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PangenomeTIGR4
serotype 4
D39serotype 2
D39Vserotype 2
Hungary19A-6serotype 19A
EF3030serotype 19F
670-6Bserotype 6B
6A-10serotype 6A
70585serotype 5
A026serotype 19F
A66serotype 3
AP200serotype 11A
ASP0581serotype 12F
ATCC 49619serotype 19F
ATCC 700669serotype 23F
BVJ1JLserotype 1
CGSP14serotype 14
G54serotype 19F
HU-OHserotype 3
Hu15serotype 19A
Hu17serotype 19A
INV104serotype 1
INV200serotype 14
JJAserotype 14
MDRSPN001serotype 19F
NCTC7466serotype 2
NU83127serotype 4
OXC141serotype 3
P1031serotype 1
R6serotype 2
SP49serotype 19A
SPN032672serotype 1
SPN034156serotype 3
SPN034183serotype 3
SPN994038serotype 3
SPN994039serotype 3
SPNA45serotype 3
ST556serotype 19F
TCH8431/19Aserotype 19A
Taiwan19F-14serotype 19F
Xen35serotype 4
gamPNI0373serotype 1
NCBI: 24-JAN-2021
⊟Summary[edit | edit source]
- organism: Streptococcus pneumoniae CGSP14
- locus tag: SPCG_RS11300 [old locus tag: SPCG_2137 ]
- pan locus tag?: PNEUPAN003872000
- symbol: adcA
- pan gene symbol?: adcA
- synonym:
- product: zinc ABC transporter substrate-binding lipoprotein AdcA
⊟Genome View[edit | edit source]
⊟Gene[edit | edit source]
⊟General[edit | edit source]
- type: CDS
- locus tag: SPCG_RS11300 [old locus tag: SPCG_2137 ]
- symbol: adcA
- product: zinc ABC transporter substrate-binding lipoprotein AdcA
- replicon: chromosome
- strand: -
- coordinates: 2136592..2138097
- length: 1506
- essential: unknown
⊟Accession numbers[edit | edit source]
- Location: NC_010582 (2136592..2138097) NCBI
- BioCyc: SPCG_RS11300 BioCyc
- MicrobesOnline: see SPCG_2137
- PneumoBrowse for strain D39V: SPV_1997 PneumoBrowse
⊟Phenotype[edit | edit source]
Share your knowledge and add information here. [edit]
⊟DNA sequence[edit | edit source]
- 1
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1501GTGAAAAAAATTAGCTTATTACTAGCCAGTCTATGTGCCTTGTTTTTAGTGGCTTGTTCC
AATCAAAAACAGGCAGATGGTAAACTCAATATCGTGACAACCTTTTACCCTGTCTATGAA
TTTACCAAGCAAGTTGCAGGAGATACGGCTAATGTAGAACTCCTAATCGGTGCTGGGACA
GAACCTCATGAATACGAACCATCTGCCAAGGCAGTTGCCAAAATCCAAGATGCAGATACC
TTCGTTTATGAAAATGAAAACATGGAAACATGGGTACCTAAATTGCTAGATACCTTGGAT
AAGAAAAAAGTGAAAACCATCAAGGCGACAGGCGATATGTTGCTCTTGCCAGGTGGCGAG
GAAGAAGAGGGAGACCATGACCATGGAGAAGAAGGTCATCACCATGAGTTTGACCCCCAT
GTTTGGTTATCACCAGTTCGTGCCATTAAACTAGTAGAGCACATCCGCGACAGCTTGTCA
GCAGATTATCCTGATAAAAAAGAGACCTTTGAGAAGAATGCAGCTGCCTATATCGAAAAA
TTGCAAGCCTTGGATAAGGCTTACACAGAAGGCTTGTCTCAAGCAAAACAAAAGAGCTTT
GTGACTCAACACGCAGCCTTTAACTATCTTGCCTTGGACTATGGACTCAAACAAGTCGCA
ATCTCAGGCCTTTCTCCAGATGCAGAGCCATCAGCTGCTCGCTTGGCAGAATTGACAGAG
TATGTCAAGAAAAATAAAATCGCCTATATCTATTTTGAAGAAAATGCCTCACAAGCCCTT
GCTAACACACTTTCAAAAGAAGCAGGTGTCAAAACTGATGTCCTCAATCCTTTAGAAAGT
CTGACAGAAGAGGACACCAAGGCTGGAGAAAACTACATTTCCGTGATGGAGAAAAACCTC
AAGGCTTTGAAACAAACAACAGACCAAGAAGGCCCAGCAATCGAACCTGAAAAGGCAGAG
GATACCAAGACAGTCCAAAATGGTTACTTCGAGGATGCAGCTGTCAAGGACCGCACCTTG
AGTGACTATGCAGGTAACTGGCAATCAGTTTATCCTTTCCTTGAAGACGGCACGTTTGAC
CAAGTCTTTGACTACAAGGCTAAGTTGACTGGTAAGATGACCCAGGCTGAGTACAAGGCT
TACTATACAAAAGGCTATCAGACAGATGTGACTAAGATTAACATTACTGATAATACTATG
GAATTTGTTCAAGGTGGACAAAGCAAGAAATACACTTACAAGTATGTCGGTAAGAAAATT
TTGACTTACAAGAAAGGCAATCGTGGCGTGCGTTTCCTCTTTGAAGCCACAGATGCTGAC
GCTGGACAATTCAAGTATGTTCAGTTTAGTGACCACAATATCGCCCCAGTTAAGGCAGAA
CATTTCCATATCTTTTTTGGAGGTACAAGCCAAGAAACTCTATTTGAAGAAATGGATAAT
TGGCCAACCTACTACCCAGATAACCTATCTGGCCAAGAAATCGCCCAAGAAATGTTGGCG
CATTGA60
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⊟Protein[edit | edit source]
⊟General[edit | edit source]
- locus tag: SPCG_RS11300 [old locus tag: SPCG_2137 ]
- symbol: AdcA
- description: zinc ABC transporter substrate-binding lipoprotein AdcA
- length: 501
- theoretical pI: 4.80636
- theoretical MW: 56285.6
- GRAVY: -0.562675
⊟Function[edit | edit source]
- TIGRFAM: Transport and binding proteins Unknown substrate anchored repeat ABC transporter, substrate-binding protein (TIGR03772; HMM-score: 106.3)
- TheSEED: see SPCG_2137
- PFAM: Calycin (CL0116) ZinT; ZinT (YodA) periplasmic lipocalin-like zinc-recruitment (PF09223; HMM-score: 288.5)Chelatase (CL0043) ZnuA; Zinc-uptake complex component A periplasmic (PF01297; HMM-score: 256.8)
⊟Structure, modifications & cofactors[edit | edit source]
- domains:
- modifications:
- cofactors:
- effectors:
⊟Localization[edit | edit source]
- PSORTb: Cytoplasmic Membrane
- Cytoplasmic Score: 0.17
- Cytoplasmic Membrane Score: 9.51
- Cellwall Score: 0.16
- Extracellular Score: 0.15
- Internal Helices: 0
- SignalP: Signal peptide LIPO(Sec/SPII) length 18 aa
- SP(Sec/SPI): 0.002123
- TAT(Tat/SPI): 0.000062
- LIPO(Sec/SPII): 0.997603
- Cleavage Site: CS pos: 18-19. LVA-CS. Pr: 0.9981
- predicted transmembrane helices (TMHMM): 0
⊟Accession numbers[edit | edit source]
⊟Protein sequence[edit | edit source]
- MKKISLLLASLCALFLVACSNQKQADGKLNIVTTFYPVYEFTKQVAGDTANVELLIGAGTEPHEYEPSAKAVAKIQDADTFVYENENMETWVPKLLDTLDKKKVKTIKATGDMLLLPGGEEEEGDHDHGEEGHHHEFDPHVWLSPVRAIKLVEHIRDSLSADYPDKKETFEKNAAAYIEKLQALDKAYTEGLSQAKQKSFVTQHAAFNYLALDYGLKQVAISGLSPDAEPSAARLAELTEYVKKNKIAYIYFEENASQALANTLSKEAGVKTDVLNPLESLTEEDTKAGENYISVMEKNLKALKQTTDQEGPAIEPEKAEDTKTVQNGYFEDAAVKDRTLSDYAGNWQSVYPFLEDGTFDQVFDYKAKLTGKMTQAEYKAYYTKGYQTDVTKINITDNTMEFVQGGQSKKYTYKYVGKKILTYKKGNRGVRFLFEATDADAGQFKYVQFSDHNIAPVKAEHFHIFFGGTSQETLFEEMDNWPTYYPDNLSGQEIAQEMLAH
⊟Experimental data[edit | edit source]
- protein localization:
- interaction partners:
⊟Expression & Regulation[edit | edit source]
⊟Operon[edit | edit source]
⊟Regulation[edit | edit source]
- regulator: AdcR see SPCG_2137
⊟Expression data[edit | edit source]
- PneumoExpress for strain D39V: SPV_1997 PneumoExpress
⊟Biological Material[edit | edit source]
⊟Mutants[edit | edit source]
⊟Expression vector[edit | edit source]
⊟lacZ fusion[edit | edit source]
⊟GFP fusion[edit | edit source]
⊟two-hybrid system[edit | edit source]
⊟FLAG-tag construct[edit | edit source]
⊟Antibody[edit | edit source]
⊟Other Information[edit | edit source]
You are kindly invited to share additional interesting facts.
⊟Literature[edit | edit source]
⊟References[edit | edit source]
⊟Relevant publications[edit | edit source]
Charles D Plumptre, Bart A Eijkelkamp, Jacqueline R Morey, Felix Behr, Rafael M Couñago, Abiodun D Ogunniyi, Bostjan Kobe, Megan L O'Mara, James C Paton, Christopher A McDevitt
AdcA and AdcAII employ distinct zinc acquisition mechanisms and contribute additively to zinc homeostasis in Streptococcus pneumoniae.
Mol Microbiol: 2014, 91(4);834-51
[PubMed:24428621] [WorldCat.org] [DOI] (I p)