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PangenomeTIGR4
serotype 4
D39serotype 2
D39Vserotype 2
Hungary19A-6serotype 19A
EF3030serotype 19F
670-6Bserotype 6B
6A-10serotype 6A
70585serotype 5
A026serotype 19F
A66serotype 3
AP200serotype 11A
ASP0581serotype 12F
ATCC 49619serotype 19F
ATCC 700669serotype 23F
BVJ1JLserotype 1
CGSP14serotype 14
G54serotype 19F
HU-OHserotype 3
Hu15serotype 19A
Hu17serotype 19A
INV104serotype 1
INV200serotype 14
JJAserotype 14
MDRSPN001serotype 19F
NCTC7466serotype 2
NU83127serotype 4
OXC141serotype 3
P1031serotype 1
R6serotype 2
SP49serotype 19A
SPN032672serotype 1
SPN034156serotype 3
SPN034183serotype 3
SPN994038serotype 3
SPN994039serotype 3
SPNA45serotype 3
ST556serotype 19F
TCH8431/19Aserotype 19A
Taiwan19F-14serotype 19F
Xen35serotype 4
gamPNI0373serotype 1
⊟Summary[edit | edit source]
- pan ID?: PNEUPAN003911000
- symbol?: comFC
- synonym:
- description?: comF family protein
- comF family protein
- putative late competence protein
- putative competence protein ComF
- amidophosphoribosyltransferase
- competence protein ComF, putative
- involved in transformation
- competence protein ComF
- amidophosphoribosyltransferase ComFC
- Competence protein F homolog,phosphoribosyltransferase domain; protein YhgH required for utilization of DNA as sole source of carbon and energy
- Involved in transformation (competence for DNA uptake)
- phosphoribosyl transferase domain protein
- Phosphoribosyltransferase domain protein, ComF operon protein C
- transformation-related protein
descriptions from strain specific annotations:
- strand?: +
- coordinates?: 5086936..5087598
- occurrence?: in 100% of 41 strains
⊟Orthologs[edit | edit source]
⊟Genome Viewer[edit | edit source]
| TIGR4 | |
| D39 | |
| D39V | |
| Hungary19A-6 | |
| EF3030 |
⊟Alignments[edit | edit source]
- alignment of orthologues: CLUSTAL format alignment by MAFFT L-INS-i (v7.505)
TIGR4 MKCLLCGQTMKTVLTFSSLLLLRNDDSCLCSDCDSTFERIGEENCPNCMKTELSTKCQDC
D39 MKCLLCGQTMKTVLTFSSLLLLRNDDSCLCSDCDSTFERIGEENCPNCMKTELSTKCQDC
D39V MKCLLCGQTMKTVLTFSSLLLLRNDDSCLCSDCDSTFERIGEENCPNCMKTELSTKCQDC
Hungary19A-6 MKCLLCGQTMKTVLTFSSLLLLRNDDSCLCSDCDSTFERIGEENCPNCMKTELSTKCQDC
EF3030 MKCLLCGQTMKTVLTFSSLLLLRNDDSCLCSDCDSTFERIGEENCPNCMKTELSTKCQDC
************************************************************
TIGR4 QLWCKEGVEVSHRAIFTYNQAMKDFFSRYKFDGDFLLRKVFASFLSEELKKYKEYQFVVI
D39 QLWCKEGVGVSHRAIFTYNQAMKDFFSRYKFDGDFLLRKVFASFLSEELKKYKEYQFVVI
D39V QLWCKEGVGVSHRAIFTYNQAMKDFFSRYKFDGDFLLRKVFASFLSEELKKYKEYQFVVI
Hungary19A-6 QLWCKEGVEVSHRAIFTYNQAMKDFFSRYKFDGDFLLRKVFASFLSEELKKYKEYQFVVI
EF3030 QFWCKEGVGVSHRAIFTYNQAMKDFFSRYKFDGDFLLRKVFASFLSEELKKYKEYQFVVI
*:****** ***************************************************
TIGR4 PLSPDRYANRGFNQVEGLVEAAGFEYLDLLEKREERASSSKNRSERLGTELPFFIKSGVT
D39 PLSPDRYANRGFNQVEGLVEAAGFEYLDLLEKREERASSSKNRSERLGTELPFFIKSGVT
D39V PLSPDRYANRGFNQVEGLVEAAGFEYLDLLEKREERASSSKNRSERLGTELPFFIKSGVT
Hungary19A-6 PLSPDRYANRGFNQVEGLVEAAGFEYLDLLEKREERASSSKNRSERLGTELPFFIKSGVT
EF3030 PLSPDRYANRGFNQVEGLVEAAGFEYLDLLEKREERASSSKNRSERLGTELPFFIKSGVT
************************************************************
TIGR4 IPKKILLIDDIYTTGATINRVKKLLEEAGAKDVKTFSLVR
D39 IPKKILLIDDIYTTGATINRVKKLLEEAGAKDVKTFSLVR
D39V IPKKILLIDDIYTTGATINRVKKLLEEAGAKDVKTFSLVR
Hungary19A-6 IPKKILLIDDIYTTGATINRVKKLLEEAGAKDVKTFSLVR
EF3030 IPKKILLIDDIYTTGATINRVKKLLEEAGAKDVKTFSLVR
****************************************