PangenomeTIGR4

serotype 4

D39

serotype 2

D39V

serotype 2

Hungary19A-6

serotype 19A

EF3030

serotype 19F

670-6B

serotype 6B

6A-10

serotype 6A

70585

serotype 5

A026

serotype 19F

A66

serotype 3

AP200

serotype 11A

ASP0581

serotype 12F

ATCC 49619

serotype 19F

ATCC 700669

serotype 23F

BM6001

serotype 19F

BVJ1JL

serotype 1

CGSP14

serotype 14

G54

serotype 19F

HU-OH

serotype 3

Hu15

serotype 19A

Hu17

serotype 19A

INV104

serotype 1

INV200

serotype 14

JJA

serotype 14

MDRSPN001

serotype 19F

NCTC7465

serotype 1

NCTC7466

serotype 2

NU83127

serotype 4

OXC141

serotype 3

P1031

serotype 1

R6

serotype 2

SP49

serotype 19A

SPN032672

serotype 1

SPN034156

serotype 3

SPN034183

serotype 3

SPN994038

serotype 3

SPN994039

serotype 3

SPNA45

serotype 3

ST556

serotype 19F

TCH8431/19A

serotype 19A

Taiwan19F-14

serotype 19F

Xen35

serotype 4

gamPNI0373

serotype 1

⊟Summary

• pan ID^?: PNEUPAN003933000
• symbol^?: recF
• synonym:
• description^?: DNA replication/repair protein RecF

  descriptions from strain specific annotations:

  • DNA replication/repair protein RecF
  • DNA replication and repair protein RecF
  • Recombination protein RecF
  • DNA recombination and repair protein RecF
  • recombinase RecF
  • recF protein
  • Recombinational DNA repair ATPase (RecF pathway)
  • recombination protein F
• strand^?: +
• coordinates^?: 5224322..5225419
• occurrence^?: in 100% of 43 strains

⊟Orthologs

(4)^?
TIGR4:
SP_RS11370 (recF)
(2)
D39:
SPD_RS10865 (recF)
(2)
D39V:
SPV_RS10865 (recF)
(19A)
Hungary19A-6:
SPH_RS11850 (recF)
(19F)
EF3030:
EF3030_RS11030 (recF)
(6B)^?
670-6B:
SP670_RS12025 (recF)
(6A)
6A-10:
HKM25_RS11295 (recF)
(5)
70585:
SP70585_RS11680 (recF)
(19F)
A026:
T308_RS10890 (recF)
(3)
A66:
A66_RS10165 (recF)
(11A)
AP200:
SPAP_RS11230 (recF)
(12F)
ASP0581:
EL334_RS11630 (recF)
(19F)
ATCC 49619:
EL263_RS11160 (recF)
(23F)
ATCC 700669:
SPN23F_RS11605 (recF)
(19F)
BM6001:
ODS73_RS11945 (recF)
(1)
BVJ1JL:
JN057_RS10960 (recF)
(14)
CGSP14:
SPCG_RS11595 (recF)
(19F)
G54:
SPG_RS10845 (recF)
(1)
gamPNI0373:
HMPREF1038_RS10990 (recF)
(3)
HU-OH:
EL271_RS11135 (recF)
(19A)
Hu15:
SPNHU15_RS10710 (recF)
(19A)
Hu17:
SPNHU17_RS10690 (recF)
(1)
INV104:
INV104_RS11260 (recF)
(14)
INV200:
SPNINV200_RS11010 (recF)
(14)
JJA:
SPJ_RS11155 (recF)
(19F)
MDRSPN001:
MDRSPN_RS10730 (recF)
(1)
NCTC7465:
AT689_RS02755 (recF)
(2)
NCTC7466:
DQM66_RS10860 (recF)
(4)
NU83127:
EL277_RS11575 (recF)
(3)
OXC141:
SPNOXC_RS10890 (recF)
(1)
P1031:
SPP_RS11235 (recF)
(2)
R6:
SPR_RS10345 (recF)
(19A)
SP49:
BMJ42_RS12120 (recF)
(1)
SPN032672:
SPN032672_RS04570 (recF)
(3)
SPN034156:
SPN034156_RS05890 (recF)
(3)
SPN034183:
SPN034183_RS10905 (recF)
(3)
SPN994038:
SPN994038_RS10820 (recF)
(3)
SPN994039:
SPN994039_RS10825 (recF)
(3)
SPNA45:
SPNA45_RS11530 (recF)
(19F)
ST556:
MYY_RS11320 (recF)
(19F)
Taiwan19F-14:
SPT_RS11105 (recF)
(19A)
TCH8431/19A:
HMPREF0837_RS01225 (recF)
(4)
Xen35:
CXP32_RS11525 (recF)

⊟Genome Viewer

TIGR4
D39
D39V
Hungary19A-6
EF3030

⊟Alignments

• alignment of orthologues:
  CLUSTAL format alignment by MAFFT L-INS-i (v7.505)
  
  
  TIGR4           MWLQHLSLKTFRNYKETKIDFNPKLNVFLGRNAQGKTNMLEAIYFLALTRSHRTRTDKNL
  D39             MWLQHLSLKTFRNYKETKIDFNPKLNVFLGRNAQGKTNMLEAIYFLALTRSHRTRTDKNL
  D39V            MWLQHLSLKTFRNYKETKIDFNPKLNVFLGRNAQGKTNMLEAIYFLALTRSHRTRTDKNL
  Hungary19A-6    MWLQHLSLKTFRNYKETKIDFNPKLNVFLGRNAQGKTNMLEAIYFLALTRSHRTRTDKNL
  EF3030          MWLQHLSLKTFRNYKETKIDFNPKLNVFLGRNAQGKTNMLEAIYFLALTRSHRTQTDKNL
                  ******************************************************:*****
  
  TIGR4           IHFDEEQLHLSGLVQKKTGSIPLEIELTQKGRVTKVNHLKQARLSDYVGHMNVVLFAPED
  D39             IHFDEEQLHLSGLVQKKTGSIPLEIELTQKGRVTKVNHLKQARLSDYVGHMNVVLFAPED
  D39V            IHFDEEQLHLSGLVQKKTGSIPLEIELTQKGRVTKVNHLKQARLSDYVGHMNVVLFAPED
  Hungary19A-6    IHFDEEQLHLSGLVQKKTGSIPLEIELTQKGRVTKVNHLKQARLSDYVGHMNVVLFAPED
  EF3030          IHFDEEQLHLSGLVQKKTGSIPLEIELTQKGRVTKVNHLKQARLSDYVGHMNVVLFAPED
                  ************************************************************
  
  TIGR4           LQLIKGAPSIRRKFIDMELGQIKPIYLSDLTNYNHILKQRNTYLKSAQKIDETFLSVLDD
  D39             LQLIKGAPSIRRKFIDMELGQIKPIYLSDLTNYNHILKQRNTYLKSAQKIDETFLSVLDD
  D39V            LQLIKGAPSIRRKFIDMELGQIKPIYLSDLTNYNHILKQRNTYLKSAQKIDETFLSVLDD
  Hungary19A-6    LQLIKGAPSIRRKFIDMELGQIKPIYLSDLTNYNHILKQRNTYLKSAQKIDETFLSVLDD
  EF3030          LQLIKGAPSIRRKFIDMELGQIKPIYLSDLTNYNHILKQRNTYLKSAQKIDETFLSVLDD
                  ************************************************************
  
  TIGR4           QLVDYGCRVMNHRLDFIKKLESFGRKKHFELSNQIEELSISYQSSVNITDKQNLSESFKI
  D39             QLVDYGCRVMNHRLDFIKKLESFGRKKHFELSNQIEELSISYQSSVNITDKQNLSESFKI
  D39V            QLVDYGCRVMNHRLDFIKKLESFGRKKHFELSNQIEELSISYQSSVNITDKQNLSESFKI
  Hungary19A-6    QLVDYGCRVMNHRLDFIKKLESFGRKKHFELSNQIEELSISYQSSVNITDKQNLSESFKI
  EF3030          QLVDYGCRVMNHRLDFIKKLESFGRKKHFELSNQIEELSISYQSSVNITDKQNLSESFKI
                  ************************************************************
  
  TIGR4           ALEKSRSRDLFKKNTGVGPHRDDISFYINGMDASFGSQGQHRSLVLSIKLAEIELMESIT
  D39             ALEKSRSRDLFKKNTGVGPHRDDISFYINGMDASFGSQGQHRSLVLSIKLAEIELMESIT
  D39V            ALEKSRSRDLFKKNTGVGPHRDDISFYINGMDASFGSQGQHRSLVLSIKLAEIELMESIT
  Hungary19A-6    ALEKSRSRDLFKKNTGVGPHRDDISFYINGMDASFGSQGQHRSLVLSIKLAEIELMESIT
  EF3030          ALEKSRSRDLFKKNTGVGPHRDDISFYINGMDASFGSQGQHRSLVLSIKLAEIELMESIT
                  ************************************************************
  
  TIGR4           TESPILLLDDVMSELDNTRQLKLLETISQSIQTFITTTSLDHLQNLPENLSIFTIQDGKA
  D39             TESPILLLDDVMSELDNTRQLKLLETISQSIQTFITTTSLDHLQNLPENLSIFTIQDGKA
  D39V            TESPILLLDDVMSELDNTRQLKLLETISQSIQTFITTTSLDHLQNLPENLSIFTIQDGKA
  Hungary19A-6    TESPILLLDDVMSELDNTRQLKLLETISQSIQTFITTTSLDHLQNLPENLSIFTIQDGKA
  EF3030          TESPILLLDDVMSELDNTRQLKLLETISQSIQTFITTTSLDHLQNLPENLSIFTIQDGKA
                  ************************************************************
  
  TIGR4           AVNGN
  D39             SVNGN
  D39V            SVNGN
  Hungary19A-6    AVNGN
  EF3030          AVNGN
                  :****