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Hu15
serotype 19A
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serotype 14
JJA
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MDRSPN001
serotype 19F
NCTC7466
serotype 2
NU83127
serotype 4
OXC141
serotype 3
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SPN032672
serotype 1
SPN034156
serotype 3
SPN034183
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SPN994038
serotype 3
SPN994039
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SPNA45
serotype 3
ST556
serotype 19F
TCH8431/19A
serotype 19A
Taiwan19F-14
serotype 19F
Xen35
serotype 4
gamPNI0373
serotype 1

NCBI: 30-JAN-2014

⊟Summary[edit | edit source]

  • organism: Streptococcus pneumoniae CGSP14
  • locus tag: SPCG_0700 [new locus tag: SPCG_RS03655 ]
  • pan locus tag?: PNEUPAN001712000
  • symbol: SPCG_0700
  • pan gene symbol?: livH
  • synonym:
  • product: branched-chain amino acid ABC transporter, permease protein

⊟Genome View[edit | edit source]

⊟Gene[edit | edit source]

⊟General[edit | edit source]

  • type: CDS
  • locus tag: SPCG_0700 [new locus tag: SPCG_RS03655 ]
  • symbol: SPCG_0700
  • product: branched-chain amino acid ABC transporter, permease protein
  • replicon: chromosome
  • strand: +
  • coordinates: 696232..697110
  • length: 879
  • essential: unknown

⊟Accession numbers[edit | edit source]

⊟Phenotype[edit | edit source]

Share your knowledge and add information here. [edit]

⊟DNA sequence[edit | edit source]

  • 1
    61
    121
    181
    241
    301
    361
    421
    481
    541
    601
    661
    721
    781
    841
    GTGAATCTTATGCTCCAACAACTCGTAAATGGTTTGATTCTAGGTAGTGTTTACGCGCTG
    TTAGCCCTAGGATATACCATGGTTTACGGAATTATCAAGCTCATCAACTTCGCCCATGGT
    GATATTTATATGATGGGAGCCTTTATCGGTTATTTCTTGATCAATTCTTTCCAAATGAAT
    TTCTTTGTAGCGCTTATTGTAGCTATGCTAGCGACAGCTATTCTTGGTGTCGTGATTGAG
    TTTCTTGCTTACCGACCTTTGCGCCACTCTACTCGTATTGCTGTTTTGATTACGGCTATT
    GGGATTTCTTTCCTATTGGAGTATGGAATGGTCTATCTGGTTGGTGCCAATACCCGTGCC
    TTCCCTCAAGCGATTCAAACAGTTCGATATGATTTGGGACCAATTAGCTTAACAAATGTG
    CAGTTAATGATTTTGGGCATTTCCTTGATTTTGATGATTTTGTTACAAGTCATTGTCCAA
    AAGACTAAGATGGGGAAAGCCATGCGTGCAGTATCAGTAGATAGCGACGCGGCGCAATTG
    ATGGGGATCAATGTAAACCGTACGATTAGCTTTACCTTCGCTTTGGGTTCTGCTCTTGCG
    GGTGCGGCTGGTGTTCTGATTGCTCTTTATTATAACTCTCTTGAGCCTTTGATGGGGGTT
    ACTCCAGGTCTTAAATCTTTCGTTGCCGCAGTACTTGGTGGTATCGGAATTATTCCTGGT
    GCGGCTCTTGGTGGCTTTGTGATTGGTCTATTGGAAACCTTTGCGACAGCCTTTGGGATG
    TCAGATTTCCGTGATGCCATTGTTTATGGAATCTTGTTGTTGATCTTGATTGTCCGCCCA
    GCTGGTATCCTTGGTAAGAATGTGAAAGAGAAGGTGTAA
    60
    120
    180
    240
    300
    360
    420
    480
    540
    600
    660
    720
    780
    840
    879

⊟Protein[edit | edit source]

⊟General[edit | edit source]

  • locus tag: SPCG_0700 [new locus tag: SPCG_RS03655 ]
  • symbol: SPCG_0700
  • description: branched-chain amino acid ABC transporter, permease protein
  • length: 292
  • theoretical pI: 9.83867
  • theoretical MW: 31208.5
  • GRAVY: 1.06336

⊟Function[edit | edit source]

  • TIGRFAM:
    Metabolism Transport and binding proteins Amino acids, peptides and amines urea ABC transporter, permease protein UrtB (TIGR03409; HMM-score: 150.2)
    and 4 more
    urea ABC transporter, permease protein UrtB (TIGR03622; HMM-score: 100.6)
    Metabolism Transport and binding proteins Amino acids, peptides and amines urea ABC transporter, permease protein UrtC (TIGR03408; HMM-score: 34.7)
    urea ABC transporter, permease protein UrtC (TIGR03727; HMM-score: 27.7)
    Metabolism Energy metabolism Electron transport cyd operon protein YbgT (TIGR02106; HMM-score: 9.5)
  • TheSEED  :
    • High-affinity branched-chain amino acid transport system permease protein LivH (TC 3.A.1.4.1)
    Membrane Transport ABC transporters ABC transporter branched-chain amino acid (TC 3.A.1.4.1)  High-affinity branched-chain amino acid transport system permease protein LivH (TC 3.A.1.4.1)
  • PFAM:
    Membrane_trans (CL0142) BPD_transp_2; Branched-chain amino acid transport system / permease component (PF02653; HMM-score: 173.7)
    and 2 more
    FecCD; FecCD transport family (PF01032; HMM-score: 27.5)
    no clan defined COX14; Cytochrome oxidase c assembly (PF14880; HMM-score: 7.3)

⊟Structure, modifications & cofactors[edit | edit source]

  • domains:
  • modifications:
  • cofactors:
  • effectors:

⊟Localization[edit | edit source]

  • PSORTb: Cytoplasmic Membrane
    • Cytoplasmic Score: 0
    • Cytoplasmic Membrane Score: 10
    • Cellwall Score: 0
    • Extracellular Score: 0
    • Internal Helices: 9
  • SignalP: no predicted signal peptide
    • SP(Sec/SPI): 0.003252
    • TAT(Tat/SPI): 0.000181
    • LIPO(Sec/SPII): 0.017217
  • predicted transmembrane helices (TMHMM): 8

⊟Accession numbers[edit | edit source]

⊟Protein sequence[edit | edit source]

  • MNLMLQQLVNGLILGSVYALLALGYTMVYGIIKLINFAHGDIYMMGAFIGYFLINSFQMNFFVALIVAMLATAILGVVIEFLAYRPLRHSTRIAVLITAIGISFLLEYGMVYLVGANTRAFPQAIQTVRYDLGPISLTNVQLMILGISLILMILLQVIVQKTKMGKAMRAVSVDSDAAQLMGINVNRTISFTFALGSALAGAAGVLIALYYNSLEPLMGVTPGLKSFVAAVLGGIGIIPGAALGGFVIGLLETFATAFGMSDFRDAIVYGILLLILIVRPAGILGKNVKEKV

⊟Experimental data[edit | edit source]

  • protein localization:
  • interaction partners:

⊟Expression & Regulation[edit | edit source]

⊟Operon[edit | edit source]

⊟Regulation[edit | edit source]

  • regulators: CcpA regulon, CodY (activation (repression)) regulon
    CcpA(TF)important in Global catabolite repression; RegPrecise    transcription unit transferred from TIGR4 data RegPrecise 
    CodY(TF)important in Amino acid metabolism; RegPrecise    transcription unit transferred from TIGR4 data RegPrecise 

⊟Expression data[edit | edit source]

⊟Biological Material[edit | edit source]

⊟Mutants[edit | edit source]

⊟Expression vector[edit | edit source]

⊟lacZ fusion[edit | edit source]

⊟GFP fusion[edit | edit source]

⊟two-hybrid system[edit | edit source]

⊟FLAG-tag construct[edit | edit source]

⊟Antibody[edit | edit source]

⊟Other Information[edit | edit source]

You are kindly invited to share additional interesting facts.

⊟Literature[edit | edit source]

⊟References[edit | edit source]

⊟Relevant publications[edit | edit source]

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