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PangenomeTIGR4
serotype 4
D39
serotype 2
D39V
serotype 2
Hungary19A-6
serotype 19A
EF3030
serotype 19F
670-6B
serotype 6B
6A-10
serotype 6A
70585
serotype 5
A026
serotype 19F
A66
serotype 3
AP200
serotype 11A
ASP0581
serotype 12F
ATCC 49619
serotype 19F
ATCC 700669
serotype 23F
BM6001
serotype 19F
BVJ1JL
serotype 1
CGSP14
serotype 14
G54
serotype 19F
HU-OH
serotype 3
Hu15
serotype 19A
Hu17
serotype 19A
INV104
serotype 1
INV200
serotype 14
JJA
serotype 14
MDRSPN001
serotype 19F
NCTC7465
serotype 1
NCTC7466
serotype 2
NU83127
serotype 4
OXC141
serotype 3
P1031
serotype 1
R6
serotype 2
SP49
serotype 19A
SPN032672
serotype 1
SPN034156
serotype 3
SPN034183
serotype 3
SPN994038
serotype 3
SPN994039
serotype 3
SPNA45
serotype 3
ST556
serotype 19F
TCH8431/19A
serotype 19A
Taiwan19F-14
serotype 19F
Xen35
serotype 4
gamPNI0373
serotype 1

NCBI: 15-DEC-2024

⊟Summary[edit | edit source]

  • organism: Streptococcus pneumoniae 670-6B
  • locus tag: SP670_RS01320 [old locus tag: SP670_0264 ]
  • pan locus tag?: PNEUPAN000918000
  • symbol: SP670_RS01320
  • pan gene symbol?: ypdF
  • synonym:
  • product: M24 family metallopeptidase

⊟Genome View[edit | edit source]

⊟Gene[edit | edit source]

⊟General[edit | edit source]

  • type: CDS
  • locus tag: SP670_RS01320 [old locus tag: SP670_0264 ]
  • symbol: SP670_RS01320
  • product: M24 family metallopeptidase
  • replicon: chromosome
  • strand: +
  • coordinates: 234825..235886
  • length: 1062
  • essential: unknown

⊟Accession numbers[edit | edit source]

  • Location: NC_014498 (234825..235886) NCBI
  • BioCyc: SP670_RS01320 BioCyc
  • MicrobesOnline:
  • PneumoBrowse for strain D39V: SPV_0177 PneumoBrowse

⊟Phenotype[edit | edit source]

Share your knowledge and add information here. [edit]

⊟DNA sequence[edit | edit source]

  • 1
    61
    121
    181
    241
    301
    361
    421
    481
    541
    601
    661
    721
    781
    841
    901
    961
    1021
    ATGAATAAACGCGTACAAGCATTTCTAGCTAAAATGCAAGAAAAAGAACTAGATGGTGTC
    ATCATCAACAATCTTAAAAACGTCTATTATTTGACTGGTTTTTGGGGCTCAAACGGAACA
    GTCTTTATCAGCCGTGACCGTCAGGTCTTAGTGACAGACTCTCGCTATATCATCGCAGCT
    AAGCAAGAAACCAGTGGTTTTGAGATTGTGGCTGATCGTGATGAATTGGCTGTCATTGCA
    GGAATTGTTAAGGACATGGGCTTGACTCGTATCGGTTTTGAAGATGAGATTTCAGTGTCT
    TATTACCACCGTATGCAGGCAGCTTTTGCAGGTTTGGACTTGTTTCCGCAAACTCAGTTT
    GTGGAAGGTCTTCGTATGATTAAGGATGAGGCAGAGATTGCAGCGATTCGCAAGGCTTGT
    TCTATCTCAGACCAAGCTTTCCGCGATGCGCTTGACTTTATCAAACCAGGAAAAACTGAA
    ATTGAGATTGCCAACTTCCTTGACTTCCGCATGCGTGAGTTGGGAGCATCTGGCTTATCT
    TTTGATACGATCCTAGCTAGCGGTATCAATTCTTCTAAACCCCATGCCCATCCAATGCAC
    AAACCAGTGGAGTTGGGAGAAGCCATTACCATGGACTTCGGCTGTCTCTATGACCACTAT
    GTCAGTGATATGACCCGGACTATCTATCTAGGGCATGTTAGCGATGAGCAGGCAGAGATT
    TACAATACGGTTCTAAAAGCTAACCAAGCCTTGATTGACCAAGCTAAGGCAGGCTTAGGT
    TTCCGTGACTTTGACAAAATCCCTCGTGATATTATCATTGAGGCAGGTTATGGCGACTAC
    TTTACTCACGGCATTGGCCACGGTATTGGTCTGGATATCCATGAGGAACCCTACTTTAGT
    CAGACTTCTACAGAAACTATTAAGACAGGTATGGCCTTAACCGATGAACCAGGTATCTAT
    ATCGAAGGCAAATATGGCGTTCGTATCGAGGATGATATCCTGATTACAGAGACAGGTTGT
    GAATTATTGACCCTAGCTCCAAAAGAGTTGATAGTCATTTAG
    60
    120
    180
    240
    300
    360
    420
    480
    540
    600
    660
    720
    780
    840
    900
    960
    1020
    1062

⊟Protein[edit | edit source]

⊟General[edit | edit source]

  • locus tag: SP670_RS01320 [old locus tag: SP670_0264 ]
  • symbol: SP670_RS01320
  • description: M24 family metallopeptidase
  • length: 353
  • theoretical pI: 4.59783
  • theoretical MW: 39361.6
  • GRAVY: -0.0832861

⊟Function[edit | edit source]

  • reaction:
    EC 3.4.-.-?  ExPASy
  • TIGRFAM:
    ectoine utilization protein EutD (TIGR02993; EC 3.-.-.-; HMM-score: 74.3)
    Genetic information processing Protein fate Protein modification and repair methionine aminopeptidase, type I (TIGR00500; EC 3.4.11.18; HMM-score: 72.4)
    and 1 more
    Genetic information processing Protein fate Protein modification and repair methionine aminopeptidase, type II (TIGR00501; EC 3.4.11.18; HMM-score: 34.5)
  • TheSEED: see SP670_0264
  • PFAM:
    no clan defined Peptidase_M24; Metallopeptidase family M24 (PF00557; HMM-score: 210.1)
    and 1 more
    AMP_N-like (CL0356) Creatinase_N; Creatinase/Prolidase N-terminal domain (PF01321; HMM-score: 88.3)

⊟Structure, modifications & cofactors[edit | edit source]

  • domains:
  • modifications:
  • cofactors:
  • effectors:

⊟Localization[edit | edit source]

  • PSORTb: Cytoplasmic
    • Cytoplasmic Score: 9.97
    • Cytoplasmic Membrane Score: 0
    • Cellwall Score: 0.01
    • Extracellular Score: 0.02
    • Internal Helices: 0
  • DeepLocPro: Cytoplasmic
    • Cytoplasmic Score: 0.9975
    • Cytoplasmic Membrane Score: 0.0004
    • Cell wall & surface Score: 0.0001
    • Extracellular Score: 0.0021
  • SignalP: no predicted signal peptide
    • SP(Sec/SPI): 0.004391
    • TAT(Tat/SPI): 0.000292
    • LIPO(Sec/SPII): 0.000441
  • predicted transmembrane helices (TMHMM): 0

⊟Accession numbers[edit | edit source]

  • GI:
  • RefSeq: WP_001042884 NCBI
  • UniProt:

⊟Protein sequence[edit | edit source]

  • MNKRVQAFLAKMQEKELDGVIINNLKNVYYLTGFWGSNGTVFISRDRQVLVTDSRYIIAAKQETSGFEIVADRDELAVIAGIVKDMGLTRIGFEDEISVSYYHRMQAAFAGLDLFPQTQFVEGLRMIKDEAEIAAIRKACSISDQAFRDALDFIKPGKTEIEIANFLDFRMRELGASGLSFDTILASGINSSKPHAHPMHKPVELGEAITMDFGCLYDHYVSDMTRTIYLGHVSDEQAEIYNTVLKANQALIDQAKAGLGFRDFDKIPRDIIIEAGYGDYFTHGIGHGIGLDIHEEPYFSQTSTETIKTGMALTDEPGIYIEGKYGVRIEDDILITETGCELLTLAPKELIVI

⊟Experimental data[edit | edit source]

  • protein localization:
  • interaction partners:

⊟Expression & Regulation[edit | edit source]

⊟Operon[edit | edit source]

⊟Regulation[edit | edit source]

  • regulator:

⊟Expression data[edit | edit source]

⊟Biological Material[edit | edit source]

⊟Mutants[edit | edit source]

⊟Expression vector[edit | edit source]

⊟lacZ fusion[edit | edit source]

⊟GFP fusion[edit | edit source]

⊟two-hybrid system[edit | edit source]

⊟FLAG-tag construct[edit | edit source]

⊟Antibody[edit | edit source]

⊟Other Information[edit | edit source]

You are kindly invited to share additional interesting facts.

⊟Literature[edit | edit source]

⊟References[edit | edit source]

⊟Relevant publications[edit | edit source]

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