDELNPIWGSKYTININTQMNYWMVGP
D39 SNYLTNLLFHYGRYLLISSSQPNGLPANLQGIWCDELNPIWGSKYTININTQMNYWMVGP
D39V SNYLTNLLFHYGRYLLISSSQPNGLPANLQGIWCDELNPIWGSKYTININTQMNYWMVGP
Hungary19A-6 SNYLTNLLFHYGRYLLISSSQPNGLPANLQGIWCDELNPIWGSKYTININTQMNYWIVGP
********************************************************:***
TIGR4 CDLPEVEYPLFDMLERMREPGRLTAKKMYGARGFTAHHNTDGFGDTAPQSHAMGAAIWVL
D39 CDLPEVEYPLFDMLERMREPGRLTAKKMYGARGFTAHHNTDGFGDTAPQSHAMGAAIWVL
D39V CDLPEVEYPLFDMLERMREPGRLTAKKMYGARGFTAHHNTDGFGDTAPQSHAMGAAIWVL
Hungary19A-6 CDLPEVEYPLFDMLERMREPGRLTAKKMYGARGFTAHHNTDGFGDTAPQSHAMGAAIWVL
************************************************************
TIGR4 TIPWLCTHIWEHYLYFQDERILTEHFEMIKEAFLFFEDYLFEVDGYLMTGPSVSPENKYR
D39 TIPWLCTHIWEHYLYFQDERILTEHFEMIKEAFLFFEDYLFEVDGYLMTGPSVSPENKYR
D39V TIPWLCTHIWEHYLYFQDERILTEHFEMIKEAFLFFEDYLFEVDGYLMTGPSVSPENKYR
Hungary19A-6 TIPWLCTHIWEHYLYFQDERILTEHFEMIKEAFLFFEDYLFEVDGYLMTGPSVSPENKYR
************************************************************
TIGR4 LKNGIEGNACLSSTIDNQILRYFCDSCIGIAKQLGDNSDFISRVKELKKKLPKTKIGSNG
D39 LKNGIEGNACLSSTIDNQILRYFCDSCIGIAKQLGDNSDFISRVKELKKKLPKTKIGSNG
D39V LKNGIEGNACLSSTIDNQILRYFCDSCIGIAKQLGDNSDFISRVKELKKKLPKTKIGSNG
Hungary19A-6 LKNGIEGNACLSSTIDNQILRYFCDSCIGIAKQLGDNSDFISRVKELKKKLPKTKIGSNG
************************************************************
TIGR4 QIQEWLEDYEEVEPGHRHISPLFGLYPYNEIDIHKTPELAEAAKITINRRLSNANFLSSQ
D39 QIQEWLEDYEEVEPGHRHISPLFGLYPYNEIDIHKTPELAEAAKITINRRLSNANFLSSQ
D39V QIQEWLEDYEEVEPGHRHISPLFGLYPYNEIDIHKTPELAEAAKITINRRLSNANFLSSQ
Hungary19A-6 QIQEWLEDYEEVEPGHRHISPLFGLYPYNEIDIHKTPELAEAAKITINRRLSNANFLSSQ
************************************************************
TIGR4 EREQAINNWLVSGLHASTQTGWSAAWLIHFFARLYQGEPAYNQINGLLNNATLGNLFLDH
D39 EREQAINNWLVSGLHASTQTGWSAAWLIHFFARLYQGEPAYNQINGLLNNATLGNLFLDH
D39V EREQAINNWLVSGLHASTQTGWSAAWLIHFFARLYQGEPAYNQINGLLNNATLGNLFLDH
Hungary19A-6 EREQAINNWLVSGLHASTQTGWSAAWLIHFFARLYQGEPAYNQINGLLNNATLGNLFLDH
************************************************************
TIGR4 PPFQIDGNLGLVSGICELLVQSHHNWLSLIPALPSAWSEGEVKGFRVRGGYKVSFAWKNG
D39 PPFQIDGNLGLVSGICELLVQSHHNWLSLIPALPSAWSEGEVKGFRVRGGYKVSFAWKNG
D39V PPFQIDGNLGLVSGICELLVQSHHNWLSLIPALPSAWSEGEVKGFRVRGGYKVSFAWKNG
Hungary19A-6 PPFQIDGNLGLVSGICELLVQSHHNWLSLIPALPSAWSEGEVKGFRVRGGYKVSFAWKNG
************************************************************
TIGR4 DITFLKLEGGNKDQKVRVRIYGKNTDVQNIELVFNSEKIIELNF
D39 DITFLKLEGGNKDQKVRVRIYGKNTDVQNIELVFNSEKIIELNF
D39V DITFLKLEGGNKDQKVRVRIYGKNTDVQNIELVFNSEKIIELNF
Hungary19A-6 DITFLKLEGGNKDQKVRVRIYGKNTDVQNIELVFNSEKIIELNF
********************************************