Jump to navigation
Jump to search
PangenomeTIGR4
serotype 4
D39serotype 2
D39Vserotype 2
Hungary19A-6serotype 19A
EF3030serotype 19F
670-6Bserotype 6B
6A-10serotype 6A
70585serotype 5
A026serotype 19F
A66serotype 3
AP200serotype 11A
ASP0581serotype 12F
ATCC 49619serotype 19F
ATCC 700669serotype 23F
BM6001serotype 19F
BVJ1JLserotype 1
CGSP14serotype 14
G54serotype 19F
HU-OHserotype 3
Hu15serotype 19A
Hu17serotype 19A
INV104serotype 1
INV200serotype 14
JJAserotype 14
MDRSPN001serotype 19F
NCTC7465serotype 1
NCTC7466serotype 2
NU83127serotype 4
OXC141serotype 3
P1031serotype 1
R6serotype 2
SP49serotype 19A
SPN032672serotype 1
SPN034156serotype 3
SPN034183serotype 3
SPN994038serotype 3
SPN994039serotype 3
SPNA45serotype 3
ST556serotype 19F
TCH8431/19Aserotype 19A
Taiwan19F-14serotype 19F
Xen35serotype 4
gamPNI0373serotype 1
⊟Summary[edit | edit source]
- pan ID?: PNEUPAN003830000
- symbol?: mngB
- synonym:
- description?: alpha-mannosidase
- alpha-mannosidase
- putative glycosyl hydrolase
- glycosyl hydrolase, family 38
- Mannosylglycerate hydrolase
- conserved hypothetical protein
- sugar hydrolase
- glycosyl hydrolase family 38 N-terminal domain protein
- glycosyl hydrolase-related protein
descriptions from strain specific annotations:
- strand?: -
- coordinates?: 4996836..4999481
- occurrence?: in 100% of 43 strains
⊟Orthologs[edit | edit source]
⊟Genome Viewer[edit | edit source]
| TIGR4 | |
| D39 | |
| D39V | |
| Hungary19A-6 | |
| EF3030 |
⊟Alignments[edit | edit source]
- alignment of orthologues: CLUSTAL format alignment by MAFFT L-INS-i (v7.505)
TIGR4 MENVVVHIISHSHWDREWYLPFESHRMQLVELFDNLFDLFENDPEFKSFHLDGQTIVLDD
D39 MENVVVHIISHSHWDREWYLPFESHRMQLVELFDNLFDLFENDPEFKSFHLDGQTIVLDD
D39V MENVVVHIISHSHWDREWYLPFESHRMQLVELFDNLFDLFENDPEFKSFHLDGQTIVLDD
Hungary19A-6 MENVVVHIISHSHWDREWYLPFESHRMQLVELFDN---LFENDPEFKSFHLDGQTIVLDD
EF3030 MENVVVHIISHSHWDREWYLPFESHRMQLVELFDNLFELFENDPEFKSFHLDGQTIVLDD
*********************************** **********************
TIGR4 YLQIRPENRDKVQRYIDEGKLKIGPFYILQDDYLISSEANVRNTLIGQQEAAKWGKSTQI
D39 YLQIRPENRDKVQRYIDEGKLKIGPFYILQDDYLISSEANVRNTLIGQQEAAKWGKSTQI
D39V YLQIRPENRDKVQRYIDEGKLKIGPFYILQDDYLISSEANVRNTLIGQQEAAKWGKSTQI
Hungary19A-6 YLEIRPENRDKVQRYIDEGKLKIGPFYILQDDYLISSEANVRNTLIGQAECAKWGKSTQI
EF3030 YLQIRPENRDKVQRYIDEGKLKIGPFYILQDDYLISSEANVRNTLIGQQEAAKWGKSTQI
**:********************************************* *.*********
TIGR4 GYFPDTFGNMGQAPQILQKSGIHVAAFGRGVKPIGFDNQVLEDEQFTSQFSEMYWQGVDG
D39 GYFPDTFGNMGQAPQILQKSGIHVAAFGRGVKPIGFDNQVLEDEQFTSQFSEMYWQGVDG
D39V GYFPDTFGNMGQAPQILQKSGIHVAAFGRGVKPIGFDNQVLEDEQFTSQFSEMYWQGVDG
Hungary19A-6 GYFPDTFGNMGQAPQILQKSGIHVAAFGRGVKPIGFDNQVLEDEQFTSQFSEMYWQGADG
EF3030 GYFPDTFGNMGQAPQILQKSGIHVAAFGRGVKPIGFDNQVLEDEQFTSQFSEMYWQGVDG
*********************************************************.**
TIGR4 SRVLGILFANWYSNGNEIPVDKDEALTFWKQKLSDVRAYASTNQWLMMNGCDHQPVQKNL
D39 SRVLGILFANWYSNGNEIPVDKDEALTFWKQKLSDVRAYASTNQWLMMNGCDHQPVQKNL
D39V SRVLGILFANWYSNGNEIPVDKDEALTFWKQKLSDVRAYASTNQWLMMNGCDHQPVQKNL
Hungary19A-6 SRVLGILFANWYSNGNEIPVDKDEALTFWKQKLADVRDYASTNQWLMMNGCDHQPVQKNL
EF3030 SRVLGILFANWYSNGNEIPVDKDEALTFWKQKLSDVRAYASTNQWLMMNGCDHQPVQKNL
*********************************:*** **********************
TIGR4 SEAIRVANELFPDVIFVHSSFDEYVQAVEGALPEHLSTVTGELTSQETDGWYTLANTSSS
D39 SEAIRVANELFPDVIFVHSSFDEYVQAVEGALPEHLSTVTGELTSQETDGWYTLANTSSS
D39V SEAIRVANELFPDVIFVHSSFDEYVQAVEGALPEHLSTVTGELTSQETDGWYTLANTSSS
Hungary19A-6 SEAIRVANELFPDVTFVHSSFDEYVQAVEGALPEHLSTVTGELTSQETDGWYTLANTSSS
EF3030 SEAIRVANELFPDVIFVHSSFDEYVQAVEGALPELLSTVTGELTSQETDGWYTLANTSSS
************** ******************* *************************
TIGR4 RIYLKQAFQENSNLLEQVVEPLTIITGGHNHKDQLTYAWKTLLQNAPHDSICGCSVDEVH
D39 RIYLKQAFQENSNLLEQVVEPLTIITGGHNHKDQLTYAWKTLLQNAPHDSICGCSVDEVH
D39V RIYLKQAFQENSNLLEQVVEPLTIITGGHNHKDQLTYAWKTLLQNAPHDSICGCSVDEVH
Hungary19A-6 RIYLKQAFQENSNLLEQVVEPLTIITGGHNHKDQLTYAWKTLLQNAPHDSICGCSVDEVH
EF3030 RIYLKQAFQENSNLLEQVVEPLTIITGGHNHKDQLTYAWKTLLQNAPHDSICGCSVDEVH
************************************************************
TIGR4 REMETRFAKVNQVGNFVKSNLLNEWKGKIATDKAQSDYLFTVINTGLHDKVDTVSTVIDV
D39 REMETRFAKVNQVGNFVKSNLLNEWKGKIATDKAQSDYLFTVINTGLHDKVDTVCTVIDV
D39V REMETRFAKVNQVGNFVKSNLLNEWKGKIATDKAQSDYLFTVINTGLHDKVDTVCTVIDV
Hungary19A-6 REMETRFAKVNQVGTFVKSNLLNEWKGKIATSKAQSDYLFTVINTGLHDKVDTVSTVIDV
EF3030 REMETRFAKVNQVGNFVKSNLLNEWKGKIATDKAQSDYLFTVINTGLHDKVDTVSTVIDV
**************.****************.**********************.*****
TIGR4 ATCDFKELHPTEGYKKMAALILPSYRVEDLDGRPVEATIEDLGANFEYNLPKDKFRQARI
D39 ATCDFKELHPTEGYKKMAALILPSYRVEDLDGRPVEATIEDLGANFEYDLPKDKFRQARI
D39V ATCDFKELHPTEGYKKMAALILPSYRVEDLDGRPVEATIEDLGANFEYDLPKDKFRQARI
Hungary19A-6 ATCDFKELHPTEGYKKMAALTLPSYRVEDLDGRPVEAKIEDLGANFEYDLPKDKFRQARI
EF3030 ATCDFKELHPTEGYKKMAALILPSYRVEDLDGRPVEATIEDLGANFEYDLPKDKFRQARI
******************** ****************.**********:***********
TIGR4 ARQVRVTIPVHLAPLSWTTFQLLEGKQEHREGIYQNGVIDTPFVTVSVDDNITVYDKTTH
D39 ARQVRVTIPVHLAPLSWTTFQLLEGEQEHREGIYQNGVIDTPFVTVSVDDNITVYDKTTH
D39V ARQVRVTIPVHLAPLSWTTFQLLEGEQEHREGIYQNGVIDTPFVTVSVDDNITVYDKTTH
Hungary19A-6 ARQVRVTIPVHLAPLSWTTFQLLEGEQEHRDGIYQNGVIDTPFVTVSVDDNITVYDKTTH
EF3030 ARQVRVTIPVHLAPLSWTTLQLLEGKQEHREGIYQNGVIDTPFVTVSVDDNITVYDKTTH
*******************:*****:****:*****************************
TIGR4 EAYEDFIRFEDRGDIGNEYIYFQPKGTEPIFAELKGHEVLENTACYAKILLKHELTVPVS
D39 EAYEDFIRFEDRGDIGNEYIYFQPKGTEPIFAELKDHEVLENTDRYAKILLKHELTVPVS
D39V EAYEDFIRFEDRGDIGNEYIYFQPKGTEPIFAELKDHEVLENTDRYAKILLKHELTVPVS
Hungary19A-6 EAYEDFIRFEDRGDIGNEYIYFQPKGTEPIYAELKGYEVLENTARYAKILLKHELTVPVS
EF3030 EAYEDFIRFEDRGDIGNEYIYFQPKGTEPIFAELKGHEVLENTACYAKILLKHELTVPVS
******************************:****.:****** ***************
TIGR4 ADEKLEEEQQGIIEFMKREAGRSEELTNIPLETELTVFVDNPQIRFKTRFTNTAKDHRIR
D39 ADEKLEEEQQGIIEFMKREAGRSEELTNIPLETELTVFVDNPQIRFKTRFTNTAKDHRIR
D39V ADEKLEEEQQGIIEFMKREAGRSEELTNIPLETELTVFVDNPQIRFKTRFTNTAKDHRIR
Hungary19A-6 ADEKLEEEQQGIIEFMKREAGRSEELTNIPLETELTVFVDNPQIRFKTRFTNTAKDHRIR
EF3030 ADEKLEEEQQGIIEFMKREAGRSEELTNIPLETELIVFVDNPQIRFKTRFTNTAKDHRIR
*********************************** ************************
TIGR4 LLVKTHNTRPSNDSESIYEVVTRPNKPAASWENPENPQHQQAFVSLYDDEKGVTVSNKGL
D39 LLVKTHNTRPSNDSESIYEVVTRPNKPAASWENPENPQHQQAFVSLYDDEKGVTVSNKGL
D39V LLVKTHNTRPSNDSESIYEVVTRPNKPAASWENPENPQHQQAFVSLYDDEKGVTVSNKGL
Hungary19A-6 LLVKTHNTRPSNDSESIYEVVTRPNKPAASWENPENPQHQQAFVSLYDDEKGVTVSNKGL
EF3030 LLVKTHNTRPSNDSESIYEVVTRPNKPAASWENPENPQHQQAFVSLYDDEKGVTVSNKGL
************************************************************
TIGR4 NEYEILGDNTIAVTILRASGELGDWGYFPTPEAQCLREFEVEFALECHQAQERFSAYRRA
D39 NEYEILGDNTIAVTILRASGELGDWGYFPTPEAQCLREFEVEFALECHQAQERFSAYRRA
D39V NEYEILGDNTIAVTILRASGELGDWGYFPTPEAQCLREFEVEFALECHQAQERFSAYRRA
Hungary19A-6 NEYEILGDNTIAVTILRASGELGDWGYFPTPEAQCLREFEVEFALECHQAQERFSAYRRA
EF3030 NEYEILGDNTIAVTILRASGELGDWGYFPTPEAQCLREFEVEFAIECHQAQERFSAYRRA
********************************************:***************
TIGR4 KALQTPFTSLQLARQEGSVVATGSLLSHSVLSIPQVCPTAFKVAENEEGYVLRYYNMCSE
D39 KALQTPFTSLQLARQEGSVVATGSLLSHSVLSIPQVCPTAFKVAENEEGYVLRYYNMCSE
D39V KALQTPFTSLQLARQEGSVVATGSLLSHSVLSIPQVCPTAFKVAENEEGYVLRYYNMCSE
Hungary19A-6 KALQTPFTSLQLARQEGSVVATGSLLSHSVLSIPQVCPTAFKVAENEEGYVLRYYNMSQE
EF3030 KALQTPFTSLQLARQEGSVVATGSLLSHSVLSIPQVCPTAFKVAENEEGYVLRYYNMSQE
*********************************************************..*
TIGR4 NVRVPESQHLFLDLLERPYPVHSGLLAPQEIRTEFIKKEEI
D39 NVRVPESQHLFLDLLERPYPVHSGLLAPQEIRTEFIKKEEI
D39V NVRVPESQHLFLDLLERPYPVHSGLLAPQEIRTEFIKKEEI
Hungary19A-6 NVRISEHQQTILDLLERPYPVHSGLLAPQEIRTEFIKKEEI
EF3030 NVRISEHQQTILDLLERPYPVHSGLLAPQEIRTEFIKKEEI
***:.* *: :******************************