Jump to navigation
Jump to search
PangenomeTIGR4
serotype 4
D39serotype 2
D39Vserotype 2
Hungary19A-6serotype 19A
EF3030serotype 19F
670-6Bserotype 6B
6A-10serotype 6A
70585serotype 5
A026serotype 19F
A66serotype 3
AP200serotype 11A
ASP0581serotype 12F
ATCC 49619serotype 19F
ATCC 700669serotype 23F
BVJ1JLserotype 1
CGSP14serotype 14
G54serotype 19F
HU-OHserotype 3
Hu15serotype 19A
Hu17serotype 19A
INV104serotype 1
INV200serotype 14
JJAserotype 14
MDRSPN001serotype 19F
NCTC7466serotype 2
NU83127serotype 4
OXC141serotype 3
P1031serotype 1
R6serotype 2
SP49serotype 19A
SPN032672serotype 1
SPN034156serotype 3
SPN034183serotype 3
SPN994038serotype 3
SPN994039serotype 3
SPNA45serotype 3
ST556serotype 19F
TCH8431/19Aserotype 19A
Taiwan19F-14serotype 19F
Xen35serotype 4
gamPNI0373serotype 1
NCBI: 15-OCT-2021
⊟Summary[edit | edit source]
- organism: Streptococcus pneumoniae 70585
- locus tag: SP70585_RS03280 [old locus tag: SP70585_0667 ]
- pan locus tag?: PNEUPAN001533000
- symbol: SP70585_RS03280
- pan gene symbol?: fba
- synonym:
- product: fructose-bisphosphate aldolase
⊟Genome View[edit | edit source]
⊟Gene[edit | edit source]
⊟General[edit | edit source]
- type: CDS
- locus tag: SP70585_RS03280 [old locus tag: SP70585_0667 ]
- symbol: SP70585_RS03280
- product: fructose-bisphosphate aldolase
- replicon: chromosome
- strand: +
- coordinates: 596924..597805
- length: 882
- essential: unknown other strains
⊟Accession numbers[edit | edit source]
- Location: NC_012468 (596924..597805) NCBI
- BioCyc: SP70585_RS03280 BioCyc
- MicrobesOnline: see SP70585_0667
- PneumoBrowse for strain D39V: SPV_0526 PneumoBrowse
⊟Phenotype[edit | edit source]
Share your knowledge and add information here. [edit]
⊟DNA sequence[edit | edit source]
- 1
61
121
181
241
301
361
421
481
541
601
661
721
781
841ATGGCAATCGTTTCAGCAGAAAAATTTGTCCAAGCAGCCCGTGACAACGGTTATGCAGTT
GGTGGATTTAACACAAACAACCTTGAGTGGACTCAAGCTATCTTGCGCGCAGCAGAAGCT
AAAAAAGCTCCAGTTTTGATCCAAACTTCAATGGGTGCTGCTAAATACATGGGTGGTTAC
AAAGTTGCTCGCAACTTGATCGCTAACCTTGTTGAATCAATGGGTATCACTGTACCAGTA
GCTATCCACCTTGACCACGGTCACTACGAAGATGCACTTGAGTGTATCGAAGTTGGTTAT
ACTTCAATCATGTTTGACGGTTCACACCTTCCAGTTGAAGAAAACCTTAAATTGGCTAAA
GAAGTTGTTGAAAAAGCACACGCTAAAGGTATCTCAGTAGAAGCTGAAGTTGGTACTATC
GGTGGTGAAGAAGACGGAATCATCGGTAAAGGTGAATTGGCTCCAATCGAAGACGCTAAA
GCAATGGTTGAAACTGGTATCGACTTCTTGGCAGCTGGTATCGGTAACATCCACGGCCCT
TACCCAGTAAACTGGGAAGGTCTTGACCTTGACCACTTGCAAAAATTGACAGAAGCTCTT
CCAGGATTCCCAATCGTATTGCACGGTGGATCAGGTATTCCTGATGAGCAAATCCAAGCA
GCTATCAAACTTGGTGTTGCCAAAGTTAACGTTAACACAGAATGCCAAATCGCATTCGCT
AACGCAACTCGTAAATTTGCTCGTGACTACGAAGCAAACGAAGCAGAATACGATAAGAAA
AAACTCTTCGACCCACGTAAATTCTTGGCTGACGGTGTAAAAGCTATCCAAGCATCGGTT
GAAGAACGTATCGACGTATTCGGTTCAGAAGGTAAAGCATAA60
120
180
240
300
360
420
480
540
600
660
720
780
840
882
⊟Protein[edit | edit source]
⊟General[edit | edit source]
- locus tag: SP70585_RS03280 [old locus tag: SP70585_0667 ]
- symbol: SP70585_RS03280
- description: fructose-bisphosphate aldolase
- length: 293
- theoretical pI: 4.74308
- theoretical MW: 31401.5
- GRAVY: -0.078157
⊟Function[edit | edit source]
- TIGRFAM: Energy metabolism Glycolysis/gluconeogenesis fructose-1,6-bisphosphate aldolase, class II (TIGR01859; EC 4.1.2.13; HMM-score: 410.5)and 5 moreEnergy metabolism Glycolysis/gluconeogenesis ketose-bisphosphate aldolase (TIGR00167; HMM-score: 303.3)class II aldolase, tagatose bisphosphate family (TIGR01858; EC 4.1.2.-; HMM-score: 207.7)fructose-bisphosphate aldolase, class II, Calvin cycle subtype (TIGR01521; EC 4.1.2.13; HMM-score: 148.2)Energy metabolism Glycolysis/gluconeogenesis fructose-bisphosphate aldolase, class II (TIGR01520; EC 4.1.2.13; HMM-score: 112.6)glycosyl amidation-associated protein WbuZ (TIGR03572; HMM-score: 13.1)
- TheSEED: see SP70585_0667
- PFAM: TIM_barrel (CL0036) F_bP_aldolase; Fructose-bisphosphate aldolase class-II (PF01116; HMM-score: 319.2)and 1 moreCutC; CutC family (PF03932; HMM-score: 16.3)
⊟Structure, modifications & cofactors[edit | edit source]
- domains:
- modifications:
- cofactors:
- effectors:
⊟Localization[edit | edit source]
- PSORTb: Cytoplasmic
- Cytoplasmic Score: 7.5
- Cytoplasmic Membrane Score: 1.15
- Cellwall Score: 0.62
- Extracellular Score: 0.73
- Internal Helices: 0
- SignalP: no predicted signal peptide
- SP(Sec/SPI): 0.021749
- TAT(Tat/SPI): 0.001773
- LIPO(Sec/SPII): 0.001765
- predicted transmembrane helices (TMHMM): 0
⊟Accession numbers[edit | edit source]
- GI:
- RefSeq: WP_001019003 NCBI
- UniProt: see SP70585_0667
⊟Protein sequence[edit | edit source]
- MAIVSAEKFVQAARDNGYAVGGFNTNNLEWTQAILRAAEAKKAPVLIQTSMGAAKYMGGYKVARNLIANLVESMGITVPVAIHLDHGHYEDALECIEVGYTSIMFDGSHLPVEENLKLAKEVVEKAHAKGISVEAEVGTIGGEEDGIIGKGELAPIEDAKAMVETGIDFLAAGIGNIHGPYPVNWEGLDLDHLQKLTEALPGFPIVLHGGSGIPDEQIQAAIKLGVAKVNVNTECQIAFANATRKFARDYEANEAEYDKKKLFDPRKFLADGVKAIQASVEERIDVFGSEGKA
⊟Experimental data[edit | edit source]
- protein localization:
- interaction partners:
⊟Expression & Regulation[edit | edit source]
⊟Operon[edit | edit source]
- MicrobesOnline: no polycistronic organisation predicted
⊟Regulation[edit | edit source]
- regulator: CcpA, Rex* see SP70585_0667
⊟Expression data[edit | edit source]
- PneumoExpress for strain D39V: SPV_0526 PneumoExpress
⊟Biological Material[edit | edit source]
⊟Mutants[edit | edit source]
⊟Expression vector[edit | edit source]
⊟lacZ fusion[edit | edit source]
⊟GFP fusion[edit | edit source]
⊟two-hybrid system[edit | edit source]
⊟FLAG-tag construct[edit | edit source]
⊟Antibody[edit | edit source]
⊟Other Information[edit | edit source]
You are kindly invited to share additional interesting facts.