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PangenomeTIGR4
serotype 4
D39serotype 2
D39Vserotype 2
Hungary19A-6serotype 19A
EF3030serotype 19F
670-6Bserotype 6B
6A-10serotype 6A
70585serotype 5
A026serotype 19F
A66serotype 3
AP200serotype 11A
ASP0581serotype 12F
ATCC 49619serotype 19F
ATCC 700669serotype 23F
BM6001serotype 19F
BVJ1JLserotype 1
CGSP14serotype 14
G54serotype 19F
HU-OHserotype 3
Hu15serotype 19A
Hu17serotype 19A
INV104serotype 1
INV200serotype 14
JJAserotype 14
MDRSPN001serotype 19F
NCTC7465serotype 1
NCTC7466serotype 2
NU83127serotype 4
OXC141serotype 3
P1031serotype 1
R6serotype 2
SP49serotype 19A
SPN032672serotype 1
SPN034156serotype 3
SPN034183serotype 3
SPN994038serotype 3
SPN994039serotype 3
SPNA45serotype 3
ST556serotype 19F
TCH8431/19Aserotype 19A
Taiwan19F-14serotype 19F
Xen35serotype 4
gamPNI0373serotype 1
NCBI: 22-FEB-2023
⊟Summary[edit | edit source]
- organism: Streptococcus pneumoniae AP200
- locus tag: SPAP_RS05695 [old locus tag: SPAP_1150 ]
- pan locus tag?: PNEUPAN002093000
- symbol: SPAP_RS05695
- pan gene symbol?: —
- synonym:
- product: ADP-ribosylglycohydrolase family protein
⊟Genome View[edit | edit source]
⊟Gene[edit | edit source]
⊟General[edit | edit source]
- type: CDS
- locus tag: SPAP_RS05695 [old locus tag: SPAP_1150 ]
- symbol: SPAP_RS05695
- product: ADP-ribosylglycohydrolase family protein
- replicon: chromosome
- strand: -
- coordinates: 1092934..1093788
- length: 855
- essential: unknown
⊟Accession numbers[edit | edit source]
- Location: NC_014494 (1092934..1093788) NCBI
- BioCyc: SPAP_RS05695 BioCyc
- MicrobesOnline:
- PneumoBrowse for strain D39V: SPV_0925 PneumoBrowse
⊟Phenotype[edit | edit source]
Share your knowledge and add information here. [edit]
⊟DNA sequence[edit | edit source]
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841ATGCTTGGAGCAATTATTGGAGATATTGTCGGTTCTGTTTACGAATGGAACAATATCAAA
ACAAAGGACTTTCCTTTATTTCGGAAGGACTGCTTTTTTACAGATGACACGGTTATGACC
TGTGCTGTTGCAGAAGCAATTATGAATGGTGGACAAAAAGACGACTTCATTGACGCGATG
AAGAAATATGGCAGAATGTATCCGAATGCTGATTACGGTGCTCGGTTTAATGCATGGCTA
AACAGCGATAACCGTGAGCCTTATAATAGCTTTGGGAATGGATCAGCTATGCGTATTTCT
CCATGTGCTTGGATCATGGACTGTGGTTTTTATGCGAAAACTGGTATATGGCCATCATCT
AGAGGACTTACGAGTCTTTCTGCAGAGGTAACTCATAATCATCCAGAAGGTGTCAAAGGC
GCTATGGCTACAGCTGATGCTATCTTTCTATGTCGTTTTTACTTTGGTGGTTATTGTAGA
GAGTACGAGCAATCAATTAACGACAATCCTACAGAGTGTAAAAGACGAATTAAGGATTAT
ATAGAAAAAGAATACGATTACAATCTATCTCAAACTTTAGATGAAATCCGTCCTAACTAT
CGTTTTAACGAAACATGTCAGGAAACTGTCCCTCAAGCCACTATCGCCTTTCTTGAAAGT
AGAGACTTCGAAGATGCGATAAGAAATGCCATCTCACTTGGTGGCGACAGTGATACTCTC
GCAGCAATCACTTGTAGCATAGCAGAGGCAGCTTACGGTATTCCTGATTGGATCAAGGAT
AAGGCCTATTCTTACTTGGATGAACCCTTAAAGGATGTAGTTAGGCGATGGGAAAATAGA
ATAAAAGCGTATTAA60
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⊟Protein[edit | edit source]
⊟General[edit | edit source]
- locus tag: SPAP_RS05695 [old locus tag: SPAP_1150 ]
- symbol: SPAP_RS05695
- description: ADP-ribosylglycohydrolase family protein
- length: 284
- theoretical pI: 4.62506
- theoretical MW: 32300.1
- GRAVY: -0.45669
⊟Function[edit | edit source]
- TIGRFAM: Central intermediary metabolism Nitrogen fixation ADP-ribosyl-[dinitrogen reductase] hydrolase (TIGR02662; EC 3.2.2.24; HMM-score: 39)
- TheSEED: see SPAP_1150
- PFAM: no clan defined ADP_ribosyl_GH; ADP-ribosylglycohydrolase (PF03747; HMM-score: 103.6)
⊟Structure, modifications & cofactors[edit | edit source]
- domains:
- modifications:
- cofactors:
- effectors:
⊟Localization[edit | edit source]
- PSORTb: Cytoplasmic
- Cytoplasmic Score: 7.5
- Cytoplasmic Membrane Score: 1.15
- Cellwall Score: 0.62
- Extracellular Score: 0.73
- Internal Helices: 0
- DeepLocPro: Cytoplasmic
- Cytoplasmic Score: 0.5962
- Cytoplasmic Membrane Score: 0.1188
- Cell wall & surface Score: 0.0002
- Extracellular Score: 0.2847
- SignalP: no predicted signal peptide
- SP(Sec/SPI): 0.01807
- TAT(Tat/SPI): 0.000214
- LIPO(Sec/SPII): 0.001429
- predicted transmembrane helices (TMHMM): 0
⊟Accession numbers[edit | edit source]
- GI:
- RefSeq: WP_000900018 NCBI
- UniProt:
⊟Protein sequence[edit | edit source]
- MLGAIIGDIVGSVYEWNNIKTKDFPLFRKDCFFTDDTVMTCAVAEAIMNGGQKDDFIDAMKKYGRMYPNADYGARFNAWLNSDNREPYNSFGNGSAMRISPCAWIMDCGFYAKTGIWPSSRGLTSLSAEVTHNHPEGVKGAMATADAIFLCRFYFGGYCREYEQSINDNPTECKRRIKDYIEKEYDYNLSQTLDEIRPNYRFNETCQETVPQATIAFLESRDFEDAIRNAISLGGDSDTLAAITCSIAEAAYGIPDWIKDKAYSYLDEPLKDVVRRWENRIKAY
⊟Experimental data[edit | edit source]
- protein localization:
- interaction partners:
⊟Expression & Regulation[edit | edit source]
⊟Operon[edit | edit source]
⊟Regulation[edit | edit source]
- regulator:
⊟Transcription[edit | edit source]
- transcription start site:
⊟Expression data[edit | edit source]
- PneumoExpress for strain D39V: SPV_0925 PneumoExpress
⊟Biological Material[edit | edit source]
⊟Mutants[edit | edit source]
⊟Expression vector[edit | edit source]
⊟lacZ fusion[edit | edit source]
⊟GFP fusion[edit | edit source]
⊟two-hybrid system[edit | edit source]
⊟FLAG-tag construct[edit | edit source]
⊟Antibody[edit | edit source]
⊟Other Information[edit | edit source]
You can add further information about the gene and protein here. [edit]