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TIGR4
serotype 4
D39serotype 2
D39Vserotype 2
Hungary19A-6serotype 19A
EF3030serotype 19F
670-6Bserotype 6B
6A-10serotype 6A
70585serotype 5
A026serotype 19F
A66serotype 3
AP200serotype 11A
ASP0581serotype 12F
ATCC 49619serotype 19F
ATCC 700669serotype 23F
BM6001serotype 19F
BVJ1JLserotype 1
CGSP14serotype 14
G54serotype 19F
HU-OHserotype 3
Hu15serotype 19A
Hu17serotype 19A
INV104serotype 1
INV200serotype 14
JJAserotype 14
MDRSPN001serotype 19F
NCTC7465serotype 1
NCTC7466serotype 2
NU83127serotype 4
OXC141serotype 3
P1031serotype 1
R6serotype 2
SP49serotype 19A
SPN032672serotype 1
SPN034156serotype 3
SPN034183serotype 3
SPN994038serotype 3
SPN994039serotype 3
SPNA45serotype 3
ST556serotype 19F
TCH8431/19Aserotype 19A
Taiwan19F-14serotype 19F
Xen35serotype 4
gamPNI0373serotype 1
NCBI: 30-JAN-2014
⊟Summary[edit | edit source]
- organism: Streptococcus pneumoniae G54
- locus tag: SPG_0564
- pan locus tag?:
- symbol: SPG_0564
- pan gene symbol?: —
- synonym:
- product: nitroreductase
⊟Genome View[edit | edit source]
⊟Gene[edit | edit source]
⊟General[edit | edit source]
- type: CDS
- locus tag: SPG_0564
- symbol: SPG_0564
- product: nitroreductase
- replicon: chromosome
- strand: +
- coordinates: 551147..551302
- length: 156
- essential: unknown
⊟Accession numbers[edit | edit source]
- Location: CP001015 (551147..551302) NCBI
- BioCyc:
- MicrobesOnline: 5755833 MicrobesOnline
- PneumoBrowse for strain D39V:
⊟Phenotype[edit | edit source]
Share your knowledge and add information here. [edit]
⊟DNA sequence[edit | edit source]
- 1
61
121ATGAAATTTCTTGAATTAAATAAAAAACGTCATGCGACCAAGCATTTCACTGATAAGCCT
GTTGATCCAAAAGATGTGCGTACGGCTATCGAAATTGCAACCTTGGCGCCAAGCGCCCAG
CAACAGCCAGCCTTGGAAATTTGTAGTTGTTCGTGA60
120
156
⊟Protein[edit | edit source]
⊟General[edit | edit source]
- locus tag: SPG_0564
- symbol: SPG_0564
- description: nitroreductase
- length: 51
- theoretical pI: 8.80281
- theoretical MW: 5707.59
- GRAVY: -0.490196
⊟Function[edit | edit source]
- TIGRFAM: Biosynthesis of cofactors, prosthetic groups, and carriers Other F420 biosynthesis protein FbiB, C-terminal domain (TIGR03553; HMM-score: 18.5)and 1 moreBiosynthesis of cofactors, prosthetic groups, and carriers Heme, porphyrin, and cobalamin 5,6-dimethylbenzimidazole synthase (TIGR02476; EC 1.14.99.40; HMM-score: 14.6)
- TheSEED :
- Dihydropteridine reductase (EC 1.5.1.34)
- Oxygen-insensitive NAD(P)H nitroreductase (EC 1.-.-.-)
- PFAM: FMN-dep-NRtase (CL0529) Nitroreductase; Nitroreductase family (PF00881; HMM-score: 27.2)and 1 moreTM1586_NiRdase; Putative TM nitroreductase (PF14512; HMM-score: 12.6)
⊟Structure, modifications & cofactors[edit | edit source]
- domains:
- modifications:
- cofactors:
- effectors:
⊟Localization[edit | edit source]
- PSORTb: unknown (no significant prediction)
- Cytoplasmic Score: 2.5
- Cytoplasmic Membrane Score: 2.5
- Cellwall Score: 2.5
- Extracellular Score: 2.5
- Internal Helices: 0
- DeepLocPro: Cytoplasmic
- Cytoplasmic Score: 0.5874
- Cytoplasmic Membrane Score: 0.0795
- Cell wall & surface Score: 0.0013
- Extracellular Score: 0.3318
- SignalP: no predicted signal peptide
- SP(Sec/SPI): 0.179122
- TAT(Tat/SPI): 0.004609
- LIPO(Sec/SPII): 0.011473
- predicted transmembrane helices (TMHMM): 0
⊟Accession numbers[edit | edit source]
- GI:
- RefSeq: ACF55460 NCBI
- UniProt:
⊟Protein sequence[edit | edit source]
- MKFLELNKKRHATKHFTDKPVDPKDVRTAIEIATLAPSAQQQPALEICSCS
⊟Experimental data[edit | edit source]
- protein localization:
- interaction partners:
⊟Expression & Regulation[edit | edit source]
⊟Operon[edit | edit source]
⊟Regulation[edit | edit source]
- regulator:
⊟Transcription[edit | edit source]
- transcription start site:
⊟Expression data[edit | edit source]
- PneumoExpress for strain D39V:
⊟Biological Material[edit | edit source]
⊟Mutants[edit | edit source]
⊟Expression vector[edit | edit source]
⊟lacZ fusion[edit | edit source]
⊟GFP fusion[edit | edit source]
⊟two-hybrid system[edit | edit source]
⊟FLAG-tag construct[edit | edit source]
⊟Antibody[edit | edit source]
⊟Other Information[edit | edit source]
You can add further information about the gene and protein here. [edit]