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PangenomeTIGR4
serotype 4
D39serotype 2
D39Vserotype 2
Hungary19A-6serotype 19A
EF3030serotype 19F
670-6Bserotype 6B
6A-10serotype 6A
70585serotype 5
A026serotype 19F
A66serotype 3
AP200serotype 11A
ASP0581serotype 12F
ATCC 49619serotype 19F
ATCC 700669serotype 23F
BM6001serotype 19F
BVJ1JLserotype 1
CGSP14serotype 14
G54serotype 19F
HU-OHserotype 3
Hu15serotype 19A
Hu17serotype 19A
INV104serotype 1
INV200serotype 14
JJAserotype 14
MDRSPN001serotype 19F
NCTC7465serotype 1
NCTC7466serotype 2
NU83127serotype 4
OXC141serotype 3
P1031serotype 1
R6serotype 2
SP49serotype 19A
SPN032672serotype 1
SPN034156serotype 3
SPN034183serotype 3
SPN994038serotype 3
SPN994039serotype 3
SPNA45serotype 3
ST556serotype 19F
TCH8431/19Aserotype 19A
Taiwan19F-14serotype 19F
Xen35serotype 4
gamPNI0373serotype 1
⊟Summary[edit | edit source]
- pan ID?: PNEUPAN003884000
- symbol?: hslO
- synonym:
- description?: Hsp33 family molecular chaperone HslO
- Hsp33 family molecular chaperone HslO
- chaperonin HslO
- 33 kDa chaperonin (heat shock protein 33 homolog)
- 33 kDa chaperonin
- Chaperonin (heat shock protein 33)
- chaperonin, 33 kDa
- heat shock protein 3HSP33 homolog
- molecular chaperone Hsp33
- Chaperonin, heat shock protein 33
- Disulfide bond chaperones of the HSP33 family
- heat shock protein Hsp33
- hsp33 family protein
- hsp33-like chaperonin
- redox-regulated molecular chaperone Hsp33
descriptions from strain specific annotations:
- strand?: +
- coordinates?: 5162777..5163649
- occurrence?: in 100% of 43 strains
⊟Orthologs[edit | edit source]
(12F)
ASP0581:
EL334_RS11425 (hslO)
(19F)
ATCC 49619:
EL263_RS10970 (hslO)
(23F)
ATCC 700669:
SPN23F_RS11410 (hslO)
(14)
INV200:
SPNINV200_RS10810 (hslO)
(14)
JJA:
SPJ_RS10965 (hslO)
(19F)
MDRSPN001:
MDRSPN_RS10510 (hslO)
(19A)
SP49:
BMJ42_RS11925 (hslO)
(1)
SPN032672:
SPN032672_RS04765 (hslO)
(3)
SPN034156:
SPN034156_RS05695 (hslO)
(3)
SPN034183:
SPN034183_RS10710 (hslO)
(3)
SPN994038:
SPN994038_RS10625 (hslO)
(3)
SPN994039:
SPN994039_RS10630 (hslO)
⊟Genome Viewer[edit | edit source]
| TIGR4 | |
| D39 | |
| D39V | |
| Hungary19A-6 | |
| EF3030 |
⊟Alignments[edit | edit source]
- alignment of orthologues: CLUSTAL format alignment by MAFFT L-INS-i (v7.505)
TIGR4 MDKIIKTISESGAFRAFVLDSTETVRTAQEKHQTQASSTVALGRTLIASQILAANEKGNT
D39 MDKIIKTISESGAFRAFVLDSTETVRTAQEKHQTQASSTVALGRTLIASQILAANEKGNT
D39V MDKIIKTISESGAFRAFVLDSTETVRTAQEKHQTQASSTVALGRTLIASQILAANEKGNT
Hungary19A-6 MDKIIKTISESGAFRAFVLDSTETVRTAQEKHQTQASSTVALGRTLIASQILAANEKGNT
EF3030 MDKIIKTISESGAFRAFVLDSTETVRTAQEKHQTQASSTVALGRTLIASQILAANEKGNT
************************************************************
TIGR4 KLTVKVLGSSSLGAIITVADTKGNVKGYVQNPGVDIKKTATGEVLVGPFVGNGQFLVITD
D39 KLTVKVLGSSSLGAIITVADTKGNVKGYVQNPGVDIKKTATGEVLVGPFVGNGQFLVITD
D39V KLTVKVLGSSSLGAIITVADTKGNVKGYVQNPGVDIKKTATGEVLVGPFVGNGQFLVITD
Hungary19A-6 KLTVKVLGSSSLGAIITVADTKGNVKGYVQNPGVDIKKTATGEVLVGPFVGNGQFLVITD
EF3030 KLTVKVLGSSSLGAIITVADTKGNVKGYVQNPGVDIKKTATGEVLVGPFVGNGQFLVITD
************************************************************
TIGR4 YGTGNPYNSITPLISGEIGEDLAFYLTESQQTPSAVGLNVLLDEEDKVKVAGGFLVQVLP
D39 YGTGNPYNSITPLISGEIGEDLAFYLTESQQTPSAVGLNVLLDEEDKVKVAGGFLVQVLP
D39V YGTGNPYNSITPLISGEIGEDLAFYLTESQQTPSAVGLNVLLDEEDKVKVAGGFLVQVLP
Hungary19A-6 YGTGNPYNSITPLISGEIGEDLAFYLTESQQTPSAVGLNVLLDEEDKVKVAGGFLVQVLP
EF3030 YGTGNPYNSITPLISGEIGEDLAFYLTESQQTPSAVGLNVLLDEEDKVKVAGGFLVQVLP
************************************************************
TIGR4 GAKKEEIARFEKRIQEMPAISTLLESDDHIEALLKAIYGDEAYKRLSEEEIRFQCDCSHE
D39 GAKKEEIARFEKRIQEMPAISTLLESDDHIEALLKAIYGDEAYKRLSEEEIRFQCDCSHE
D39V GAKKEEIARFEKRIQEMPAISTLLESDDHIEALLKAIYGDEAYKRLSEEEIRFQCDCSHE
Hungary19A-6 GAKKEEIARFEKRIQEMPAISTLLESDDHIEALLKAIYGDEAYKRLSEEEIRFQCDCSHE
EF3030 GAKKEEIARFEKRIQEMSAISTLLESDDHIEALLKAIYGDEAYKRLSEEEIHFQCDCSHE
*****************.*********************************:********
TIGR4 RFMNALASLPSSDLQEMKEEDHGAEITCQFCQTTYNFDEKDLEELIRDKS
D39 RFMNALASLPSSDLQEMKEEDHGAEITCQFCQTTYNFDEKDLEELIRDKS
D39V RFMNALASLPSSDLQEMKEEDHGAEITCQFCQTTYNFDEKDLEELIRDKS
Hungary19A-6 RFMNALASLPSSDLQEMKEEDHGAEITCQFCQTTYNFDEKDLEELIRDKS
EF3030 RFMNALASLPSSDLQEMKEEDHGVEITCQFCQTTYNFDEKDLEELIRDKS
***********************.**************************