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PangenomeTIGR4
serotype 4
D39serotype 2
D39Vserotype 2
Hungary19A-6serotype 19A
EF3030serotype 19F
670-6Bserotype 6B
6A-10serotype 6A
70585serotype 5
A026serotype 19F
A66serotype 3
AP200serotype 11A
ASP0581serotype 12F
ATCC 49619serotype 19F
ATCC 700669serotype 23F
BVJ1JLserotype 1
CGSP14serotype 14
G54serotype 19F
HU-OHserotype 3
Hu15serotype 19A
Hu17serotype 19A
INV104serotype 1
INV200serotype 14
JJAserotype 14
MDRSPN001serotype 19F
NCTC7466serotype 2
NU83127serotype 4
OXC141serotype 3
P1031serotype 1
R6serotype 2
SP49serotype 19A
SPN032672serotype 1
SPN034156serotype 3
SPN034183serotype 3
SPN994038serotype 3
SPN994039serotype 3
SPNA45serotype 3
ST556serotype 19F
TCH8431/19Aserotype 19A
Taiwan19F-14serotype 19F
Xen35serotype 4
gamPNI0373serotype 1
NCBI: 17-JAN-2018
⊟Summary[edit | edit source]
- organism: Streptococcus pneumoniae AP200
- locus tag: SPAP_1878 [new locus tag: SPAP_RS09330 ]
- pan locus tag?: PNEUPAN003377000
- symbol: SPAP_1878
- pan gene symbol?: treP
- synonym:
- product: Phosphotransferase system IIC component, glucose/maltose/N-acetylglucosamine-specific
⊟Genome View[edit | edit source]
⊟Gene[edit | edit source]
⊟General[edit | edit source]
- type: CDS
- locus tag: SPAP_1878 [new locus tag: SPAP_RS09330 ]
- symbol: SPAP_1878
- product: Phosphotransferase system IIC component, glucose/maltose/N-acetylglucosamine-specific
- replicon: chromosome
- strand: -
- coordinates: 1767639..1769606
- length: 1968
- essential: unknown
⊟Accession numbers[edit | edit source]
- Location: CP002121 (1767639..1769606) NCBI
- BioCyc: see SPAP_RS09330
- MicrobesOnline:
- PneumoBrowse for strain D39V: SPV_1664 PneumoBrowse
⊟Phenotype[edit | edit source]
Share your knowledge and add information here. [edit]
⊟DNA sequence[edit | edit source]
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1921ATGGGAAAATTTGAACAAGAAGCCAAAGATCTGCTTCAGGCAATTGGAGGCAAAGAAAAT
GTGACTGCCGTAACTCACTGTGCGACACGGATGCGCTTTGTTTTAAGAGATGATAAGAAG
GCTAATGTTAAAGCTATCGAGTCAATTCCAGCTGTTAAAGGAACTTTTACAAATGCAGGT
CAATTTCAGGTAATCATTGGAAATGACGTGCCCATCTTTTATAATGATTTTACAGCCGTT
TCAGGTATTGAGGGTGTTTCCAAAGAAGCAACCAAGTCTGCAGCTAAGAGTAATCAAAAC
GTGGTTCAAGGTGTTATGACCACTCTGGCGGAAATCTTTACTCCGATTATTCCAGCCTTG
ATTGTTGGTGGATTGATCCTCGGTTTCCGTAATGTCTTGGAAGGTGTCCATTGGTCGATG
TTGGATGGCAAGACCATCACAGAATCCTCTCAGTTTTGGGCAGGGGTTAATCACTTCCTC
TGGTTGCCTGGTGAAGCTATCTTCCAGTTCTTACCAGTAGGGATTACTTGGTCTGTTTCT
CGTAAGATGGGAACCAGCCAAATTTTGGGAATTGTTCTCGGAATCTGTTTGGTATCGCCT
CAGTTGCTCAATGCCTATGCGGTTGCTTCAACGCCAGCAGCTGATATCGCGGCAAACTGG
GTTTGGAATTTTGGTTATTTTACTGTTAATCGTATTGGTTACCAAGTCCAAGTTATCCCA
GCCTTGCTTGCAGGTTTGAGTCTGTCTTATCTTGAAATTTTCTGGCGCAAACATATCCCA
GAAGTCATTTCCATGATTTTTGTACCTTTTTTGTCATTGATTCCAGCCTTGATTTTGGCT
CATACTGTTTTGGGACCAATCGGTTGGACAATTGGACAAGGACTTTCATCAGTTGTCTTG
GCAGGTTTAACTGGTCCAGTTAAATGGCTCTTCGGTGCAATTTTTGGTGCCCTCTACGCT
CCATTTGTCATCACAGGTCTGCACCATATGACCAATGCCATTGATACACAATTGATTGCG
GATGCTGGTGGCACTGCCCTATGGCCAATGATTGCTCTTTCTAATATTGCTCAAGGCTCA
GCCGTGTTTGCCTATTATTTCATGCATCGCCATGATGAGCGTGAGGCTCAGGTTTCACTT
CCTGCAACCATTTCAGCCTATCTCGGTGTTACAGAACCAGCTCTTTTTGGGGTTAACGTA
AAATATATTTATCCATTTGTTGCTGGGATGACTGGTTCAGCCCTTGCAGGCATGTTATCC
GTTACTTTTAATGTAACTGCGGCTTCTATTGGTATCGGTGGTTTGCCAGGTATTCTCTCT
ATTCAACCTCAATACATGCTGCCATTTGCAGGAACTATGCTAGTTGCGATTGTTGTTCCA
ATGCTCTTGACTTTCTTCTTCCGCAAGGCTGGTCTCTTTACAAAAACAGAGGGCGATACG
AACTTGCAGGCAGAATTCGTTGCTCAAGAAGAAGCAGAATTTGTGAACCATGAACCAGTA
GAACTTACTTCGGTAGAAATTATCAGCCCACTAACTGGCCAAGTGAAAGAATTGAGTCAA
GCGACGGATCCTATTTTTGCATCAGGTGTCATGGGGCAAGGTCTAGTCATTGAACCAAGC
CAAGGTGAGTTGACCTCTCCAGTTAATGGGACAGTGACGGTTCTTTTCCCTACCAAGCAT
GCCATCGGCATTGTCTCTGACGAGGGAGTTGAATTGCTCATCCACATCGGTATGGATACA
GTAGGTCTTGATGGCAAAGGTTTTGAAAGTCTTGTAGTCCAAGGAGATCACGTTACAGTT
GGTCAGCAACTGATTCGTTTTGATATGGATGTCATTAAGGCTGCAGGTCTGGTGACAGAA
ACTCCTGTTATCATCACCAACCAAGATGCTTATACAGCGACTATTCCCGGAACTTATCCG
ACAACGATCCAAGCTGGAGCATCTCTCATGGTCGCTACACGAATCTAA60
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⊟Protein[edit | edit source]
⊟General[edit | edit source]
- locus tag: SPAP_1878 [new locus tag: SPAP_RS09330 ]
- symbol: SPAP_1878
- description: Phosphotransferase system IIC component, glucose/maltose/N-acetylglucosamine-specific
- length: 655
- theoretical pI: 5.14274
- theoretical MW: 69960.8
- GRAVY: 0.494046
⊟Function[edit | edit source]
- ⊞TIGRFAM: PTS system, trehalose-specific IIBC component (TIGR01992; EC 2.7.1.69; HMM-score: 722.7)and 12 more
- ⊞TheSEED :
- PTS system, trehalose-specific IIA component (EC 2.7.1.69)
- PTS system, trehalose-specific IIB component (EC 2.7.1.69)
- PTS system, trehalose-specific IIC component (EC 2.7.1.69)
Carbohydrates Di- and oligosaccharides Trehalose Uptake and Utilization PTS system, trehalose-specific IIA component (EC 2.7.1.69)and 2 more - ⊞PFAM: Hybrid (CL0105) PTS_EIIA_1; phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 (PF00358; HMM-score: 161.3)and 3 more
⊟Structure, modifications & cofactors[edit | edit source]
- domains:
- modifications:
- cofactors:
- effectors:
⊟Localization[edit | edit source]
⊟Accession numbers[edit | edit source]
- GI:
- RefSeq: ADM85461 NCBI
- UniProt:
⊟Protein sequence[edit | edit source]
- MGKFEQEAKDLLQAIGGKENVTAVTHCATRMRFVLRDDKKANVKAIESIPAVKGTFTNAGQFQVIIGNDVPIFYNDFTAVSGIEGVSKEATKSAAKSNQNVVQGVMTTLAEIFTPIIPALIVGGLILGFRNVLEGVHWSMLDGKTITESSQFWAGVNHFLWLPGEAIFQFLPVGITWSVSRKMGTSQILGIVLGICLVSPQLLNAYAVASTPAADIAANWVWNFGYFTVNRIGYQVQVIPALLAGLSLSYLEIFWRKHIPEVISMIFVPFLSLIPALILAHTVLGPIGWTIGQGLSSVVLAGLTGPVKWLFGAIFGALYAPFVITGLHHMTNAIDTQLIADAGGTALWPMIALSNIAQGSAVFAYYFMHRHDEREAQVSLPATISAYLGVTEPALFGVNVKYIYPFVAGMTGSALAGMLSVTFNVTAASIGIGGLPGILSIQPQYMLPFAGTMLVAIVVPMLLTFFFRKAGLFTKTEGDTNLQAEFVAQEEAEFVNHEPVELTSVEIISPLTGQVKELSQATDPIFASGVMGQGLVIEPSQGELTSPVNGTVTVLFPTKHAIGIVSDEGVELLIHIGMDTVGLDGKGFESLVVQGDHVTVGQQLIRFDMDVIKAAGLVTETPVIITNQDAYTATIPGTYPTTIQAGASLMVATRI
⊟Experimental data[edit | edit source]
- protein localization:
- interaction partners:
⊟Expression & Regulation[edit | edit source]
⊟Operon[edit | edit source]
⊟Regulation[edit | edit source]
- data available for TIGR4
⊟Expression data[edit | edit source]
- PneumoExpress for strain D39V: SPV_1664 PneumoExpress