TIGR4

serotype 4

D39

serotype 2

D39V

serotype 2

Hungary19A-6

serotype 19A

EF3030

serotype 19F

670-6B

serotype 6B

6A-10

serotype 6A

70585

serotype 5

A026

serotype 19F

A66

serotype 3

AP200

serotype 11A

ASP0581

serotype 12F

ATCC 49619

serotype 19F

ATCC 700669

serotype 23F

BVJ1JL

serotype 1

CGSP14

serotype 14

G54

serotype 19F

HU-OH

serotype 3

Hu15

serotype 19A

Hu17

serotype 19A

INV104

serotype 1

INV200

serotype 14

JJA

serotype 14

MDRSPN001

serotype 19F

NCTC7466

serotype 2

NU83127

serotype 4

OXC141

serotype 3

P1031

serotype 1

R6

serotype 2

SP49

serotype 19A

SPN032672

serotype 1

SPN034156

serotype 3

SPN034183

serotype 3

SPN994038

serotype 3

SPN994039

serotype 3

SPNA45

serotype 3

ST556

serotype 19F

TCH8431/19A

serotype 19A

Taiwan19F-14

serotype 19F

Xen35

serotype 4

gamPNI0373

serotype 1

NCBI: 30-JAN-2014

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⊟Summary

• organism: Streptococcus pneumoniae G54
locus tag: SPG_0639
pan locus tag^?:
symbol: SPG_0639
pan gene symbol^?: —
• synonym:
• product: ABC transporter, substrate binding protein

⊟Genome View

⊟Gene

⊟General

• type: CDS
• locus tag: SPG_0639
• symbol: SPG_0639
• product: ABC transporter, substrate binding protein
• replicon: chromosome
• strand: -
• coordinates: 630080..630193
• length: 114
• essential: unknown

⊟Accession numbers

• Location: CP001015 (630080..630193) NCBI
• BioCyc:
• MicrobesOnline: 5755908 MicrobesOnline
• PneumoBrowse for strain D39V:

⊟Phenotype

Share your knowledge and add information here. [edit]

⊟DNA sequence

• 1
  61
  
  ATGAAATCAAAAAAAAGCGGTGAACTGCGAATCGCCGTGTTTGGAGATAAAAAACCGTTT
  GGCTACGTTGACAATGATGGTTCTTACCAAGGCTACGCTACGATATTGAACTAG
  60
  114
  

⊟Protein

⊟General

• locus tag: SPG_0639
• symbol: SPG_0639
• description: ABC transporter, substrate binding protein
• length: 37
• theoretical pI: 9.63371
• theoretical MW: 4098.61
• GRAVY: -0.621622

⊟Function

• TIGRFAM:
  extracellular substrate-binding orphan protein, GRRM family (TIGR04262; HMM-score: 11.7)
  Metabolism Transport and binding proteins Amino acids, peptides and amines ectoine/hydroxyectoine ABC transporter solute-binding protein EhuB (TIGR02995; HMM-score: 11.6)
• TheSEED  :
  • ABC transporter amino acid-binding protein
• PFAM:
  PBP (CL0177) SBP_bac_3; Bacterial extracellular solute-binding proteins, family 3 (PF00497; HMM-score: 15.3)

⊟Structure, modifications & cofactors

• domains:
• modifications:
• cofactors:
• effectors:

⊟Localization

• ⊞PSORTb: unknown (no significant prediction)
  • Cytoplasmic Score: 2.5
  • Cytoplasmic Membrane Score: 2.5
  • Cellwall Score: 2.5
  • Extracellular Score: 2.5
  • Internal Helices: 0
• ⊞SignalP: no predicted signal peptide
  • SP(Sec/SPI): 0.2945
  • TAT(Tat/SPI): 0.011566
  • LIPO(Sec/SPII): 0.038458
• predicted transmembrane helices (TMHMM): 0

⊟Accession numbers

• GI:
• RefSeq: ACF55789 NCBI
• UniProt:

⊟Protein sequence

• MKSKKSGELRIAVFGDKKPFGYVDNDGSYQGYATILN

⊟Experimental data

• protein localization:
• interaction partners:

⊟Expression & Regulation

⊟Operon

• MicrobesOnline: SPG_0638 < SPG_0639 < SPG_0640 < SPG_0641

⊟Regulation

• regulator:

⊟Expression data

• PneumoExpress for strain D39V:

⊞Biological Material

⊟Mutants

⊟Expression vector

⊟lacZ fusion

⊟GFP fusion

⊟two-hybrid system

⊟FLAG-tag construct

⊟Antibody

⊞Other Information

You are kindly invited to share additional interesting facts.

⊟Literature

⊟References

⊟Relevant publications