PangenomeTIGR4

serotype 4

D39

serotype 2

D39V

serotype 2

Hungary19A-6

serotype 19A

EF3030

serotype 19F

670-6B

serotype 6B

6A-10

serotype 6A

70585

serotype 5

A026

serotype 19F

A66

serotype 3

AP200

serotype 11A

ASP0581

serotype 12F

ATCC 49619

serotype 19F

ATCC 700669

serotype 23F

BM6001

serotype 19F

BVJ1JL

serotype 1

CGSP14

serotype 14

G54

serotype 19F

HU-OH

serotype 3

Hu15

serotype 19A

Hu17

serotype 19A

INV104

serotype 1

INV200

serotype 14

JJA

serotype 14

MDRSPN001

serotype 19F

NCTC7465

serotype 1

NCTC7466

serotype 2

NU83127

serotype 4

OXC141

serotype 3

P1031

serotype 1

R6

serotype 2

SP49

serotype 19A

SPN032672

serotype 1

SPN034156

serotype 3

SPN034183

serotype 3

SPN994038

serotype 3

SPN994039

serotype 3

SPNA45

serotype 3

ST556

serotype 19F

TCH8431/19A

serotype 19A

Taiwan19F-14

serotype 19F

Xen35

serotype 4

gamPNI0373

serotype 1

⊟Summary

• pan ID^?: PNEUPAN003935000
• symbol^?: trpS
• synonym:
• description^?: tryptophan--tRNA ligase

  descriptions from strain specific annotations:

  • tryptophan--tRNA ligase
  • tryptophanyl-tRNA synthetase
  • Tryptophan--tRNA ligase 2
  • tryptophanyl-tRNA synthase
• strand^?: -
• coordinates^?: 5227102..5228127
• occurrence^?: in 100% of 43 strains

⊟Orthologs

(4)^?
TIGR4:
SP_RS11380 (trpS)
(2)
D39:
SPD_RS10875 (trpS)
(2)
D39V:
SPV_RS10875 (trpS)
(19A)
Hungary19A-6:
SPH_RS11860 (trpS)
(19F)
EF3030:
EF3030_RS11040 (trpS)
(6B)^?
670-6B:
SP670_RS12035 (trpS)
(6A)
6A-10:
HKM25_RS11305 (trpS)
(5)
70585:
SP70585_RS11690 (trpS)
(19F)
A026:
T308_RS10900 (trpS)
(3)
A66:
A66_RS10175 (trpS)
(11A)
AP200:
SPAP_RS11240 (trpS)
(12F)
ASP0581:
EL334_RS11640 (trpS)
(19F)
ATCC 49619:
EL263_RS11170 (trpS)
(23F)
ATCC 700669:
SPN23F_RS11615 (trpS)
(19F)
BM6001:
ODS73_RS11955 (trpS)
(1)
BVJ1JL:
JN057_RS10970 (trpS)
(14)
CGSP14:
SPCG_RS11605 (trpS)
(19F)
G54:
SPG_RS10855 (trpS)
(1)
gamPNI0373:
HMPREF1038_RS11000 (trpS)
(3)
HU-OH:
EL271_RS11145 (trpS)
(19A)
Hu15:
SPNHU15_RS10720 (trpS)
(19A)
Hu17:
SPNHU17_RS10700 (trpS)
(1)
INV104:
INV104_RS11270 (trpS)
(14)
INV200:
SPNINV200_RS11020 (trpS)
(14)
JJA:
SPJ_RS11165 (trpS)
(19F)
MDRSPN001:
MDRSPN_RS10740 (trpS)
(1)
NCTC7465:
AT689_RS02745 (trpS)
(2)
NCTC7466:
DQM66_RS10870 (trpS)
(4)
NU83127:
EL277_RS11585 (trpS)
(3)
OXC141:
SPNOXC_RS10900 (trpS)
(1)
P1031:
SPP_RS11245 (trpS)
(2)
R6:
SPR_RS10355 (trpS)
(19A)
SP49:
BMJ42_RS12130 (trpS)
(1)
SPN032672:
SPN032672_RS04560 (trpS)
(3)
SPN034156:
SPN034156_RS05900 (trpS)
(3)
SPN034183:
SPN034183_RS10915 (trpS)
(3)
SPN994038:
SPN994038_RS10830 (trpS)
(3)
SPN994039:
SPN994039_RS10835 (trpS)
(3)
SPNA45:
SPNA45_RS11540 (trpS)
(19F)
ST556:
MYY_RS11330 (trpS)
(19F)
Taiwan19F-14:
SPT_RS11115 (trpS)
(19A)
TCH8431/19A:
HMPREF0837_RS01235 (trpS)
(4)
Xen35:
CXP32_RS11535 (trpS)

⊟Genome Viewer

TIGR4
D39
D39V
Hungary19A-6
EF3030

⊟Alignments

• alignment of orthologues:
  CLUSTAL format alignment by MAFFT L-INS-i (v7.505)
  
  
  TIGR4           MTKPIILTGDRPTGKLHIGHYVGSLKNRVLLQEEDKYDMFVFLADQQALTDHAKDPQTIV
  D39             MTKPIILTGDRPTGKLHIGHYVGSLKNRVLLQEEDKYDMFVFLADQQALTDHAKDPQTIV
  D39V            MTKPIILTGDRPTGKLHIGHYVGSLKNRVLLQEEDKYDMFVFLADQQALTDHAKDPQTIV
  Hungary19A-6    MTKPIILTGDRPTGKLHIGHYVGSLKNRVLLQEEDKYDMFVFLADQQALTDHAKDPQTIV
  EF3030          MTKPIILTGDRPTGKLHIGHYVGSLKNRVLLQEEDKYDMFVFLADQQALTDHAKDPQTIV
                  ************************************************************
  
  TIGR4           ESIGNVALDYLAVGLDPNKSTIFIQSQIPELAELSMYYMNLVSLARLERNPTVKTEISQK
  D39             ESIGNVALDYLAVGLDPNKSTIFIQSQIPELAELSMYYMNLVSLARLERNPTVKTEISQK
  D39V            ESIGNVALDYLAVGLDPNKSTIFIQSQIPELAELSMYYMNLVSLARLERNPTVKTEISQK
  Hungary19A-6    ESIGNVALDYLAVGLDPNKSTIFIQSQIPELAELSMYYMNLVSLARLERNPTVKTEISQK
  EF3030          ESIGNVALDYLAVGLDPNKSTIFIQSQIPELAELSMYYMNLVSLARLERNPTVKTEISQK
                  ************************************************************
  
  TIGR4           GFGESIPTGFLVYPIAQAADITAFKANYVPVGTDQKPMIEQTREIVRSFNNAYNCDVLVE
  D39             GFGESIPTGFLVYPIAQAADITAFKANYVPVGTDQKPMIEQTREIVRSFNNAYNCDVLVE
  D39V            GFGESIPTGFLVYPIAQAADITAFKANYVPVGTDQKPMIEQTREIVRSFNNAYNCDVLVE
  Hungary19A-6    GFGESIPTGFLVYPIAQAADITAFKANYVPVGTDQKPMIEQTREIVRSFNNAYNCDVLVE
  EF3030          GFGESIPTGFLVYPIAQAADITAFKANYVPVGTDQKPMIEQTREIVRSFNNAYNCDVLVE
                  ************************************************************
  
  TIGR4           PEGIYPENERAGRLPGLDGNAKMSKSLNNGIYLADDADTLRKKVMSMYTDPDHIRVEDPG
  D39             PEGIYPENERAGRLPGLDGNAKMSKSLNNGIYLADDADTLRKKVMSMYTDPDHIRVEDPG
  D39V            PEGIYPENERAGRLPGLDGNAKMSKSLNNGIYLADDADTLRKKVMSMYTDPDHIRVEDPG
  Hungary19A-6    PEGIYPENERAGRLPGLDGNAKMSKSLNNGIYLADDADTLRKKVMSMYTDPDHIRVEDPG
  EF3030          PEGIYPENERAGRLPGLDGNAKMSKSLNNGIYLADDADTLRKKVMSMYTDPDHIRVEDPG
                  ************************************************************
  
  TIGR4           KIEGNMVFHYLDVFGRPEDAQEIADMKERYQRGGLGDVKTKRYLLEILERELGPIRERRI
  D39             KIEGNMVFHYLDVFGRPEDAQEIADMKERYQRGGLGDVKTKRYLLEILERELGPIRERRI
  D39V            KIEGNMVFHYLDVFGRPEDAQEIADMKERYQRGGLGDVKTKRYLLEILERELGPIRERRI
  Hungary19A-6    KIEGNMVFHYLDVFGRPEDAQEIADMKERYQRGGLGDVKTKRYLLEILERELGPIRERRI
  EF3030          KIEGNMVFHYLDVFGRPEDAQEIADMKERYQRGGLGDVKTKRYLLEILERELGPIRERRI
                  ************************************************************
  
  TIGR4           EFAKDMGEVYNMIQKGSERAREVAGQTLSEVKGAMGLHYFN
  D39             EFAKDMGEVYNMIQKGSERAREVAGQTLSEVKGAMGLHYFN
  D39V            EFAKDMGEVYNMIQKGSERAREVAGQTLSEVKGAMGLHYFN
  Hungary19A-6    EFAKDMGEVYNMIQKGSERAREVAGQTLSEVKGAMGLHYFN
  EF3030          EFAKDMGEVYNMIQKGSERAREVAGQTLSEVKGAMGLHYFN
                  *****************************************