Jump to navigation
Jump to search
PangenomeTIGR4
serotype 4
D39serotype 2
D39Vserotype 2
Hungary19A-6serotype 19A
EF3030serotype 19F
670-6Bserotype 6B
6A-10serotype 6A
70585serotype 5
A026serotype 19F
A66serotype 3
AP200serotype 11A
ASP0581serotype 12F
ATCC 49619serotype 19F
ATCC 700669serotype 23F
BM6001serotype 19F
BVJ1JLserotype 1
CGSP14serotype 14
G54serotype 19F
HU-OHserotype 3
Hu15serotype 19A
Hu17serotype 19A
INV104serotype 1
INV200serotype 14
JJAserotype 14
MDRSPN001serotype 19F
NCTC7465serotype 1
NCTC7466serotype 2
NU83127serotype 4
OXC141serotype 3
P1031serotype 1
R6serotype 2
SP49serotype 19A
SPN032672serotype 1
SPN034156serotype 3
SPN034183serotype 3
SPN994038serotype 3
SPN994039serotype 3
SPNA45serotype 3
ST556serotype 19F
TCH8431/19Aserotype 19A
Taiwan19F-14serotype 19F
Xen35serotype 4
gamPNI0373serotype 1
NCBI: 24-APR-2024
⊟Summary[edit | edit source]
- organism: Streptococcus pneumoniae G54
- locus tag: SPG_RS08755 [old locus tag: SPG_1750 ]
- pan locus tag?: PNEUPAN003387000
- symbol: SPG_RS08755
- pan gene symbol?: —
- synonym:
- product: bacteriocin immunity protein
⊟Genome View[edit | edit source]
⊟Gene[edit | edit source]
⊟General[edit | edit source]
- type: CDS
- locus tag: SPG_RS08755 [old locus tag: SPG_1750 ]
- symbol: SPG_RS08755
- product: bacteriocin immunity protein
- replicon: chromosome
- strand: -
- coordinates: 1686560..1686856
- length: 297
- essential: unknown
⊟Accession numbers[edit | edit source]
- Location: NC_011072 (1686560..1686856) NCBI
- BioCyc: SPG_RS08755 BioCyc
- MicrobesOnline: see SPG_1750
- PneumoBrowse for strain D39V: SPV_1646 PneumoBrowse
⊟Phenotype[edit | edit source]
Share your knowledge and add information here. [edit]
⊟DNA sequence[edit | edit source]
- 1
61
121
181
241ATGGTAGAACCAAACCTAGAAAGCCTTATAAAAGATCTTTACAATCATGCTCGACATGAT
TTGAGTGAAGATTTAGTTGCTGCTCTCCTAGAGACTGCTAAAAAACTGCCTACTACAAAT
GAGCAATTGCAGGCAGTTCGTCTCTCAGGCCTGGTCAATCGTGAATTGCTCCTAAATCCC
AAACATCCAGCACCTGAGTTGCTCAACTTGGCTCGCTTTATCAAAAGAGAAGAAGCCAAG
TACAGAGGAACTGCGACTTCTGCGCTTATGTATGAGGAACTCTTTAAAATGCTTTGA60
120
180
240
297
⊟Protein[edit | edit source]
⊟General[edit | edit source]
- locus tag: SPG_RS08755 [old locus tag: SPG_1750 ]
- symbol: SPG_RS08755
- description: bacteriocin immunity protein
- length: 98
- theoretical pI: 6.80612
- theoretical MW: 11197.9
- GRAVY: -0.297959
⊟Function[edit | edit source]
- TIGRFAM:
- TheSEED: see SPG_1750
- PFAM: no clan defined EntA_Immun; Enterocin A Immunity (PF08951; HMM-score: 23.5)and 1 moreMet_repress (CL0057) DUF1778; Protein of unknown function (DUF1778) (PF08681; HMM-score: 12.7)
⊟Structure, modifications & cofactors[edit | edit source]
- domains:
- modifications:
- cofactors:
- effectors:
⊟Localization[edit | edit source]
- PSORTb: unknown (no significant prediction)
- Cytoplasmic Score: 2.5
- Cytoplasmic Membrane Score: 2.5
- Cellwall Score: 2.5
- Extracellular Score: 2.5
- Internal Helices: 0
- DeepLocPro: Cytoplasmic
- Cytoplasmic Score: 0.8025
- Cytoplasmic Membrane Score: 0.0677
- Cell wall & surface Score: 0.0006
- Extracellular Score: 0.1292
- SignalP: no predicted signal peptide
- SP(Sec/SPI): 0.001507
- TAT(Tat/SPI): 0.000696
- LIPO(Sec/SPII): 0.000388
- predicted transmembrane helices (TMHMM): 0
⊟Accession numbers[edit | edit source]
- GI:
- RefSeq: WP_000230147 NCBI
- UniProt:
⊟Protein sequence[edit | edit source]
- MVEPNLESLIKDLYNHARHDLSEDLVAALLETAKKLPTTNEQLQAVRLSGLVNRELLLNPKHPAPELLNLARFIKREEAKYRGTATSALMYEELFKML
⊟Experimental data[edit | edit source]
- protein localization:
- interaction partners:
⊟Expression & Regulation[edit | edit source]
⊟Operon[edit | edit source]
⊟Regulation[edit | edit source]
- regulator:
⊟Transcription[edit | edit source]
- transcription start site:
⊟Expression data[edit | edit source]
- PneumoExpress for strain D39V: SPV_1646 PneumoExpress
⊟Biological Material[edit | edit source]
⊟Mutants[edit | edit source]
⊟Expression vector[edit | edit source]
⊟lacZ fusion[edit | edit source]
⊟GFP fusion[edit | edit source]
⊟two-hybrid system[edit | edit source]
⊟FLAG-tag construct[edit | edit source]
⊟Antibody[edit | edit source]
⊟Other Information[edit | edit source]
You can add further information about the gene and protein here. [edit]