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PangenomeTIGR4
serotype 4
D39serotype 2
D39Vserotype 2
Hungary19A-6serotype 19A
EF3030serotype 19F
670-6Bserotype 6B
6A-10serotype 6A
70585serotype 5
A026serotype 19F
A66serotype 3
AP200serotype 11A
ASP0581serotype 12F
ATCC 49619serotype 19F
ATCC 700669serotype 23F
BVJ1JLserotype 1
CGSP14serotype 14
G54serotype 19F
HU-OHserotype 3
Hu15serotype 19A
Hu17serotype 19A
INV104serotype 1
INV200serotype 14
JJAserotype 14
MDRSPN001serotype 19F
NCTC7466serotype 2
NU83127serotype 4
OXC141serotype 3
P1031serotype 1
R6serotype 2
SP49serotype 19A
SPN032672serotype 1
SPN034156serotype 3
SPN034183serotype 3
SPN994038serotype 3
SPN994039serotype 3
SPNA45serotype 3
ST556serotype 19F
TCH8431/19Aserotype 19A
Taiwan19F-14serotype 19F
Xen35serotype 4
gamPNI0373serotype 1
⊟Summary[edit | edit source]
- pan ID?: PNEUPAN003919000
- symbol?: thiX
- synonym:
- description?: ABC transporter permease
- ABC transporter permease
- ABC transporter, permease protein
- Riboflavin transport system permease protein
- ABC transporter permease, nitrate/sulfonate/bicarbonate transport
- nitrate ABC transporter permease
- ABC transporter membrane-spanning permease - unknown substrate
- ABC-type nitrate/sulfonate/bicarbonate transport system, permease component
- binding-protein-dependent transport system inner membrane component family protein
- Hydroxymethylpyrimidine ABC transporter,transmembrane component
- Riboflavin transport system permease protein RibX
- thiamine ABC transporter ThiX, transmembrane component
descriptions from strain specific annotations:
- strand?: +
- coordinates?: 5094884..5095642
- occurrence?: in 100% of 41 strains
⊟Orthologs[edit | edit source]
⊟Genome Viewer[edit | edit source]
| TIGR4 | |
| D39 | |
| D39V | |
| Hungary19A-6 | |
| EF3030 |
⊟Alignments[edit | edit source]
- alignment of orthologues: CLUSTAL format alignment by MAFFT L-INS-i (v7.505)
TIGR4 MRNLRSILRRHISLLGFLGVLSIWQLAGFLKLLPKFILPTPLEILQPFVRDREFLWHHSW
D39 MRNLKSILRRHISLLGFLGVLSIWQLAGFLKLLPKFILPTPLEILQPFVRDREFLWHHSW
D39V MRNLKSILRRHISLLGFLGVLSIWQLAGFLKLLPKFILPTPLEILQPFVRDREFLWHHSW
Hungary19A-6 MRNLRSILRRHISLLGFLGVLSIWQLAGFLKLLPKFILPTPLEILQPFVRDREFLWHHSW
EF3030 MRNLKSILRRHISLLGFLGVLSIWQLAGFLKLLPKFILPTPLEILQPFVRDREFLWHHSW
****:*******************************************************
TIGR4 ATLRVALLGLILGVLIACLMAVLMDSLTWLNDLIYPMMVVIQTIPTIAIAPILVLWLGYG
D39 ATLRVALLGLILGVLIACLMAVLMDSLTWLNDLIYPMMVVIQTIPTIAIAPILVLWLGYG
D39V ATLRVALLGLILGVLIACLMAVLMDSLTWLNDLIYPMMVVIQTIPTIAIAPILVLWLGYG
Hungary19A-6 ATLRVALLGLILGVLIACLMAVLMDSLTWLNDLIYPMMVVIQTIPTIAIAPILVLWLGYG
EF3030 ATLRVALLGLILGVLIACLMAVLMDSLTWLNDLIYPMMVVIQTIPTIAIAPILVLWLGYG
************************************************************
TIGR4 ILPKIVLIILTTTFPIIVSILDGFRHCDKDMLTLFSLMRAKPWQILWHFKIPVSLPYFYA
D39 ILPKIVLIILTTTFPIIVSILDGFRHCDKDMLTLFSLMRANPWQILWHFKIPVSLPYFYA
D39V ILPKIVLIILTTTFPIIVSILDGFRHCDKDMLTLFSLMRANPWQILWHFKIPVSLPYFYA
Hungary19A-6 ILPKIVLIILTTTFPIIVSILDGFRHCDKDMLTLFSLMRAKPWQILWHFKIPVSLPYFYA
EF3030 ILPKIVLIILTTTFPIIVSILDGFRHCDKDMLTLFSLMRAKPWQILWHFKIPVSLPYFYA
****************************************:*******************
TIGR4 GLRVSVSYAFITTVVSEWLGGFEGLGVYMIQSKKLFQYDTMFAIIILVSIISLLGMKLVD
D39 GLRVSVSYAFITTVVSEWLGGFEGLGVYMIQSKKLFQYDTMFAIIILVSIISLLGMKLVD
D39V GLRVSVSYAFITTVVSEWLGGFEGLGVYMIQSKKLFQYDTMFAIIILVSIISLLGMKLVD
Hungary19A-6 GLRVSVSYAFITTVVSEWLGGFEGLGVYMIQSKKLFQYDTMFAIIILVSIISLLGMKLVD
EF3030 GLRVSVSYAFITTVVSEWLGGFEGLGVYMIQSKKLFQYDTMFAIIILVSIISLLGMKLVD
************************************************************
TIGR4 ISEKYVIKWKRS
D39 ISEKYVIKWKRT
D39V ISEKYVIKWKRT
Hungary19A-6 ISEKYVIKWKRS
EF3030 ISEKYVIKWKRS
***********: