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PangenomeTIGR4
serotype 4
D39
serotype 2
D39V
serotype 2
Hungary19A-6
serotype 19A
EF3030
serotype 19F
670-6B
serotype 6B
6A-10
serotype 6A
70585
serotype 5
A026
serotype 19F
A66
serotype 3
AP200
serotype 11A
ASP0581
serotype 12F
ATCC 49619
serotype 19F
ATCC 700669
serotype 23F
BM6001
serotype 19F
BVJ1JL
serotype 1
CGSP14
serotype 14
G54
serotype 19F
HU-OH
serotype 3
Hu15
serotype 19A
Hu17
serotype 19A
INV104
serotype 1
INV200
serotype 14
JJA
serotype 14
MDRSPN001
serotype 19F
NCTC7465
serotype 1
NCTC7466
serotype 2
NU83127
serotype 4
OXC141
serotype 3
P1031
serotype 1
R6
serotype 2
SP49
serotype 19A
SPN032672
serotype 1
SPN034156
serotype 3
SPN034183
serotype 3
SPN994038
serotype 3
SPN994039
serotype 3
SPNA45
serotype 3
ST556
serotype 19F
TCH8431/19A
serotype 19A
Taiwan19F-14
serotype 19F
Xen35
serotype 4
gamPNI0373
serotype 1

NCBI: 21-MAR-2025

⊟Summary[edit | edit source]

  • organism: Streptococcus pneumoniae D39
  • locus tag: SPD_RS06300 [old locus tag: SPD_1178 ]
  • pan locus tag?: PNEUPAN000001000
  • symbol: SPD_RS06300
  • pan gene symbol?: ptrB
  • synonym:
  • product: prolyl oligopeptidase family serine peptidase

⊟Genome View[edit | edit source]

⊟Gene[edit | edit source]

⊟General[edit | edit source]

  • type: CDS
  • locus tag: SPD_RS06300 [old locus tag: SPD_1178 ]
  • symbol: SPD_RS06300
  • product: prolyl oligopeptidase family serine peptidase
  • replicon: chromosome
  • strand: -
  • coordinates: 1207584..1209524
  • length: 1941
  • essential: unknown

⊟Accession numbers[edit | edit source]

  • Location: NC_008533 (1207584..1209524) NCBI
  • BioCyc: G1G6V-1290 BioCyc
  • MicrobesOnline: see SPD_1178
  • PneumoBrowse for strain D39V: SPV_1178 PneumoBrowse

⊟Phenotype[edit | edit source]

Share your knowledge and add information here. [edit]

⊟DNA sequence[edit | edit source]

  • 1
    61
    121
    181
    241
    301
    361
    421
    481
    541
    601
    661
    721
    781
    841
    901
    961
    1021
    1081
    1141
    1201
    1261
    1321
    1381
    1441
    1501
    1561
    1621
    1681
    1741
    1801
    1861
    1921
    GTGAATCAGAGTAATGAAATATTTTTAAATACAATACAGGAAAAAACACACTATAAGAGG
    TCTATCTCTTCATCATTTCAGGAATTAAAAAAATGGAATTCTTTGATATTTAGGAGAGGG
    CGATATTGGTACCAATTTGATAATTGGAGTATACCCAATACTGGTGTAATAAAGGAATGG
    TATGTCGAAGATAATGACTGGATTCCTAAGGTTAGTTCTTCCAGTTTAGACAATTCAAAT
    TCACTTAAAATTGTCTTTGATGTGGAAAAATATACTTTGCCAGATGATAGTATCTTACAG
    GATGTTAGGATTTCATCTGATGAGAGTTATATAGTTTTGGTTGTATCCTCACTGCGTAGC
    ACTAATTTAATTGGAATAAAAAAATATACTATGGAAGAGTTATTTATCATTGAAGATATT
    TCAGTAGAAAGTTCGTTCTATTTGGGTAAATTCGGTGTTATGTATACTTGCTCCAAAGAG
    TACGGGAGGCCAAGTAAGTTATTCTATAAATCTTTTGATAGCTTTACAGAAGAGGAACTG
    TTTGAAGAAAACGAATGCTCTTTTCGATTAAAAATAGTCCACATTGATAGCAATAATTGT
    TTTGTAAAGTCAGTAGACTTTCAGAAAGGCAGGATTTTTCTATACAGTTTCGACCGGACG
    GGTTTTGTTAGACACTCTTACACAGAAACGGTAGCCCCAACACCTAGAGATATCGCTCTA
    TTTAGTACAGAAAAAGCACAGTACTTTCTTGGGATCTCTTCAACTGAAGAAAAGAAAGAT
    CAACTAATTCTAAGGGAAACTTCTTCGGGAGACAGAGTTTCTATTACTATACCATATCAA
    GATAGGGCTAGAAGAGTTCACTGTATAGGACGTTATATCCTTTTAGACTGTTCAAACGCA
    GCGAATTCCGTCTTTTATCTTGCTACATTTAAAAATAATAGTTTGAGGGAGTTGAGTGTT
    AATAAGATAACATTTGATGAAAAGACAACACTTTATGAAAATTCATTTTCTGATCGTGTT
    CTTCTGTTTTTAGAGAGGAGAACTTTTTACGAAAAAATACTTAGTTTTGATTTAATAGAA
    AATACATTAAAAACTGAATTTGAAAGACCCATCATAAAATCGAATAATACTAAATATTTT
    TCTAAGGTGATTTGGACTAAAAAAGATAGTTATGATGTAAGCATACCGATTTCTTTATTT
    TGGAAAAGTGAAGATACGGATGAGCTCCCAAGAAGAAAAAAATGTATTCTAAGTGTCTAT
    GGGGCTTATGGTAAGAATGATAATTCTGATTTAGATGAAATTATGTTATCTATAATAGAT
    GCAGGTTTTATTTATGCTATAGTTCATGTAAGAGGTGGAGGCTATTTGGGTGGTGAATGG
    TATCGCTCAGGAAAGGCGTTAAACAAATGGAATTCTATCAGAGATTTTATTGAGGGAGTA
    AATTATTTAAGGGAAAATGATGTAATTGACAGTAAGCGATTAGGTTTAATAACTTCTAGT
    GCAGGTGGAATAATTGCTGGTGCGGTGTTGAACGAGGAAAAAAATTTATTGCAAAGCATT
    CTCTTATTTTCGCCATTTATAAATCCTTATGATACACTTCAGAATCCAAATGATCCTCTT
    TCTAAGACCGAAATAGCAGAGTGGGGAGATATTAGAGACCCTGAAGTAAAGGCTTATATA
    AAGTCATATTCGCCTATGCAAAATATTGAAAAGGCACGAGACTCAAATACTGTTATAGTT
    AATATTTTGGGTGAGAAAGACCCATATATTAATAATAACGAAGTGATAGAGTGGTCAAAG
    AAATTAAATTCTATTGGAGTTAAAAGTTTGTTGTATTTAAACAAAGCAGCTGGTCATGGA
    GGTTTTACTCCATCAGATGTTCTCTTAATGATTGATACTTTAAATTATTTCTTTGAAGAA
    GTGGGAAGGAATAACTTATGA
    60
    120
    180
    240
    300
    360
    420
    480
    540
    600
    660
    720
    780
    840
    900
    960
    1020
    1080
    1140
    1200
    1260
    1320
    1380
    1440
    1500
    1560
    1620
    1680
    1740
    1800
    1860
    1920
    1941

⊟Protein[edit | edit source]

⊟General[edit | edit source]

  • locus tag: SPD_RS06300 [old locus tag: SPD_1178 ]
  • symbol: SPD_RS06300
  • description: prolyl oligopeptidase family serine peptidase
  • length: 646
  • theoretical pI: 5.41321
  • theoretical MW: 74640.9
  • GRAVY: -0.361765

⊟Function[edit | edit source]

  • TIGRFAM:
  • TheSEED: see SPD_1178
  • PFAM:
    AB_hydrolase (CL0028) Peptidase_S9; Prolyl oligopeptidase family (PF00326; HMM-score: 105.8)
    and 6 more
    DLH; Dienelactone hydrolase family (PF01738; HMM-score: 23.1)
    Peptidase_S15; X-Pro dipeptidyl-peptidase (S15 family) (PF02129; HMM-score: 19.2)
    Abhydrolase_3; alpha/beta hydrolase fold (PF07859; HMM-score: 16.2)
    FSH1; Serine hydrolase (FSH1) (PF03959; HMM-score: 15.2)
    HTH (CL0123) YjcQ; YjcQ protein (PF09639; HMM-score: 14)
    AB_hydrolase (CL0028) Hydrolase_4; Serine aminopeptidase, S33 (PF12146; HMM-score: 12.3)

⊟Structure, modifications & cofactors[edit | edit source]

  • domains:
  • modifications:
  • cofactors:
  • effectors:

⊟Localization[edit | edit source]

  • PSORTb: Cytoplasmic Membrane
    • Cytoplasmic Score: 0.32
    • Cytoplasmic Membrane Score: 9.55
    • Cellwall Score: 0.12
    • Extracellular Score: 0.01
    • Internal Helices: 0
  • DeepLocPro: Extracellular
    • Cytoplasmic Score: 0.2966
    • Cytoplasmic Membrane Score: 0.0096
    • Cell wall & surface Score: 0.0024
    • Extracellular Score: 0.6914
  • SignalP: no predicted signal peptide
    • SP(Sec/SPI): 0.005909
    • TAT(Tat/SPI): 0.001053
    • LIPO(Sec/SPII): 0.001646
  • predicted transmembrane helices (TMHMM): 0

⊟Accession numbers[edit | edit source]

⊟Protein sequence[edit | edit source]

  • MNQSNEIFLNTIQEKTHYKRSISSSFQELKKWNSLIFRRGRYWYQFDNWSIPNTGVIKEWYVEDNDWIPKVSSSSLDNSNSLKIVFDVEKYTLPDDSILQDVRISSDESYIVLVVSSLRSTNLIGIKKYTMEELFIIEDISVESSFYLGKFGVMYTCSKEYGRPSKLFYKSFDSFTEEELFEENECSFRLKIVHIDSNNCFVKSVDFQKGRIFLYSFDRTGFVRHSYTETVAPTPRDIALFSTEKAQYFLGISSTEEKKDQLILRETSSGDRVSITIPYQDRARRVHCIGRYILLDCSNAANSVFYLATFKNNSLRELSVNKITFDEKTTLYENSFSDRVLLFLERRTFYEKILSFDLIENTLKTEFERPIIKSNNTKYFSKVIWTKKDSYDVSIPISLFWKSEDTDELPRRKKCILSVYGAYGKNDNSDLDEIMLSIIDAGFIYAIVHVRGGGYLGGEWYRSGKALNKWNSIRDFIEGVNYLRENDVIDSKRLGLITSSAGGIIAGAVLNEEKNLLQSILLFSPFINPYDTLQNPNDPLSKTEIAEWGDIRDPEVKAYIKSYSPMQNIEKARDSNTVIVNILGEKDPYINNNEVIEWSKKLNSIGVKSLLYLNKAAGHGGFTPSDVLLMIDTLNYFFEEVGRNNL

⊟Experimental data[edit | edit source]

  • protein localization:
  • interaction partners:

⊟Expression & Regulation[edit | edit source]

⊟Operon[edit | edit source]

⊟Regulation[edit | edit source]

  • regulator:

⊟Transcription[edit | edit source]

  • transcription start site:

⊟Expression data[edit | edit source]

⊟Biological Material[edit | edit source]

⊟Mutants[edit | edit source]

⊟Expression vector[edit | edit source]

⊟lacZ fusion[edit | edit source]

⊟GFP fusion[edit | edit source]

⊟two-hybrid system[edit | edit source]

⊟FLAG-tag construct[edit | edit source]

⊟Antibody[edit | edit source]

⊟Other Information[edit | edit source]

You can add further information about the gene and protein here. [edit]

⊟Literature[edit | edit source]

⊟References[edit | edit source]

⊟Relevant publications[edit | edit source]

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